This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ASP 1
VAL 2
-0.0052
VAL 2
GLU 3
0.0026
GLU 3
PHE 4
-0.0397
PHE 4
LYS 5
0.0749
LYS 5
CYS 6
-0.0221
CYS 6
THR 7
0.0231
THR 7
CYS 8
0.0117
CYS 8
SER 9
0.0159
SER 9
ARG 10
0.0242
ARG 10
GLU 11
-0.0028
GLU 11
ARG 12
-0.0103
ARG 12
CYS 13
0.0031
CYS 13
ALA 14
0.0133
ALA 14
ASP 15
-0.0090
ASP 15
ALA 16
0.0031
ALA 16
LEU 17
-0.0042
LEU 17
LYS 18
0.0209
LYS 18
THR 19
0.0035
THR 19
LEU 20
0.0023
LEU 20
PRO 21
-0.0063
PRO 21
ASP 22
0.0025
ASP 22
GLU 23
0.0008
GLU 23
GLU 24
0.0008
GLU 24
VAL 25
-0.0011
VAL 25
ASP 26
0.0018
ASP 26
SER 27
-0.0024
SER 27
ILE 28
-0.0035
ILE 28
LEU 29
0.0042
LEU 29
ALA 30
0.0014
ALA 30
GLU 31
-0.0008
GLU 31
ASP 32
0.0000
ASP 32
GLY 33
0.0009
GLY 33
GLU 34
-0.0016
GLU 34
ILE 35
0.0016
ILE 35
ASP 36
-0.0148
ASP 36
MET 37
0.0055
MET 37
HIS 38
-0.0100
HIS 38
CYS 39
-0.0152
CYS 39
ASP 40
0.0148
ASP 40
TYR 41
-0.0355
TYR 41
CYS 42
0.0282
CYS 42
GLY 43
0.0048
GLY 43
ASN 44
-0.0031
ASN 44
HIS 45
0.0148
HIS 45
TYR 46
-0.0033
TYR 46
LEU 47
0.0123
LEU 47
PHE 48
-0.0009
PHE 48
ASN 49
0.0005
ASN 49
ALA 50
-0.0028
ALA 50
MET 51
0.0058
MET 51
ASP 52
0.0017
ASP 52
ILE 53
0.0042
ILE 53
ALA 54
-0.0124
ALA 54
GLU 55
0.0184
GLU 55
ILE 56
-0.0078
ILE 56
ARG 57
-0.0242
ARG 57
ASN 58
0.0299
ASN 58
ASN 59
-0.0203
ASN 59
ALA 60
-0.0207
ALA 60
SER 61
0.0928
SER 61
PRO 62
-0.0890
PRO 62
ALA 63
0.0193
ALA 63
ASP 64
0.0409
ASP 64
PRO 65
-0.0118
PRO 65
GLN 66
0.0028
GLN 66
VAL 67
0.0018
VAL 67
HIS 68
-0.0024
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.