CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 26-OCT-20 7DCE  ***

<R2> analysis for 2603031115043683922

---  normal mode 47  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0562
GLY 1030.0043
PRO 1040.0043
PRO 1050.0027
ARG 1060.0028
VAL 1070.0028
LYS 1080.0034
ALA 1090.0030
VAL 1100.0031
LYS 1110.0033
SER 1120.0038
SER 1130.0042
GLU 1140.0035
HIS 1150.0033
ILE 1160.0029
ASN 1170.0032
GLU 1180.0031
GLY 1190.0036
GLU 1200.0035
THR 1210.0036
ALA 1220.0035
MET 1230.0026
LEU 1240.0028
VAL 1250.0024
CYS 1260.0023
LYS 1270.0021
SER 1280.0018
GLU 1290.0012
SER 1300.0008
VAL 1310.0025
PRO 1320.0035
PRO 1330.0013
VAL 1340.0009
THR 1350.0013
ASP 1360.0012
TRP 1370.0018
ALA 1380.0043
TRP 1390.0039
TYR 1400.0036
LYS 1410.0035
ILE 1420.0027
THR 1430.0042
ASP 1440.0083
SER 1450.0113
GLU 1460.0077
ASP 1470.0052
LYS 1480.0062
ALA 1490.0055
LEU 1500.0054
MET 1510.0059
GLN 1520.0054
GLY 1530.0072
SER 1540.0072
GLU 1550.0080
SER 1560.0081
ARG 1570.0066
PHE 1580.0043
PHE 1590.0031
VAL 1600.0022
SER 1610.0013
SER 1620.0010
SER 1630.0013
GLN 1640.0012
GLY 1650.0010
ARG 1660.0015
SER 1670.0018
GLU 1680.0020
LEU 1690.0027
HIS 1700.0031
ILE 1710.0041
GLU 1720.0046
ASN 1730.0050
LEU 1740.0036
ASN 1750.0030
MET 1760.0025
GLU 1770.0018
ALA 1780.0034
ASP 1790.0037
PRO 1800.0034
GLY 1810.0033
GLN 1820.0036
TYR 1830.0039
ARG 1840.0035
CYS 1850.0031
GLN 1860.0028
GLY 1870.0024
THR 1880.0026
SER 1890.0027
SER 1900.0048
LYS 1910.0055
GLY 1920.0053
SER 1930.0029
ASP 1940.0030
GLN 1950.0035
ALA 1960.0037
ILE 1970.0045
ILE 1980.0041
THR 1990.0039
LEU 2000.0034
ARG 2010.0034
VAL 2020.0032
ARG 2030.0042
SER 2040.0082
HIS 2050.0111
LEU 2060.0124
ALA 2070.0085
ALA 2080.0104
LEU 2090.0099
TRP 2100.0077
PRO 2110.0074
PHE 2120.0090
LEU 2130.0102
GLY 2140.0090
ILE 2150.0112
VAL 2160.0120
ALA 2170.0100
GLU 2180.0129
VAL 2190.0142
LEU 2200.0130
VAL 2210.0102
LEU 2220.0105
VAL 2230.0164
THR 2240.0154
ILE 2250.0066
ILE 2260.0058
PHE 2270.0147
ILE 2280.0221
TYR 2290.0150
GLU 2300.0171
LYS 2310.0274
ARG 2320.0373
ARG 2330.0344
LYS 2340.0304
GLY 70.0562
ALA 80.0421
LEU 90.0282
LEU 100.0443
ARG 110.0448
ASP 120.0238
LEU 130.0299
VAL 140.0342
LEU 150.0259
GLY 160.0232
VAL 170.0229
LEU 180.0198
GLY 190.0166
THR 200.0200
ALA 210.0216
ALA 220.0105
PHE 230.0127
LEU 240.0135
LEU 250.0111
ASP 260.0110
LEU 270.0145
GLY 280.0157
THR 290.0121
ASP 300.0120
LEU 310.0171
TRP 320.0215
ALA 330.0121
ALA 340.0142
VAL 350.0209
GLN 360.0177
TYR 370.0092
ALA 380.0129
LEU 390.0245
GLY 400.0255
GLY 410.0188
ARG 420.0232
TYR 430.0216
LEU 440.0339
TRP 450.0219
ALA 460.0190
ALA 470.0310
LEU 480.0294
VAL 490.0194
LEU 500.0284
ALA 510.0363
LEU 520.0177
LEU 530.0163
GLY 540.0205
LEU 550.0190
ALA 560.0136
SER 570.0121
VAL 580.0117
ALA 590.0108
LEU 600.0107
GLN 610.0109
LEU 620.0099
PHE 630.0084
SER 640.0074
TRP 650.0089
LEU 660.0090
TRP 670.0056
LEU 680.0053
ARG 690.0068
ALA 700.0064
ASP 710.0050
PRO 720.0300
ALA 730.0317
GLY 740.0249
LEU 750.0154
HIS 760.0181
GLY 770.0093
SER 780.0161
GLN 790.0267
PRO 800.0328
PRO 810.0392
ARG 820.0295
ARG 830.0330
CYS 840.0277
LEU 850.0212
ALA 860.0271
LEU 870.0276
LEU 880.0173
HIS 890.0186
LEU 900.0275
LEU 910.0221
GLN 920.0173
LEU 930.0117
GLY 940.0088
TYR 950.0067
LEU 960.0063
TYR 970.0103
ARG 980.0092
CYS 990.0111
VAL 1000.0116
GLN 1010.0096
GLU 1020.0163
LEU 1030.0152
ARG 1040.0157
GLN 1050.0168
GLY 1060.0163
LEU 1070.0296
LEU 1080.0255
VAL 1090.0209
TRP 1100.0247
GLN 1110.0254
GLN 1120.0225
GLU 1130.0406
GLU 1140.0421
PRO 1150.0272
SER 1160.0280
GLU 1170.0322
PHE 1180.0283
ASP 1190.0204
LEU 1200.0267
ALA 1210.0329
TYR 1220.0174
ALA 1230.0168
ASP 1240.0149
PHE 1250.0148
LEU 1260.0155
ALA 1270.0066
LEU 1280.0046
ASP 1290.0062
ILE 1300.0062
SER 1310.0042
MET 1320.0015
LEU 1330.0012
ARG 1340.0026
LEU 1350.0010
PHE 1360.0025
GLU 1370.0026
THR 1380.0011
PHE 1390.0023
LEU 1400.0035
GLU 1410.0023
THR 1420.0021
ALA 1430.0033
PRO 1440.0054
GLN 1450.0043
LEU 1460.0041
THR 1470.0070
LEU 1480.0091
VAL 1490.0082
LEU 1500.0088
ALA 1510.0113
ILE 1520.0137
MET 1530.0139
LEU 1540.0140
GLN 1550.0157
SER 1560.0178
GLY 1570.0203
ARG 1580.0149
ALA 1590.0129
GLU 1600.0107
TYR 1610.0142
TYR 1620.0108
GLN 1630.0082
TRP 1640.0107
VAL 1650.0104
GLY 1660.0067
ILE 1670.0067
CYS 1680.0068
THR 1690.0064
SER 1700.0047
PHE 1710.0041
LEU 1720.0071
GLY 1730.0082
ILE 1740.0065
SER 1750.0039
TRP 1760.0050
ALA 1770.0067
LEU 1780.0059
LEU 1790.0052
ASP 1800.0053
TYR 1810.0048
HIS 1820.0080
ARG 1830.0097
ALA 1840.0089
LEU 1850.0071
ARG 1860.0079
THR 1870.0123
CYS 1880.0123
LEU 1890.0131
PRO 1900.0151
SER 1910.0140
LYS 1920.0194
PRO 1930.0270
LEU 1940.0465
LEU 1950.0392
GLY 1960.0227
LEU 1970.0157
GLY 1980.0146
SER 1990.0116
SER 2000.0104
VAL 2010.0101
ILE 2020.0112
TYR 2030.0113
PHE 2040.0113
LEU 2050.0114
TRP 2060.0115
ASN 2070.0106
LEU 2080.0106
LEU 2090.0104
LEU 2100.0101
LEU 2110.0102
TRP 2120.0076
PRO 2130.0068
ARG 2140.0084
VAL 2150.0085
LEU 2160.0065
ALA 2170.0061
VAL 2180.0081
ALA 2190.0074
LEU 2200.0060
PHE 2210.0074
SER 2220.0088
ALA 2230.0082
LEU 2240.0075
PHE 2250.0095
PRO 2260.0120
SER 2270.0171
TYR 2280.0145
VAL 2290.0142
ALA 2300.0187
LEU 2310.0180
HIS 2320.0142
PHE 2330.0161
LEU 2340.0179
GLY 2350.0159
LEU 2360.0152
TRP 2370.0156
LEU 2380.0146
VAL 2390.0135
LEU 2400.0140
LEU 2410.0141
LEU 2420.0108
TRP 2430.0089
VAL 2440.0120
TRP 2450.0096
LEU 2460.0055
GLN 2470.0090
GLY 2480.0085
THR 2490.0076
ASP 2500.0071
PHE 2510.0063
MET 2520.0028
PRO 2530.0020
ASP 2540.0024
PRO 2550.0032
SER 2560.0037
SER 2570.0062
GLU 2580.0067
TRP 2590.0076
LEU 2600.0084
TYR 2610.0084
ARG 2620.0114
VAL 2630.0123
THR 2640.0129
VAL 2650.0134
ALA 2660.0144
THR 2670.0144
ILE 2680.0145
LEU 2690.0139
TYR 2700.0137
PHE 2710.0139
SER 2720.0142
TRP 2730.0136
PHE 2740.0136
ASN 2750.0128
VAL 2760.0120
ALA 2770.0123
GLU 2780.0116
GLY 2790.0159
ARG 2800.0153
THR 2810.0180
ARG 2820.0160
GLY 2830.0143
ARG 2840.0135
ALA 2850.0149
ILE 2860.0146
ILE 2870.0101
HIS 2880.0125
PHE 2890.0144
ALA 2900.0111
PHE 2910.0110
LEU 2920.0127
LEU 2930.0116
SER 2940.0106
ASP 2950.0114
SER 2960.0120
ILE 2970.0082
LEU 2980.0078
LEU 2990.0081
VAL 3000.0071
ALA 3010.0066
THR 3020.0053
TRP 3030.0049
VAL 3040.0050
THR 3050.0051
HIS 3060.0059
SER 3070.0052
SER 3080.0056
TRP 3090.0058
LEU 3100.0075
PRO 3110.0091
SER 3120.0077
GLY 3130.0123
ILE 3140.0125
PRO 3150.0099
LEU 3160.0050
GLN 3170.0061
LEU 3180.0087
TRP 3190.0054
LEU 3200.0035
PRO 3210.0084
VAL 3220.0056
GLY 3230.0067
CYS 3240.0083
GLY 3250.0078
CYS 3260.0080
PHE 3270.0102
PHE 3280.0101
LEU 3290.0110
GLY 3300.0122
LEU 3310.0123
ALA 3320.0132
LEU 3330.0149
ARG 3340.0143
LEU 3350.0145
VAL 3360.0163
TYR 3370.0168
TYR 3380.0149
HIS 3390.0163
TRP 3400.0170
LEU 3410.0159
HIS 3420.0131
PRO 3430.0103
SER 3440.0111
CYS 3450.0101
LEU 3680.0403
PRO 3690.0296
GLN 3700.0195
ASN 3710.0081
ARG 3720.0070
ARG 3730.0056
MET 3740.0044
THR 3750.0056
HIS 3760.0079
LEU 3770.0087
ALA 3780.0095
GLN 3790.0098
LYS 3800.0104
PHE 3810.0105
PHE 3820.0102
PRO 3830.0099
SER 20.0053
VAL 30.0048
GLU 40.0045
GLU 50.0039
SER 60.0038
GLY 70.0050
GLY 80.0037
ARG 90.0043
LEU 100.0049
VAL 110.0050
THR 120.0060
PRO 130.0052
GLY 140.0038
THR 150.0036
PRO 160.0031
LEU 170.0032
THR 180.0038
LEU 190.0038
THR 200.0044
CYS 210.0048
THR 220.0047
VAL 230.0048
SER 240.0053
GLY 250.0055
PHE 260.0050
SER 270.0037
LEU 280.0038
SER 290.0035
ASP 300.0033
TYR 310.0036
ALA 320.0039
MET 330.0038
ASN 340.0037
TRP 350.0035
VAL 360.0036
ARG 370.0030
GLN 380.0028
ALA 390.0025
PRO 400.0022
GLY 410.0025
LYS 420.0023
GLY 430.0027
LEU 440.0028
GLU 450.0028
TRP 460.0032
ILE 470.0038
GLY 480.0036
ILE 490.0034
ILE 500.0033
TYR 510.0031
ALA 520.0031
SER 530.0030
GLY 540.0035
SER 550.0034
ARG 560.0039
TYR 570.0037
TYR 580.0040
ALA 590.0040
SER 600.0043
TRP 610.0047
ALA 620.0053
LYS 630.0057
GLY 640.0056
ARG 650.0052
PHE 660.0049
THR 670.0047
ILE 680.0046
SER 690.0045
LYS 700.0045
THR 710.0045
SER 720.0045
THR 730.0047
THR 740.0048
VAL 750.0047
ASP 760.0048
LEU 770.0048
LYS 780.0043
ILE 790.0039
THR 800.0039
SER 810.0038
PRO 820.0033
THR 830.0052
THR 840.0063
GLU 850.0063
ASP 860.0041
THR 870.0032
ALA 880.0027
THR 890.0022
TYR 900.0027
PHE 910.0035
CYS 920.0038
ALA 930.0036
ARG 940.0032
TYR 950.0029
TYR 960.0028
ALA 970.0023
GLY 980.0023
SER 990.0023
ASP 1000.0028
ILE 1010.0028
TRP 1020.0032
GLY 1030.0031
PRO 1040.0032
GLY 1050.0026
THR 1060.0025
LEU 1070.0026
VAL 1080.0026
THR 1090.0036
VAL 1100.0043
SER 1110.0063
SER 1120.0086
ALA 1130.0076
SER 1140.0075
THR 1150.0063
LYS 1160.0058
GLY 1170.0036
PRO 1180.0030
SER 1190.0016
VAL 1200.0013
PHE 1210.0023
PRO 1220.0012
LEU 1230.0016
ALA 1240.0021
PRO 1250.0031
SER 1260.0043
SER 1270.0023
GLY 1330.0119
THR 1340.0090
ALA 1350.0068
ALA 1360.0042
LEU 1370.0018
GLY 1380.0016
CYS 1390.0012
LEU 1400.0017
VAL 1410.0016
LYS 1420.0021
ASP 1430.0026
TYR 1440.0033
PHE 1450.0043
PRO 1460.0047
GLU 1470.0042
PRO 1480.0037
VAL 1490.0030
THR 1500.0031
VAL 1510.0025
SER 1520.0027
TRP 1530.0027
ASN 1540.0032
SER 1550.0033
GLY 1560.0034
ALA 1570.0040
LEU 1580.0036
THR 1590.0030
SER 1600.0035
GLY 1610.0029
VAL 1620.0015
HIS 1630.0028
THR 1640.0023
PHE 1650.0019
PRO 1660.0019
ALA 1670.0015
VAL 1680.0017
LEU 1690.0030
GLN 1700.0029
SER 1710.0045
SER 1720.0047
GLY 1730.0044
LEU 1740.0036
TYR 1750.0030
SER 1760.0019
LEU 1770.0015
SER 1780.0016
SER 1790.0009
VAL 1800.0016
VAL 1810.0021
THR 1820.0030
VAL 1830.0070
PRO 1840.0110
SER 1850.0121
SER 1860.0147
SER 1870.0119
LEU 1880.0088
GLY 1890.0091
THR 1900.0104
GLN 1910.0093
THR 1920.0072
TYR 1930.0038
ILE 1940.0031
CYS 1950.0029
ASN 1960.0030
VAL 1970.0021
ASN 1980.0042
HIS 1990.0045
LYS 2000.0049
PRO 2010.0051
SER 2020.0047
ASN 2030.0048
THR 2040.0037
LYS 2050.0035
VAL 2060.0026
ASP 2070.0028
LYS 2080.0017
LYS 2090.0018
VAL 2100.0014
GLU 2110.0013
PRO 2120.0023
LYS 2130.0022
SER 2140.0059
ALA 10.0037
ASP 20.0030
VAL 30.0024
VAL 40.0022
MET 50.0014
THR 60.0008
GLN 70.0009
THR 80.0009
PRO 90.0010
SER 100.0009
SER 110.0011
VAL 120.0023
SER 130.0030
ALA 140.0051
ALA 150.0061
VAL 160.0083
GLY 170.0106
GLY 180.0093
THR 190.0084
VAL 200.0056
THR 210.0018
ILE 220.0018
ASN 230.0017
CYS 240.0016
GLN 250.0016
ALA 260.0018
SER 270.0020
GLN 280.0022
SER 290.0022
ILE 300.0021
SER 310.0023
ALA 320.0017
TYR 330.0014
LEU 340.0012
ALA 350.0008
TRP 360.0010
TYR 370.0017
GLN 380.0022
GLN 390.0028
LYS 400.0034
PRO 410.0041
GLY 420.0037
GLN 430.0034
PRO 440.0026
PRO 450.0027
LYS 460.0033
LEU 470.0025
LEU 480.0019
ILE 490.0013
TYR 500.0009
ASP 510.0013
ALA 520.0018
SER 530.0032
ASP 540.0030
LEU 550.0047
ALA 560.0056
SER 570.0086
GLY 580.0113
VAL 590.0095
SER 600.0111
SER 610.0102
ARG 620.0092
PHE 630.0064
LYS 640.0059
GLY 650.0036
SER 660.0022
GLY 670.0019
SER 680.0015
GLY 690.0019
THR 700.0013
GLN 710.0017
PHE 720.0016
THR 730.0021
LEU 740.0023
THR 750.0029
ILE 760.0070
SER 770.0094
ALA 780.0107
LEU 790.0083
GLU 800.0094
CYS 810.0064
ALA 820.0081
ASP 830.0063
ALA 840.0042
ALA 850.0044
THR 860.0022
TYR 870.0015
TYR 880.0009
CYS 890.0008
GLN 900.0012
SER 910.0025
TYR 920.0018
TYR 930.0019
ALA 940.0016
ILE 950.0017
ILE 960.0013
THR 970.0019
TYR 980.0024
GLY 990.0023
ALA 1000.0024
ALA 1010.0024
PHE 1020.0018
GLY 1030.0015
GLY 1040.0014
GLY 1050.0013
THR 1060.0013
GLU 1070.0019
VAL 1080.0025
VAL 1090.0024
VAL 1100.0035
LYS 1110.0021
ARG 1120.0031
THR 1130.0033
VAL 1140.0043
ALA 1150.0061
ALA 1160.0070
PRO 1170.0056
SER 1180.0043
VAL 1190.0033
PHE 1200.0028
ILE 1210.0019
PHE 1220.0016
PRO 1230.0023
PRO 1240.0034
SER 1250.0035
ASP 1260.0060
GLU 1270.0062
GLN 1280.0061
LEU 1290.0075
LYS 1300.0088
SER 1310.0090
GLY 1320.0088
THR 1330.0074
ALA 1340.0055
SER 1350.0045
VAL 1360.0025
VAL 1370.0026
CYS 1380.0028
LEU 1390.0031
LEU 1400.0035
ASN 1410.0045
ASN 1420.0046
PHE 1430.0042
TYR 1440.0039
PRO 1450.0034
ARG 1460.0030
GLU 1470.0029
ALA 1480.0034
LYS 1490.0033
VAL 1500.0037
GLN 1510.0042
TRP 1520.0036
LYS 1530.0033
VAL 1540.0032
ASP 1550.0034
ASN 1560.0041
ALA 1570.0048
LEU 1580.0054
GLN 1590.0054
SER 1600.0067
GLY 1610.0053
ASN 1620.0052
SER 1630.0040
GLN 1640.0031
GLU 1650.0020
SER 1660.0027
VAL 1670.0028
THR 1680.0029
GLU 1690.0030
GLN 1700.0031
ASP 1710.0063
SER 1720.0069
LYS 1730.0065
ASP 1740.0047
CYS 1750.0039
THR 1760.0042
TYR 1770.0036
SER 1780.0035
LEU 1790.0029
SER 1800.0027
SER 1810.0032
THR 1820.0036
LEU 1830.0040
THR 1840.0048
LEU 1850.0054
SER 1860.0084
LYS 1870.0074
ALA 1880.0063
ASP 1890.0055
TYR 1900.0045
GLU 1910.0032
LYS 1920.0017
HIS 1930.0019
LYS 1940.0016
VAL 1950.0018
TYR 1960.0020
ALA 1970.0026
CYS 1980.0031
GLU 1990.0035
VAL 2000.0040
THR 2010.0054
HIS 2020.0051
GLN 2030.0057
GLY 2040.0069
LEU 2050.0081
SER 2060.0163
SER 2070.0135
PRO 2080.0091
VAL 2090.0075
THR 2100.0045
LYS 2110.0034
SER 2120.0018
PHE 2130.0017
ASN 2140.0029
ARG 2150.0039
GLY 2160.0089
GLU 2170.0149

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.