This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ALA 1
GLU 2
-0.0216
GLU 2
ALA 3
-0.1145
ALA 3
GLU 4
0.1087
GLU 4
SER 5
-0.1086
SER 5
ALA 6
-0.0412
ALA 6
LEU 7
0.0284
LEU 7
GLU 8
0.0061
GLU 8
TYR 9
-0.2065
TYR 9
ALA 10
-0.0084
ALA 10
GLN 11
0.0870
GLN 11
GLN 12
-0.1682
GLN 12
ALA 13
0.0595
ALA 13
LEU 14
0.0227
LEU 14
GLU 15
-0.0471
GLU 15
LYS 16
-0.0387
LYS 16
ALA 17
0.1000
ALA 17
GLN 18
-0.1232
GLN 18
LEU 19
-0.0295
LEU 19
ALA 20
-0.0628
ALA 20
LEU 21
-0.0784
LEU 21
GLN 22
-0.0153
GLN 22
ALA 23
0.0590
ALA 23
ALA 24
-0.1034
ALA 24
ARG 25
-0.0947
ARG 25
GLN 26
0.0503
GLN 26
ALA 27
-0.0535
ALA 27
LEU 28
-0.0128
LEU 28
LYS 29
0.0109
LYS 29
ALA 30
-0.0776
ALA 30
ALA 1
0.0379
ALA 1
GLU 2
0.0271
GLU 2
ALA 3
0.1067
ALA 3
GLU 4
-0.1052
GLU 4
SER 5
0.1098
SER 5
ALA 6
0.0401
ALA 6
LEU 7
-0.0260
LEU 7
GLU 8
0.0192
GLU 8
TYR 9
0.2029
TYR 9
ALA 10
0.0109
ALA 10
GLN 11
-0.0950
GLN 11
GLN 12
0.1599
GLN 12
ALA 13
-0.0583
ALA 13
LEU 14
-0.0334
LEU 14
GLU 15
0.0480
GLU 15
LYS 16
0.0206
LYS 16
ALA 17
-0.1350
ALA 17
GLN 18
0.1415
GLN 18
LEU 19
0.0237
LEU 19
ALA 20
0.0608
ALA 20
LEU 21
0.0610
LEU 21
GLN 22
-0.0220
GLN 22
ALA 23
-0.0643
ALA 23
ALA 24
0.1238
ALA 24
ARG 25
0.0673
ARG 25
GLN 26
-0.0475
GLN 26
ALA 27
0.0546
ALA 27
LEU 28
0.0218
LEU 28
LYS 29
-0.0017
LYS 29
ALA 30
0.0865
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.