CNRS Nantes University US2B US2B
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CA strain for 240504015825238913

---  normal mode 10  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1GLU 2 0.0152
GLU 2ALA 3 -0.1104
ALA 3GLU 4 0.0762
GLU 4SER 5 -0.0650
SER 5ALA 6 -0.0672
ALA 6LEU 7 0.0067
LEU 7GLU 8 0.0246
GLU 8TYR 9 -0.1769
TYR 9ALA 10 -0.0538
ALA 10GLN 11 -0.0066
GLN 11GLN 12 -0.0750
GLN 12ALA 13 0.0101
ALA 13LEU 14 0.0553
LEU 14GLU 15 0.0299
GLU 15LYS 16 -0.0721
LYS 16ALA 17 0.1104
ALA 17GLN 18 0.0190
GLN 18LEU 19 -0.0077
LEU 19ALA 20 0.1637
ALA 20LEU 21 0.1239
LEU 21GLN 22 0.0471
GLN 22ALA 23 0.1642
ALA 23ALA 24 0.2493
ALA 24ARG 25 0.2305
ARG 25GLN 26 0.1822
GLN 26ALA 27 0.1050
ALA 27LEU 28 0.0061
LEU 28LYS 29 -0.1409
LYS 29ALA 30 0.1039
ALA 30ALA 1 -0.0391
ALA 1GLU 2 -0.0905
GLU 2ALA 3 0.0716
ALA 3GLU 4 -0.0228
GLU 4SER 5 0.1918
SER 5ALA 6 0.0235
ALA 6LEU 7 0.0021
LEU 7GLU 8 0.0004
GLU 8TYR 9 0.1354
TYR 9ALA 10 0.0460
ALA 10GLN 11 -0.0264
GLN 11GLN 12 0.0097
GLN 12ALA 13 0.0566
ALA 13LEU 14 -0.0200
LEU 14GLU 15 -0.0400
GLU 15LYS 16 0.0194
LYS 16ALA 17 -0.0920
ALA 17GLN 18 -0.0509
GLN 18LEU 19 0.0310
LEU 19ALA 20 -0.1059
ALA 20LEU 21 -0.2364
LEU 21GLN 22 -0.0229
GLN 22ALA 23 -0.1666
ALA 23ALA 24 -0.1938
ALA 24ARG 25 -0.1102
ARG 25GLN 26 -0.0925
GLN 26ALA 27 -0.1160
ALA 27LEU 28 -0.0534
LEU 28LYS 29 0.0991
LYS 29ALA 30 -0.1406

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.