This graph displays the distance variation between successive pairs of CA atoms
in the two extreme conformations that were computed for this mode (DQMIN/DQMAX).
Large distance variations can be an indicator for residue pairs that support the
important strain in that particular normal mode movement.
Note that residue pairs between chain breaks or at flexible ends of the protein
may also exhibit large CA-CA distance variations.
If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations
between CA atoms in the same block will be very low.
This feature is still experimental and will be further developped in the future.
CA i
CA i+1
vari
ALA 1
GLU 2
0.0524
GLU 2
ALA 3
0.1093
ALA 3
GLU 4
-0.0991
GLU 4
SER 5
0.0634
SER 5
ALA 6
0.0522
ALA 6
LEU 7
-0.0644
LEU 7
GLU 8
0.0213
GLU 8
TYR 9
0.1546
TYR 9
ALA 10
0.0135
ALA 10
GLN 11
-0.0530
GLN 11
GLN 12
0.2072
GLN 12
ALA 13
-0.0377
ALA 13
LEU 14
-0.0555
LEU 14
GLU 15
0.0250
GLU 15
LYS 16
0.0110
LYS 16
ALA 17
-0.0658
ALA 17
GLN 18
0.1261
GLN 18
LEU 19
0.0090
LEU 19
ALA 20
0.0444
ALA 20
LEU 21
0.0849
LEU 21
GLN 22
0.0135
GLN 22
ALA 23
-0.0779
ALA 23
ALA 24
0.1372
ALA 24
ARG 25
0.1027
ARG 25
GLN 26
-0.0486
GLN 26
ALA 27
0.0602
ALA 27
LEU 28
0.0386
LEU 28
LYS 29
-0.0466
LYS 29
ALA 30
0.0629
ALA 30
ALA 1
0.0398
ALA 1
GLU 2
-0.0194
GLU 2
ALA 3
-0.0954
ALA 3
GLU 4
0.0913
GLU 4
SER 5
-0.1307
SER 5
ALA 6
-0.0271
ALA 6
LEU 7
0.0473
LEU 7
GLU 8
-0.0404
GLU 8
TYR 9
-0.1712
TYR 9
ALA 10
-0.0215
ALA 10
GLN 11
0.0533
GLN 11
GLN 12
-0.1025
GLN 12
ALA 13
0.0260
ALA 13
LEU 14
0.0113
LEU 14
GLU 15
-0.0438
GLU 15
LYS 16
-0.0252
LYS 16
ALA 17
0.1058
ALA 17
GLN 18
-0.1271
GLN 18
LEU 19
-0.0446
LEU 19
ALA 20
-0.0602
ALA 20
LEU 21
-0.0547
LEU 21
GLN 22
0.0100
GLN 22
ALA 23
0.0587
ALA 23
ALA 24
-0.1379
ALA 24
ARG 25
-0.1099
ARG 25
GLN 26
0.0574
GLN 26
ALA 27
-0.0517
ALA 27
LEU 28
-0.0148
LEU 28
LYS 29
0.0371
LYS 29
ALA 30
-0.0762
If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Last modification: April 25th, 2023.