CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 26-OCT-20 7DCE  ***

<R2> analysis for 2603031115043683922

---  normal mode 58  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0404
GLY 1030.0289
PRO 1040.0282
PRO 1050.0155
ARG 1060.0153
VAL 1070.0064
LYS 1080.0105
ALA 1090.0087
VAL 1100.0077
LYS 1110.0075
SER 1120.0091
SER 1130.0058
GLU 1140.0044
HIS 1150.0051
ILE 1160.0051
ASN 1170.0081
GLU 1180.0088
GLY 1190.0104
GLU 1200.0072
THR 1210.0029
ALA 1220.0028
MET 1230.0065
LEU 1240.0072
VAL 1250.0084
CYS 1260.0093
LYS 1270.0108
SER 1280.0117
GLU 1290.0185
SER 1300.0128
VAL 1310.0106
PRO 1320.0099
PRO 1330.0119
VAL 1340.0123
THR 1350.0212
ASP 1360.0222
TRP 1370.0172
ALA 1380.0081
TRP 1390.0064
TYR 1400.0046
LYS 1410.0039
ILE 1420.0038
THR 1430.0034
ASP 1440.0063
SER 1450.0062
GLU 1460.0030
ASP 1470.0034
LYS 1480.0056
ALA 1490.0097
LEU 1500.0082
MET 1510.0135
GLN 1520.0139
GLY 1530.0148
SER 1540.0172
GLU 1550.0182
SER 1560.0147
ARG 1570.0100
PHE 1580.0070
PHE 1590.0061
VAL 1600.0098
SER 1610.0115
SER 1620.0165
SER 1630.0159
GLN 1640.0190
GLY 1650.0179
ARG 1660.0146
SER 1670.0111
GLU 1680.0099
LEU 1690.0072
HIS 1700.0036
ILE 1710.0019
GLU 1720.0040
ASN 1730.0099
LEU 1740.0084
ASN 1750.0114
MET 1760.0120
GLU 1770.0132
ALA 1780.0092
ASP 1790.0066
PRO 1800.0057
GLY 1810.0048
GLN 1820.0056
TYR 1830.0041
ARG 1840.0027
CYS 1850.0049
GLN 1860.0068
GLY 1870.0091
THR 1880.0211
SER 1890.0199
SER 1900.0305
LYS 1910.0298
GLY 1920.0306
SER 1930.0189
ASP 1940.0131
GLN 1950.0077
ALA 1960.0021
ILE 1970.0040
ILE 1980.0060
THR 1990.0041
LEU 2000.0032
ARG 2010.0045
VAL 2020.0066
ARG 2030.0081
SER 2040.0129
HIS 2050.0161
LEU 2060.0149
ALA 2070.0090
ALA 2080.0154
LEU 2090.0157
TRP 2100.0135
PRO 2110.0150
PHE 2120.0161
LEU 2130.0141
GLY 2140.0112
ILE 2150.0136
VAL 2160.0168
ALA 2170.0151
GLU 2180.0142
VAL 2190.0124
LEU 2200.0126
VAL 2210.0133
LEU 2220.0122
VAL 2230.0058
THR 2240.0065
ILE 2250.0058
ILE 2260.0091
PHE 2270.0096
ILE 2280.0159
TYR 2290.0140
GLU 2300.0279
LYS 2310.0353
ARG 2320.0385
ARG 2330.0293
LYS 2340.0398
GLY 70.0080
ALA 80.0066
LEU 90.0051
LEU 100.0051
ARG 110.0053
ASP 120.0041
LEU 130.0040
VAL 140.0038
LEU 150.0038
GLY 160.0041
VAL 170.0048
LEU 180.0056
GLY 190.0043
THR 200.0033
ALA 210.0047
ALA 220.0067
PHE 230.0057
LEU 240.0033
LEU 250.0041
ASP 260.0061
LEU 270.0091
GLY 280.0054
THR 290.0045
ASP 300.0070
LEU 310.0062
TRP 320.0097
ALA 330.0038
ALA 340.0048
VAL 350.0135
GLN 360.0123
TYR 370.0162
ALA 380.0223
LEU 390.0388
GLY 400.0388
GLY 410.0382
ARG 420.0181
TYR 430.0088
LEU 440.0102
TRP 450.0093
ALA 460.0056
ALA 470.0120
LEU 480.0162
VAL 490.0129
LEU 500.0160
ALA 510.0230
LEU 520.0151
LEU 530.0124
GLY 540.0153
LEU 550.0168
ALA 560.0135
SER 570.0114
VAL 580.0128
ALA 590.0123
LEU 600.0101
GLN 610.0105
LEU 620.0065
PHE 630.0067
SER 640.0064
TRP 650.0055
LEU 660.0050
TRP 670.0040
LEU 680.0040
ARG 690.0023
ALA 700.0036
ASP 710.0051
PRO 720.0117
ALA 730.0114
GLY 740.0116
LEU 750.0113
HIS 760.0103
GLY 770.0152
SER 780.0148
GLN 790.0157
PRO 800.0158
PRO 810.0122
ARG 820.0139
ARG 830.0149
CYS 840.0165
LEU 850.0140
ALA 860.0108
LEU 870.0126
LEU 880.0117
HIS 890.0124
LEU 900.0150
LEU 910.0153
GLN 920.0141
LEU 930.0113
GLY 940.0090
TYR 950.0067
LEU 960.0050
TYR 970.0044
ARG 980.0043
CYS 990.0036
VAL 1000.0038
GLN 1010.0044
GLU 1020.0045
LEU 1030.0030
ARG 1040.0031
GLN 1050.0044
GLY 1060.0039
LEU 1070.0041
LEU 1080.0055
VAL 1090.0062
TRP 1100.0054
GLN 1110.0055
GLN 1120.0118
GLU 1130.0113
GLU 1140.0054
PRO 1150.0084
SER 1160.0115
GLU 1170.0133
PHE 1180.0121
ASP 1190.0078
LEU 1200.0086
ALA 1210.0105
TYR 1220.0050
ALA 1230.0052
ASP 1240.0066
PHE 1250.0058
LEU 1260.0050
ALA 1270.0044
LEU 1280.0041
ASP 1290.0037
ILE 1300.0040
SER 1310.0040
MET 1320.0017
LEU 1330.0014
ARG 1340.0017
LEU 1350.0023
PHE 1360.0022
GLU 1370.0053
THR 1380.0060
PHE 1390.0077
LEU 1400.0080
GLU 1410.0079
THR 1420.0102
ALA 1430.0128
PRO 1440.0122
GLN 1450.0095
LEU 1460.0109
THR 1470.0124
LEU 1480.0103
VAL 1490.0119
LEU 1500.0118
ALA 1510.0086
ILE 1520.0094
MET 1530.0132
LEU 1540.0102
GLN 1550.0086
SER 1560.0129
GLY 1570.0132
ARG 1580.0171
ALA 1590.0177
GLU 1600.0204
TYR 1610.0242
TYR 1620.0158
GLN 1630.0148
TRP 1640.0196
VAL 1650.0203
GLY 1660.0167
ILE 1670.0146
CYS 1680.0165
THR 1690.0167
SER 1700.0157
PHE 1710.0168
LEU 1720.0106
GLY 1730.0107
ILE 1740.0110
SER 1750.0094
TRP 1760.0086
ALA 1770.0077
LEU 1780.0080
LEU 1790.0080
ASP 1800.0068
TYR 1810.0063
HIS 1820.0083
ARG 1830.0055
ALA 1840.0051
LEU 1850.0066
ARG 1860.0062
THR 1870.0077
CYS 1880.0075
LEU 1890.0125
PRO 1900.0178
SER 1910.0168
LYS 1920.0210
PRO 1930.0133
LEU 1940.0115
LEU 1950.0125
GLY 1960.0113
LEU 1970.0112
GLY 1980.0113
SER 1990.0114
SER 2000.0114
VAL 2010.0123
ILE 2020.0122
TYR 2030.0123
PHE 2040.0125
LEU 2050.0131
TRP 2060.0135
ASN 2070.0124
LEU 2080.0124
LEU 2090.0131
LEU 2100.0124
LEU 2110.0116
TRP 2120.0145
PRO 2130.0103
ARG 2140.0099
VAL 2150.0088
LEU 2160.0066
ALA 2170.0053
VAL 2180.0065
ALA 2190.0051
LEU 2200.0037
PHE 2210.0046
SER 2220.0052
ALA 2230.0042
LEU 2240.0061
PHE 2250.0078
PRO 2260.0069
SER 2270.0131
TYR 2280.0136
VAL 2290.0128
ALA 2300.0163
LEU 2310.0179
HIS 2320.0125
PHE 2330.0130
LEU 2340.0132
GLY 2350.0125
LEU 2360.0124
TRP 2370.0101
LEU 2380.0074
VAL 2390.0082
LEU 2400.0098
LEU 2410.0076
LEU 2420.0058
TRP 2430.0099
VAL 2440.0124
TRP 2450.0111
LEU 2460.0127
GLN 2470.0163
GLY 2480.0151
THR 2490.0126
ASP 2500.0117
PHE 2510.0101
MET 2520.0095
PRO 2530.0096
ASP 2540.0080
PRO 2550.0091
SER 2560.0072
SER 2570.0058
GLU 2580.0066
TRP 2590.0049
LEU 2600.0050
TYR 2610.0069
ARG 2620.0054
VAL 2630.0047
THR 2640.0067
VAL 2650.0078
ALA 2660.0069
THR 2670.0057
ILE 2680.0064
LEU 2690.0063
TYR 2700.0071
PHE 2710.0083
SER 2720.0088
TRP 2730.0075
PHE 2740.0074
ASN 2750.0084
VAL 2760.0080
ALA 2770.0150
GLU 2780.0170
GLY 2790.0179
ARG 2800.0200
THR 2810.0201
ARG 2820.0167
GLY 2830.0149
ARG 2840.0155
ALA 2850.0163
ILE 2860.0150
ILE 2870.0101
HIS 2880.0100
PHE 2890.0115
ALA 2900.0109
PHE 2910.0097
LEU 2920.0121
LEU 2930.0128
SER 2940.0133
ASP 2950.0120
SER 2960.0115
ILE 2970.0102
LEU 2980.0121
LEU 2990.0092
VAL 3000.0074
ALA 3010.0106
THR 3020.0107
TRP 3030.0086
VAL 3040.0115
THR 3050.0147
HIS 3060.0139
SER 3070.0151
SER 3080.0163
TRP 3090.0139
LEU 3100.0137
PRO 3110.0159
SER 3120.0216
GLY 3130.0210
ILE 3140.0211
PRO 3150.0231
LEU 3160.0184
GLN 3170.0261
LEU 3180.0271
TRP 3190.0206
LEU 3200.0128
PRO 3210.0167
VAL 3220.0161
GLY 3230.0127
CYS 3240.0080
GLY 3250.0121
CYS 3260.0168
PHE 3270.0114
PHE 3280.0122
LEU 3290.0152
GLY 3300.0153
LEU 3310.0144
ALA 3320.0161
LEU 3330.0158
ARG 3340.0140
LEU 3350.0146
VAL 3360.0157
TYR 3370.0159
TYR 3380.0143
HIS 3390.0163
TRP 3400.0168
LEU 3410.0151
HIS 3420.0189
PRO 3430.0176
SER 3440.0258
CYS 3450.0240
LEU 3680.0146
PRO 3690.0104
GLN 3700.0102
ASN 3710.0071
ARG 3720.0082
ARG 3730.0066
MET 3740.0064
THR 3750.0063
HIS 3760.0069
LEU 3770.0073
ALA 3780.0075
GLN 3790.0073
LYS 3800.0089
PHE 3810.0107
PHE 3820.0107
PRO 3830.0128
SER 20.0068
VAL 30.0063
GLU 40.0082
GLU 50.0091
SER 60.0112
GLY 70.0128
GLY 80.0079
ARG 90.0077
LEU 100.0079
VAL 110.0125
THR 120.0178
PRO 130.0173
GLY 140.0171
THR 150.0158
PRO 160.0112
LEU 170.0058
THR 180.0061
LEU 190.0063
THR 200.0078
CYS 210.0084
THR 220.0067
VAL 230.0032
SER 240.0037
GLY 250.0069
PHE 260.0083
SER 270.0111
LEU 280.0088
SER 290.0130
ASP 300.0132
TYR 310.0087
ALA 320.0038
MET 330.0029
ASN 340.0032
TRP 350.0047
VAL 360.0060
ARG 370.0065
GLN 380.0082
ALA 390.0077
PRO 400.0096
GLY 410.0118
LYS 420.0103
GLY 430.0092
LEU 440.0075
GLU 450.0058
TRP 460.0042
ILE 470.0046
GLY 480.0039
ILE 490.0038
ILE 500.0059
TYR 510.0067
ALA 520.0108
SER 530.0130
GLY 540.0117
SER 550.0104
ARG 560.0084
TYR 570.0063
TYR 580.0063
ALA 590.0055
SER 600.0062
TRP 610.0071
ALA 620.0090
LYS 630.0098
GLY 640.0093
ARG 650.0082
PHE 660.0073
THR 670.0093
ILE 680.0078
SER 690.0092
LYS 700.0090
THR 710.0107
SER 720.0091
THR 730.0061
THR 740.0062
VAL 750.0056
ASP 760.0088
LEU 770.0075
LYS 780.0048
ILE 790.0041
THR 800.0051
SER 810.0076
PRO 820.0085
THR 830.0124
THR 840.0132
GLU 850.0125
ASP 860.0075
THR 870.0019
ALA 880.0037
THR 890.0058
TYR 900.0064
PHE 910.0089
CYS 920.0072
ALA 930.0039
ARG 940.0018
TYR 950.0036
TYR 960.0077
ALA 970.0066
GLY 980.0065
SER 990.0049
ASP 1000.0043
ILE 1010.0023
TRP 1020.0067
GLY 1030.0075
PRO 1040.0089
GLY 1050.0084
THR 1060.0088
LEU 1070.0065
VAL 1080.0030
THR 1090.0040
VAL 1100.0092
SER 1110.0136
SER 1120.0169
ALA 1130.0106
SER 1140.0071
THR 1150.0036
LYS 1160.0049
GLY 1170.0063
PRO 1180.0057
SER 1190.0064
VAL 1200.0052
PHE 1210.0057
PRO 1220.0018
LEU 1230.0019
ALA 1240.0019
PRO 1250.0025
SER 1260.0043
SER 1270.0032
GLY 1330.0076
THR 1340.0067
ALA 1350.0048
ALA 1360.0046
LEU 1370.0023
GLY 1380.0027
CYS 1390.0036
LEU 1400.0047
VAL 1410.0055
LYS 1420.0075
ASP 1430.0117
TYR 1440.0066
PHE 1450.0049
PRO 1460.0058
GLU 1470.0072
PRO 1480.0058
VAL 1490.0037
THR 1500.0029
VAL 1510.0026
SER 1520.0022
TRP 1530.0042
ASN 1540.0057
SER 1550.0067
GLY 1560.0067
ALA 1570.0071
LEU 1580.0041
THR 1590.0047
SER 1600.0048
GLY 1610.0042
VAL 1620.0024
HIS 1630.0046
THR 1640.0019
PHE 1650.0018
PRO 1660.0038
ALA 1670.0061
VAL 1680.0146
LEU 1690.0225
GLN 1700.0261
SER 1710.0369
SER 1720.0365
GLY 1730.0222
LEU 1740.0160
TYR 1750.0120
SER 1760.0095
LEU 1770.0048
SER 1780.0013
SER 1790.0008
VAL 1800.0021
VAL 1810.0027
THR 1820.0044
VAL 1830.0066
PRO 1840.0071
SER 1850.0031
SER 1860.0085
SER 1870.0104
LEU 1880.0071
GLY 1890.0129
THR 1900.0163
GLN 1910.0128
THR 1920.0097
TYR 1930.0049
ILE 1940.0041
CYS 1950.0033
ASN 1960.0029
VAL 1970.0021
ASN 1980.0017
HIS 1990.0019
LYS 2000.0055
PRO 2010.0051
SER 2020.0039
ASN 2030.0062
THR 2040.0044
LYS 2050.0035
VAL 2060.0040
ASP 2070.0043
LYS 2080.0047
LYS 2090.0045
VAL 2100.0032
GLU 2110.0038
PRO 2120.0039
LYS 2130.0014
SER 2140.0126
ALA 10.0056
ASP 20.0049
VAL 30.0074
VAL 40.0093
MET 50.0103
THR 60.0120
GLN 70.0083
THR 80.0070
PRO 90.0060
SER 100.0079
SER 110.0059
VAL 120.0086
SER 130.0115
ALA 140.0148
ALA 150.0174
VAL 160.0120
GLY 170.0160
GLY 180.0188
THR 190.0175
VAL 200.0128
THR 210.0045
ILE 220.0040
ASN 230.0062
CYS 240.0091
GLN 250.0128
ALA 260.0110
SER 270.0116
GLN 280.0119
SER 290.0122
ILE 300.0107
SER 310.0120
ALA 320.0112
TYR 330.0085
LEU 340.0079
ALA 350.0067
TRP 360.0048
TYR 370.0034
GLN 380.0048
GLN 390.0073
LYS 400.0102
PRO 410.0169
GLY 420.0164
GLN 430.0131
PRO 440.0087
PRO 450.0069
LYS 460.0063
LEU 470.0049
LEU 480.0043
ILE 490.0053
TYR 500.0084
ASP 510.0105
ALA 520.0081
SER 530.0074
ASP 540.0087
LEU 550.0083
ALA 560.0166
SER 570.0232
GLY 580.0255
VAL 590.0198
SER 600.0200
SER 610.0180
ARG 620.0155
PHE 630.0094
LYS 640.0072
GLY 650.0047
SER 660.0076
GLY 670.0101
SER 680.0121
GLY 690.0143
THR 700.0141
GLN 710.0131
PHE 720.0093
THR 730.0058
LEU 740.0044
THR 750.0065
ILE 760.0128
SER 770.0172
ALA 780.0177
LEU 790.0130
GLU 800.0104
CYS 810.0071
ALA 820.0051
ASP 830.0059
ALA 840.0050
ALA 850.0061
THR 860.0079
TYR 870.0051
TYR 880.0050
CYS 890.0056
GLN 900.0063
SER 910.0075
TYR 920.0059
TYR 930.0066
ALA 940.0048
ILE 950.0034
ILE 960.0015
THR 970.0021
TYR 980.0040
GLY 990.0032
ALA 1000.0041
ALA 1010.0064
PHE 1020.0056
GLY 1030.0067
GLY 1040.0082
GLY 1050.0069
THR 1060.0059
GLU 1070.0051
VAL 1080.0049
VAL 1090.0074
VAL 1100.0102
LYS 1110.0170
ARG 1120.0186
THR 1130.0244
VAL 1140.0277
ALA 1150.0276
ALA 1160.0149
PRO 1170.0117
SER 1180.0120
VAL 1190.0080
PHE 1200.0104
ILE 1210.0039
PHE 1220.0033
PRO 1230.0035
PRO 1240.0031
SER 1250.0034
ASP 1260.0061
GLU 1270.0073
GLN 1280.0055
LEU 1290.0046
LYS 1300.0070
SER 1310.0070
GLY 1320.0046
THR 1330.0046
ALA 1340.0032
SER 1350.0040
VAL 1360.0056
VAL 1370.0047
CYS 1380.0042
LEU 1390.0055
LEU 1400.0062
ASN 1410.0145
ASN 1420.0168
PHE 1430.0168
TYR 1440.0181
PRO 1450.0179
ARG 1460.0151
GLU 1470.0135
ALA 1480.0085
LYS 1490.0048
VAL 1500.0028
GLN 1510.0071
TRP 1520.0048
LYS 1530.0045
VAL 1540.0025
ASP 1550.0030
ASN 1560.0064
ALA 1570.0065
LEU 1580.0083
GLN 1590.0074
SER 1600.0095
GLY 1610.0042
ASN 1620.0060
SER 1630.0041
GLN 1640.0022
GLU 1650.0014
SER 1660.0059
VAL 1670.0060
THR 1680.0051
GLU 1690.0050
GLN 1700.0070
ASP 1710.0136
SER 1720.0160
LYS 1730.0231
ASP 1740.0234
CYS 1750.0159
THR 1760.0166
TYR 1770.0126
SER 1780.0105
LEU 1790.0074
SER 1800.0058
SER 1810.0037
THR 1820.0041
LEU 1830.0039
THR 1840.0044
LEU 1850.0045
SER 1860.0072
LYS 1870.0057
ALA 1880.0093
ASP 1890.0094
TYR 1900.0060
GLU 1910.0104
LYS 1920.0123
HIS 1930.0082
LYS 1940.0074
VAL 1950.0050
TYR 1960.0040
ALA 1970.0052
CYS 1980.0037
GLU 1990.0072
VAL 2000.0061
THR 2010.0048
HIS 2020.0100
GLN 2030.0164
GLY 2040.0175
LEU 2050.0102
SER 2060.0172
SER 2070.0194
PRO 2080.0152
VAL 2090.0131
THR 2100.0126
LYS 2110.0115
SER 2120.0083
PHE 2130.0082
ASN 2140.0079
ARG 2150.0088
GLY 2160.0263
GLU 2170.0404

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.