CNRS Nantes University US2B US2B
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CA strain for 240504015825238913

---  normal mode 7  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1GLU 2 -0.0070
GLU 2ALA 3 -0.0117
ALA 3GLU 4 0.0260
GLU 4SER 5 -0.0514
SER 5ALA 6 0.0004
ALA 6LEU 7 0.0316
LEU 7GLU 8 0.0008
GLU 8TYR 9 -0.0466
TYR 9ALA 10 -0.0033
ALA 10GLN 11 0.0559
GLN 11GLN 12 -0.0816
GLN 12ALA 13 0.0113
ALA 13LEU 14 0.0768
LEU 14GLU 15 -0.0318
GLU 15LYS 16 -0.0386
LYS 16ALA 17 0.0649
ALA 17GLN 18 0.0197
GLN 18LEU 19 -0.1229
LEU 19ALA 20 0.0522
ALA 20LEU 21 0.0716
LEU 21GLN 22 -0.0299
GLN 22ALA 23 -0.0356
ALA 23ALA 24 0.0574
ALA 24ARG 25 0.0122
ARG 25GLN 26 -0.0153
GLN 26ALA 27 0.0195
ALA 27LEU 28 0.0070
LEU 28LYS 29 -0.0201
LYS 29ALA 30 0.0157
ALA 30ALA 1 -0.0153
ALA 1GLU 2 0.0014
GLU 2ALA 3 -0.0068
ALA 3GLU 4 0.0191
GLU 4SER 5 -0.0620
SER 5ALA 6 0.0167
ALA 6LEU 7 0.0369
LEU 7GLU 8 -0.0077
GLU 8TYR 9 -0.0373
TYR 9ALA 10 0.0109
ALA 10GLN 11 0.0483
GLN 11GLN 12 -0.0398
GLN 12ALA 13 -0.0011
ALA 13LEU 14 0.0469
LEU 14GLU 15 -0.0099
GLU 15LYS 16 0.0007
LYS 16ALA 17 0.0536
ALA 17GLN 18 0.0877
GLN 18LEU 19 -0.0975
LEU 19ALA 20 0.0297
ALA 20LEU 21 0.0823
LEU 21GLN 22 -0.0433
GLN 22ALA 23 -0.0546
ALA 23ALA 24 0.0502
ALA 24ARG 25 0.0281
ARG 25GLN 26 -0.0343
GLN 26ALA 27 0.0170
ALA 27LEU 28 0.0057
LEU 28LYS 29 -0.0119
LYS 29ALA 30 0.0171

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.