CNRS Nantes University US2B US2B
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CA strain for 240504015825238913

---  normal mode 8  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1GLU 2 -0.0024
GLU 2ALA 3 0.0573
ALA 3GLU 4 -0.0278
GLU 4SER 5 -0.0131
SER 5ALA 6 0.0555
ALA 6LEU 7 0.0040
LEU 7GLU 8 -0.0018
GLU 8TYR 9 0.0341
TYR 9ALA 10 0.0740
ALA 10GLN 11 0.0172
GLN 11GLN 12 0.0026
GLN 12ALA 13 0.0366
ALA 13LEU 14 0.1381
LEU 14GLU 15 0.0329
GLU 15LYS 16 0.0416
LYS 16ALA 17 0.0936
ALA 17GLN 18 -0.0526
GLN 18LEU 19 0.0177
LEU 19ALA 20 0.1106
ALA 20LEU 21 0.0674
LEU 21GLN 22 0.0012
GLN 22ALA 23 0.1043
ALA 23ALA 24 0.0486
ALA 24ARG 25 0.0588
ARG 25GLN 26 0.0685
GLN 26ALA 27 0.0352
ALA 27LEU 28 -0.0175
LEU 28LYS 29 -0.0676
LYS 29ALA 30 0.0417
ALA 30ALA 1 -0.0291
ALA 1GLU 2 -0.0215
GLU 2ALA 3 0.0462
ALA 3GLU 4 -0.0151
GLU 4SER 5 0.0125
SER 5ALA 6 0.0470
ALA 6LEU 7 0.0164
LEU 7GLU 8 0.0114
GLU 8TYR 9 0.0416
TYR 9ALA 10 0.0823
ALA 10GLN 11 0.0241
GLN 11GLN 12 -0.0237
GLN 12ALA 13 0.1001
ALA 13LEU 14 0.1445
LEU 14GLU 15 0.0164
GLU 15LYS 16 0.0697
LYS 16ALA 17 0.1534
ALA 17GLN 18 -0.0451
GLN 18LEU 19 0.0120
LEU 19ALA 20 0.0621
ALA 20LEU 21 0.1779
LEU 21GLN 22 0.0139
GLN 22ALA 23 0.0959
ALA 23ALA 24 0.0211
ALA 24ARG 25 0.0271
ARG 25GLN 26 0.0325
GLN 26ALA 27 0.0414
ALA 27LEU 28 -0.0022
LEU 28LYS 29 -0.0319
LYS 29ALA 30 0.0445

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.