This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ALA 1
GLU 2
0.0152
GLU 2
ALA 3
-0.1104
ALA 3
GLU 4
0.0762
GLU 4
SER 5
-0.0650
SER 5
ALA 6
-0.0672
ALA 6
LEU 7
0.0067
LEU 7
GLU 8
0.0246
GLU 8
TYR 9
-0.1769
TYR 9
ALA 10
-0.0538
ALA 10
GLN 11
-0.0066
GLN 11
GLN 12
-0.0750
GLN 12
ALA 13
0.0101
ALA 13
LEU 14
0.0553
LEU 14
GLU 15
0.0299
GLU 15
LYS 16
-0.0721
LYS 16
ALA 17
0.1104
ALA 17
GLN 18
0.0190
GLN 18
LEU 19
-0.0077
LEU 19
ALA 20
0.1637
ALA 20
LEU 21
0.1239
LEU 21
GLN 22
0.0471
GLN 22
ALA 23
0.1642
ALA 23
ALA 24
0.2493
ALA 24
ARG 25
0.2305
ARG 25
GLN 26
0.1822
GLN 26
ALA 27
0.1050
ALA 27
LEU 28
0.0061
LEU 28
LYS 29
-0.1409
LYS 29
ALA 30
0.1039
ALA 30
ALA 1
-0.0391
ALA 1
GLU 2
-0.0905
GLU 2
ALA 3
0.0716
ALA 3
GLU 4
-0.0228
GLU 4
SER 5
0.1918
SER 5
ALA 6
0.0235
ALA 6
LEU 7
0.0021
LEU 7
GLU 8
0.0004
GLU 8
TYR 9
0.1354
TYR 9
ALA 10
0.0460
ALA 10
GLN 11
-0.0264
GLN 11
GLN 12
0.0097
GLN 12
ALA 13
0.0566
ALA 13
LEU 14
-0.0200
LEU 14
GLU 15
-0.0400
GLU 15
LYS 16
0.0194
LYS 16
ALA 17
-0.0920
ALA 17
GLN 18
-0.0509
GLN 18
LEU 19
0.0310
LEU 19
ALA 20
-0.1059
ALA 20
LEU 21
-0.2364
LEU 21
GLN 22
-0.0229
GLN 22
ALA 23
-0.1666
ALA 23
ALA 24
-0.1938
ALA 24
ARG 25
-0.1102
ARG 25
GLN 26
-0.0925
GLN 26
ALA 27
-0.1160
ALA 27
LEU 28
-0.0534
LEU 28
LYS 29
0.0991
LYS 29
ALA 30
-0.1406
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.