CNRS Nantes University US2B US2B
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CA strain for 240504015825238913

---  normal mode 9  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
ALA 1GLU 2 0.0524
GLU 2ALA 3 0.1093
ALA 3GLU 4 -0.0991
GLU 4SER 5 0.0634
SER 5ALA 6 0.0522
ALA 6LEU 7 -0.0644
LEU 7GLU 8 0.0213
GLU 8TYR 9 0.1546
TYR 9ALA 10 0.0135
ALA 10GLN 11 -0.0530
GLN 11GLN 12 0.2072
GLN 12ALA 13 -0.0377
ALA 13LEU 14 -0.0555
LEU 14GLU 15 0.0250
GLU 15LYS 16 0.0110
LYS 16ALA 17 -0.0658
ALA 17GLN 18 0.1261
GLN 18LEU 19 0.0090
LEU 19ALA 20 0.0444
ALA 20LEU 21 0.0849
LEU 21GLN 22 0.0135
GLN 22ALA 23 -0.0779
ALA 23ALA 24 0.1372
ALA 24ARG 25 0.1027
ARG 25GLN 26 -0.0486
GLN 26ALA 27 0.0602
ALA 27LEU 28 0.0386
LEU 28LYS 29 -0.0466
LYS 29ALA 30 0.0629
ALA 30ALA 1 0.0398
ALA 1GLU 2 -0.0194
GLU 2ALA 3 -0.0954
ALA 3GLU 4 0.0913
GLU 4SER 5 -0.1307
SER 5ALA 6 -0.0271
ALA 6LEU 7 0.0473
LEU 7GLU 8 -0.0404
GLU 8TYR 9 -0.1712
TYR 9ALA 10 -0.0215
ALA 10GLN 11 0.0533
GLN 11GLN 12 -0.1025
GLN 12ALA 13 0.0260
ALA 13LEU 14 0.0113
LEU 14GLU 15 -0.0438
GLU 15LYS 16 -0.0252
LYS 16ALA 17 0.1058
ALA 17GLN 18 -0.1271
GLN 18LEU 19 -0.0446
LEU 19ALA 20 -0.0602
ALA 20LEU 21 -0.0547
LEU 21GLN 22 0.0100
GLN 22ALA 23 0.0587
ALA 23ALA 24 -0.1379
ALA 24ARG 25 -0.1099
ARG 25GLN 26 0.0574
GLN 26ALA 27 -0.0517
ALA 27LEU 28 -0.0148
LEU 28LYS 29 0.0371
LYS 29ALA 30 -0.0762

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.