CNRS Nantes University US2B US2B
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***  CtermSwiss  ***

CA strain for 2404291504373581297

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ASP 1VAL 2 0.0777
VAL 2GLU 3 -0.1151
GLU 3PHE 4 0.0135
PHE 4LYS 5 -0.0997
LYS 5CYS 6 -0.3297
CYS 6THR 7 0.1009
THR 7CYS 8 -0.1056
CYS 8SER 9 0.0726
SER 9ARG 10 0.1145
ARG 10GLU 11 -0.1432
GLU 11ARG 12 0.0702
ARG 12CYS 13 -0.0059
CYS 13ALA 14 0.0161
ALA 14ASP 15 0.0297
ASP 15ALA 16 0.0952
ALA 16LEU 17 -0.0384
LEU 17LYS 18 0.1110
LYS 18THR 19 0.0360
THR 19LEU 20 -0.0470
LEU 20PRO 21 0.0453
PRO 21ASP 22 -0.0101
ASP 22GLU 23 -0.0360
GLU 23GLU 24 0.0080
GLU 24VAL 25 0.0161
VAL 25ASP 26 -0.0060
ASP 26SER 27 -0.0080
SER 27ILE 28 0.0717
ILE 28LEU 29 -0.0282
LEU 29ALA 30 0.0076
ALA 30GLU 31 0.0045
GLU 31ASP 32 0.0161
ASP 32GLY 33 0.0100
GLY 33GLU 34 0.0088
GLU 34ILE 35 -0.0199
ILE 35ASP 36 0.1592
ASP 36MET 37 -0.0504
MET 37HIS 38 -0.0007
HIS 38CYS 39 -0.0649
CYS 39ASP 40 -0.0570
ASP 40TYR 41 -0.0440
TYR 41CYS 42 0.1646
CYS 42GLY 43 -0.0859
GLY 43ASN 44 -0.0267
ASN 44HIS 45 0.0531
HIS 45TYR 46 -0.0749
TYR 46LEU 47 0.0466
LEU 47PHE 48 -0.0360
PHE 48ASN 49 -0.0079
ASN 49ALA 50 -0.0045
ALA 50MET 51 0.0032
MET 51ASP 52 -0.0329
ASP 52ILE 53 -0.0190
ILE 53ALA 54 0.0133
ALA 54GLU 55 0.0041
GLU 55ILE 56 0.0416
ILE 56ARG 57 -0.0553
ARG 57ASN 58 -0.0181
ASN 58ASN 59 -0.0665
ASN 59ALA 60 0.0954
ALA 60SER 61 -0.0449

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.