CNRS Nantes University US2B US2B
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CA strain for 240504015352236104

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1GLU 2 -0.0216
GLU 2ALA 3 -0.1145
ALA 3GLU 4 0.1087
GLU 4SER 5 -0.1086
SER 5ALA 6 -0.0412
ALA 6LEU 7 0.0284
LEU 7GLU 8 0.0061
GLU 8TYR 9 -0.2065
TYR 9ALA 10 -0.0084
ALA 10GLN 11 0.0870
GLN 11GLN 12 -0.1682
GLN 12ALA 13 0.0595
ALA 13LEU 14 0.0227
LEU 14GLU 15 -0.0471
GLU 15LYS 16 -0.0387
LYS 16ALA 17 0.1000
ALA 17GLN 18 -0.1232
GLN 18LEU 19 -0.0295
LEU 19ALA 20 -0.0628
ALA 20LEU 21 -0.0784
LEU 21GLN 22 -0.0153
GLN 22ALA 23 0.0590
ALA 23ALA 24 -0.1034
ALA 24ARG 25 -0.0947
ARG 25GLN 26 0.0503
GLN 26ALA 27 -0.0535
ALA 27LEU 28 -0.0128
LEU 28LYS 29 0.0109
LYS 29ALA 30 -0.0776
ALA 30ALA 1 0.0379
ALA 1GLU 2 0.0271
GLU 2ALA 3 0.1067
ALA 3GLU 4 -0.1052
GLU 4SER 5 0.1098
SER 5ALA 6 0.0401
ALA 6LEU 7 -0.0260
LEU 7GLU 8 0.0192
GLU 8TYR 9 0.2029
TYR 9ALA 10 0.0109
ALA 10GLN 11 -0.0950
GLN 11GLN 12 0.1599
GLN 12ALA 13 -0.0583
ALA 13LEU 14 -0.0334
LEU 14GLU 15 0.0480
GLU 15LYS 16 0.0206
LYS 16ALA 17 -0.1350
ALA 17GLN 18 0.1415
GLN 18LEU 19 0.0237
LEU 19ALA 20 0.0608
ALA 20LEU 21 0.0610
LEU 21GLN 22 -0.0220
GLN 22ALA 23 -0.0643
ALA 23ALA 24 0.1238
ALA 24ARG 25 0.0673
ARG 25GLN 26 -0.0475
GLN 26ALA 27 0.0546
ALA 27LEU 28 0.0218
LEU 28LYS 29 -0.0017
LYS 29ALA 30 0.0865

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.