This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ASP 1
VAL 2
0.0777
VAL 2
GLU 3
-0.1151
GLU 3
PHE 4
0.0135
PHE 4
LYS 5
-0.0997
LYS 5
CYS 6
-0.3297
CYS 6
THR 7
0.1009
THR 7
CYS 8
-0.1056
CYS 8
SER 9
0.0726
SER 9
ARG 10
0.1145
ARG 10
GLU 11
-0.1432
GLU 11
ARG 12
0.0702
ARG 12
CYS 13
-0.0059
CYS 13
ALA 14
0.0161
ALA 14
ASP 15
0.0297
ASP 15
ALA 16
0.0952
ALA 16
LEU 17
-0.0384
LEU 17
LYS 18
0.1110
LYS 18
THR 19
0.0360
THR 19
LEU 20
-0.0470
LEU 20
PRO 21
0.0453
PRO 21
ASP 22
-0.0101
ASP 22
GLU 23
-0.0360
GLU 23
GLU 24
0.0080
GLU 24
VAL 25
0.0161
VAL 25
ASP 26
-0.0060
ASP 26
SER 27
-0.0080
SER 27
ILE 28
0.0717
ILE 28
LEU 29
-0.0282
LEU 29
ALA 30
0.0076
ALA 30
GLU 31
0.0045
GLU 31
ASP 32
0.0161
ASP 32
GLY 33
0.0100
GLY 33
GLU 34
0.0088
GLU 34
ILE 35
-0.0199
ILE 35
ASP 36
0.1592
ASP 36
MET 37
-0.0504
MET 37
HIS 38
-0.0007
HIS 38
CYS 39
-0.0649
CYS 39
ASP 40
-0.0570
ASP 40
TYR 41
-0.0440
TYR 41
CYS 42
0.1646
CYS 42
GLY 43
-0.0859
GLY 43
ASN 44
-0.0267
ASN 44
HIS 45
0.0531
HIS 45
TYR 46
-0.0749
TYR 46
LEU 47
0.0466
LEU 47
PHE 48
-0.0360
PHE 48
ASN 49
-0.0079
ASN 49
ALA 50
-0.0045
ALA 50
MET 51
0.0032
MET 51
ASP 52
-0.0329
ASP 52
ILE 53
-0.0190
ILE 53
ALA 54
0.0133
ALA 54
GLU 55
0.0041
GLU 55
ILE 56
0.0416
ILE 56
ARG 57
-0.0553
ARG 57
ASN 58
-0.0181
ASN 58
ASN 59
-0.0665
ASN 59
ALA 60
0.0954
ALA 60
SER 61
-0.0449
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.