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elNémo has been hacked on november 27th.
It has been moved away and runs again.
**Still some additional cleaning from time to time**
Sorry for the inconvenience.


***  TRANSPORT PROTEIN 26-OCT-20 7DCE  ***

<R2> analysis for 2603031115043683922

---  normal mode 8  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0280
GLY 1030.0134
PRO 1040.0124
PRO 1050.0109
ARG 1060.0097
VAL 1070.0083
LYS 1080.0069
ALA 1090.0054
VAL 1100.0045
LYS 1110.0036
SER 1120.0042
SER 1130.0035
GLU 1140.0020
HIS 1150.0015
ILE 1160.0018
ASN 1170.0031
GLU 1180.0041
GLY 1190.0054
GLU 1200.0046
THR 1210.0044
ALA 1220.0034
MET 1230.0038
LEU 1240.0039
VAL 1250.0049
CYS 1260.0060
LYS 1270.0068
SER 1280.0081
GLU 1290.0089
SER 1300.0104
VAL 1310.0116
PRO 1320.0121
PRO 1330.0106
VAL 1340.0103
THR 1350.0110
ASP 1360.0105
TRP 1370.0092
ALA 1380.0089
TRP 1390.0075
TYR 1400.0072
LYS 1410.0059
ILE 1420.0057
THR 1430.0055
ASP 1440.0057
SER 1450.0073
GLU 1460.0077
ASP 1470.0076
LYS 1480.0078
ALA 1490.0085
LEU 1500.0078
MET 1510.0092
GLN 1520.0091
GLY 1530.0095
SER 1540.0088
GLU 1550.0086
SER 1560.0090
ARG 1570.0074
PHE 1580.0071
PHE 1590.0074
VAL 1600.0076
SER 1610.0076
SER 1620.0083
SER 1630.0084
GLN 1640.0091
GLY 1650.0084
ARG 1660.0072
SER 1670.0069
GLU 1680.0059
LEU 1690.0057
HIS 1700.0054
ILE 1710.0051
GLU 1720.0056
ASN 1730.0057
LEU 1740.0039
ASN 1750.0039
MET 1760.0026
GLU 1770.0027
ALA 1780.0037
ASP 1790.0033
PRO 1800.0020
GLY 1810.0028
GLN 1820.0042
TYR 1830.0051
ARG 1840.0065
CYS 1850.0072
GLN 1860.0088
GLY 1870.0096
THR 1880.0111
SER 1890.0118
SER 1900.0134
LYS 1910.0135
GLY 1920.0127
SER 1930.0113
ASP 1940.0100
GLN 1950.0086
ALA 1960.0071
ILE 1970.0059
ILE 1980.0045
THR 1990.0034
LEU 2000.0020
ARG 2010.0012
VAL 2020.0016
ARG 2030.0037
SER 2040.0051
HIS 2050.0074
LEU 2060.0086
ALA 2070.0080
ALA 2080.0080
LEU 2090.0101
TRP 2100.0107
PRO 2110.0105
PHE 2120.0122
LEU 2130.0144
GLY 2140.0138
ILE 2150.0135
VAL 2160.0161
ALA 2170.0175
GLU 2180.0165
VAL 2190.0168
LEU 2200.0199
VAL 2210.0200
LEU 2220.0181
VAL 2230.0200
THR 2240.0225
ILE 2250.0211
ILE 2260.0197
PHE 2270.0226
ILE 2280.0244
TYR 2290.0221
GLU 2300.0218
LYS 2310.0246
ARG 2320.0267
ARG 2330.0252
LYS 2340.0228
GLY 70.0182
ALA 80.0153
LEU 90.0171
LEU 100.0187
ARG 110.0159
ASP 120.0144
LEU 130.0171
VAL 140.0174
LEU 150.0141
GLY 160.0141
VAL 170.0168
LEU 180.0150
GLY 190.0125
THR 200.0147
ALA 210.0160
ALA 220.0130
PHE 230.0122
LEU 240.0151
LEU 250.0146
ASP 260.0116
LEU 270.0129
GLY 280.0149
THR 290.0129
ASP 300.0112
LEU 310.0139
TRP 320.0143
ALA 330.0116
ALA 340.0121
VAL 350.0147
GLN 360.0134
TYR 370.0113
ALA 380.0136
LEU 390.0152
GLY 400.0129
GLY 410.0116
ARG 420.0105
TYR 430.0123
LEU 440.0108
TRP 450.0089
ALA 460.0116
ALA 470.0128
LEU 480.0104
VAL 490.0101
LEU 500.0131
ALA 510.0132
LEU 520.0107
LEU 530.0119
GLY 540.0146
LEU 550.0137
ALA 560.0114
SER 570.0139
VAL 580.0161
ALA 590.0141
LEU 600.0129
GLN 610.0161
LEU 620.0169
PHE 630.0141
SER 640.0149
TRP 650.0181
LEU 660.0173
TRP 670.0151
LEU 680.0175
ARG 690.0197
ALA 700.0176
ASP 710.0164
PRO 720.0176
ALA 730.0192
GLY 740.0180
LEU 750.0187
HIS 760.0217
GLY 770.0225
SER 780.0233
GLN 790.0265
PRO 800.0268
PRO 810.0275
ARG 820.0261
ARG 830.0280
CYS 840.0269
LEU 850.0236
ALA 860.0244
LEU 870.0261
LEU 880.0234
HIS 890.0210
LEU 900.0232
LEU 910.0232
GLN 920.0198
LEU 930.0196
GLY 940.0177
TYR 950.0151
LEU 960.0173
TYR 970.0188
ARG 980.0158
CYS 990.0158
VAL 1000.0190
GLN 1010.0183
GLU 1020.0160
LEU 1030.0183
ARG 1040.0207
GLN 1050.0188
GLY 1060.0178
LEU 1070.0211
LEU 1080.0221
VAL 1090.0199
TRP 1100.0208
GLN 1110.0240
GLN 1120.0234
GLU 1130.0234
GLU 1140.0203
PRO 1150.0192
SER 1160.0168
GLU 1170.0134
PHE 1180.0138
ASP 1190.0158
LEU 1200.0138
ALA 1210.0111
TYR 1220.0132
ALA 1230.0135
ASP 1240.0103
PHE 1250.0100
LEU 1260.0122
ALA 1270.0105
LEU 1280.0076
ASP 1290.0094
ILE 1300.0103
SER 1310.0073
MET 1320.0063
LEU 1330.0087
ARG 1340.0075
LEU 1350.0046
PHE 1360.0066
GLU 1370.0077
THR 1380.0052
PHE 1390.0042
LEU 1400.0071
GLU 1410.0075
THR 1420.0058
ALA 1430.0032
PRO 1440.0047
GLN 1450.0058
LEU 1460.0039
THR 1470.0021
LEU 1480.0039
VAL 1490.0045
LEU 1500.0030
ALA 1510.0019
ILE 1520.0032
MET 1530.0041
LEU 1540.0029
GLN 1550.0016
SER 1560.0031
GLY 1570.0040
ARG 1580.0058
ALA 1590.0077
GLU 1600.0097
TYR 1610.0122
TYR 1620.0116
GLN 1630.0089
TRP 1640.0099
VAL 1650.0115
GLY 1660.0095
ILE 1670.0077
CYS 1680.0101
THR 1690.0101
SER 1700.0072
PHE 1710.0074
LEU 1720.0096
GLY 1730.0081
ILE 1740.0055
SER 1750.0077
TRP 1760.0086
ALA 1770.0059
LEU 1780.0045
LEU 1790.0071
ASP 1800.0067
TYR 1810.0037
HIS 1820.0047
ARG 1830.0063
ALA 1840.0043
LEU 1850.0025
ARG 1860.0046
THR 1870.0050
CYS 1880.0026
LEU 1890.0031
PRO 1900.0054
SER 1910.0078
LYS 1920.0103
PRO 1930.0124
LEU 1940.0138
LEU 1950.0136
GLY 1960.0105
LEU 1970.0117
GLY 1980.0132
SER 1990.0107
SER 2000.0088
VAL 2010.0110
ILE 2020.0113
TYR 2030.0082
PHE 2040.0078
LEU 2050.0101
TRP 2060.0097
ASN 2070.0066
LEU 2080.0064
LEU 2090.0089
LEU 2100.0082
LEU 2110.0052
TRP 2120.0053
PRO 2130.0067
ARG 2140.0056
VAL 2150.0031
LEU 2160.0042
ALA 2170.0054
VAL 2180.0046
ALA 2190.0028
LEU 2200.0038
PHE 2210.0051
SER 2220.0042
ALA 2230.0028
LEU 2240.0040
PHE 2250.0056
PRO 2260.0057
SER 2270.0080
TYR 2280.0087
VAL 2290.0080
ALA 2300.0101
LEU 2310.0114
HIS 2320.0108
PHE 2330.0101
LEU 2340.0130
GLY 2350.0142
LEU 2360.0126
TRP 2370.0128
LEU 2380.0160
VAL 2390.0162
LEU 2400.0138
LEU 2410.0151
LEU 2420.0180
TRP 2430.0166
VAL 2440.0151
TRP 2450.0181
LEU 2460.0194
GLN 2470.0170
GLY 2480.0163
THR 2490.0146
ASP 2500.0140
PHE 2510.0114
MET 2520.0132
PRO 2530.0158
ASP 2540.0183
PRO 2550.0192
SER 2560.0211
SER 2570.0185
GLU 2580.0165
TRP 2590.0173
LEU 2600.0149
TYR 2610.0126
ARG 2620.0136
VAL 2630.0132
THR 2640.0101
VAL 2650.0096
ALA 2660.0111
THR 2670.0087
ILE 2680.0064
LEU 2690.0081
TYR 2700.0077
PHE 2710.0051
SER 2720.0058
TRP 2730.0075
PHE 2740.0067
ASN 2750.0088
VAL 2760.0103
ALA 2770.0115
GLU 2780.0129
GLY 2790.0124
ARG 2800.0152
THR 2810.0145
ARG 2820.0164
GLY 2830.0174
ARG 2840.0151
ALA 2850.0135
ILE 2860.0159
ILE 2870.0160
HIS 2880.0128
PHE 2890.0128
ALA 2900.0150
PHE 2910.0135
LEU 2920.0106
LEU 2930.0120
SER 2940.0135
ASP 2950.0112
SER 2960.0093
ILE 2970.0110
LEU 2980.0110
LEU 2990.0083
VAL 3000.0083
ALA 3010.0100
THR 3020.0081
TRP 3030.0067
VAL 3040.0083
THR 3050.0084
HIS 3060.0063
SER 3070.0057
SER 3080.0048
TRP 3090.0036
LEU 3100.0031
PRO 3110.0033
SER 3120.0053
GLY 3130.0056
ILE 3140.0065
PRO 3150.0082
LEU 3160.0076
GLN 3170.0101
LEU 3180.0108
TRP 3190.0089
LEU 3200.0091
PRO 3210.0115
VAL 3220.0115
GLY 3230.0098
CYS 3240.0123
GLY 3250.0135
CYS 3260.0115
PHE 3270.0115
PHE 3280.0145
LEU 3290.0142
GLY 3300.0116
LEU 3310.0134
ALA 3320.0158
LEU 3330.0139
ARG 3340.0123
LEU 3350.0152
VAL 3360.0156
TYR 3370.0127
TYR 3380.0132
HIS 3390.0162
TRP 3400.0159
LEU 3410.0130
HIS 3420.0112
PRO 3430.0107
SER 3440.0122
CYS 3450.0099
LEU 3680.0110
PRO 3690.0114
GLN 3700.0085
ASN 3710.0083
ARG 3720.0088
ARG 3730.0083
MET 3740.0052
THR 3750.0050
HIS 3760.0074
LEU 3770.0059
ALA 3780.0041
GLN 3790.0065
LYS 3800.0085
PHE 3810.0071
PHE 3820.0078
PRO 3830.0105
SER 20.0079
VAL 30.0080
GLU 40.0081
GLU 50.0082
SER 60.0091
GLY 70.0096
GLY 80.0083
ARG 90.0088
LEU 100.0096
VAL 110.0112
THR 120.0124
PRO 130.0129
GLY 140.0140
THR 150.0137
PRO 160.0132
LEU 170.0117
THR 180.0114
LEU 190.0100
THR 200.0102
CYS 210.0092
THR 220.0100
VAL 230.0096
SER 240.0101
GLY 250.0103
PHE 260.0102
SER 270.0111
LEU 280.0105
SER 290.0109
ASP 300.0100
TYR 310.0087
ALA 320.0081
MET 330.0078
ASN 340.0069
TRP 350.0071
VAL 360.0061
ARG 370.0063
GLN 380.0055
ALA 390.0062
PRO 400.0056
GLY 410.0049
LYS 420.0049
GLY 430.0043
LEU 440.0044
GLU 450.0057
TRP 460.0059
ILE 470.0074
GLY 480.0077
ILE 490.0077
ILE 500.0089
TYR 510.0088
ALA 520.0098
SER 530.0106
GLY 540.0108
SER 550.0100
ARG 560.0096
TYR 570.0086
TYR 580.0086
ALA 590.0078
SER 600.0085
TRP 610.0089
ALA 620.0094
LYS 630.0104
GLY 640.0116
ARG 650.0112
PHE 660.0106
THR 670.0111
ILE 680.0105
SER 690.0114
LYS 700.0115
THR 710.0126
SER 720.0127
THR 730.0117
THR 740.0110
VAL 750.0103
ASP 760.0108
LEU 770.0103
LYS 780.0115
ILE 790.0114
THR 800.0129
SER 810.0129
PRO 820.0116
THR 830.0116
THR 840.0109
GLU 850.0099
ASP 860.0094
THR 870.0084
ALA 880.0071
THR 890.0062
TYR 900.0068
PHE 910.0061
CYS 920.0071
ALA 930.0064
ARG 940.0069
TYR 950.0062
TYR 960.0062
ALA 970.0047
GLY 980.0041
SER 990.0047
ASP 1000.0049
ILE 1010.0059
TRP 1020.0054
GLY 1030.0061
PRO 1040.0057
GLY 1050.0061
THR 1060.0070
LEU 1070.0067
VAL 1080.0084
THR 1090.0088
VAL 1100.0105
SER 1110.0112
SER 1120.0124
ALA 1130.0105
SER 1140.0091
THR 1150.0068
LYS 1160.0053
GLY 1170.0028
PRO 1180.0025
SER 1190.0044
VAL 1200.0056
PHE 1210.0084
PRO 1220.0103
LEU 1230.0119
ALA 1240.0142
PRO 1250.0156
SER 1260.0177
SER 1270.0204
GLY 1330.0202
THR 1340.0175
ALA 1350.0164
ALA 1360.0138
LEU 1370.0123
GLY 1380.0097
CYS 1390.0078
LEU 1400.0072
VAL 1410.0047
LYS 1420.0061
ASP 1430.0061
TYR 1440.0044
PHE 1450.0057
PRO 1460.0062
GLU 1470.0048
PRO 1480.0033
VAL 1490.0009
THR 1500.0024
VAL 1510.0040
SER 1520.0066
TRP 1530.0090
ASN 1540.0111
SER 1550.0104
GLY 1560.0100
ALA 1570.0124
LEU 1580.0114
THR 1590.0097
SER 1600.0108
GLY 1610.0102
VAL 1620.0081
HIS 1630.0066
THR 1640.0046
PHE 1650.0052
PRO 1660.0044
ALA 1670.0054
VAL 1680.0081
LEU 1690.0095
GLN 1700.0108
SER 1710.0130
SER 1720.0116
GLY 1730.0106
LEU 1740.0080
TYR 1750.0066
SER 1760.0062
LEU 1770.0056
SER 1780.0065
SER 1790.0062
VAL 1800.0088
VAL 1810.0103
THR 1820.0127
VAL 1830.0148
PRO 1840.0176
SER 1850.0189
SER 1860.0207
SER 1870.0187
LEU 1880.0177
GLY 1890.0198
THR 1900.0199
GLN 1910.0173
THR 1920.0151
TYR 1930.0127
ILE 1940.0104
CYS 1950.0079
ASN 1960.0063
VAL 1970.0036
ASN 1980.0030
HIS 1990.0023
LYS 2000.0050
PRO 2010.0060
SER 2020.0047
ASN 2030.0050
THR 2040.0026
LYS 2050.0041
VAL 2060.0044
ASP 2070.0070
LYS 2080.0080
LYS 2090.0107
VAL 2100.0118
GLU 2110.0144
PRO 2120.0165
LYS 2130.0179
SER 2140.0205
ALA 10.0065
ASP 20.0058
VAL 30.0047
VAL 40.0046
MET 50.0035
THR 60.0035
GLN 70.0030
THR 80.0032
PRO 90.0034
SER 100.0034
SER 110.0041
VAL 120.0040
SER 130.0046
ALA 140.0050
ALA 150.0058
VAL 160.0058
GLY 170.0055
GLY 180.0049
THR 190.0038
VAL 200.0032
THR 210.0022
ILE 220.0021
ASN 230.0022
CYS 240.0022
GLN 250.0026
ALA 260.0030
SER 270.0040
GLN 280.0035
SER 290.0026
ILE 300.0023
SER 310.0013
ALA 320.0017
TYR 330.0025
LEU 340.0020
ALA 350.0024
TRP 360.0017
TYR 370.0019
GLN 380.0014
GLN 390.0017
LYS 400.0013
PRO 410.0017
GLY 420.0024
GLN 430.0027
PRO 440.0034
PRO 450.0028
LYS 460.0030
LEU 470.0031
LEU 480.0026
ILE 490.0026
TYR 500.0030
ASP 510.0029
ALA 520.0019
SER 530.0026
ASP 540.0035
LEU 550.0036
ALA 560.0041
SER 570.0050
GLY 580.0048
VAL 590.0038
SER 600.0039
SER 610.0040
ARG 620.0036
PHE 630.0026
LYS 640.0025
GLY 650.0017
SER 660.0019
GLY 670.0015
SER 680.0012
GLY 690.0016
THR 700.0022
GLN 710.0020
PHE 720.0014
THR 730.0016
LEU 740.0015
THR 750.0022
ILE 760.0026
SER 770.0037
ALA 780.0046
LEU 790.0041
GLU 800.0044
CYS 810.0048
ALA 820.0037
ASP 830.0026
ALA 840.0028
ALA 850.0017
THR 860.0017
TYR 870.0014
TYR 880.0019
CYS 890.0020
GLN 900.0029
SER 910.0030
TYR 920.0038
TYR 930.0035
ALA 940.0047
ILE 950.0054
ILE 960.0066
THR 970.0062
TYR 980.0055
GLY 990.0057
ALA 1000.0048
ALA 1010.0047
PHE 1020.0037
GLY 1030.0033
GLY 1040.0038
GLY 1050.0028
THR 1060.0030
GLU 1070.0029
VAL 1080.0030
VAL 1090.0040
VAL 1100.0046
LYS 1110.0066
ARG 1120.0080
THR 1130.0103
VAL 1140.0118
ALA 1150.0125
ALA 1160.0148
PRO 1170.0141
SER 1180.0152
VAL 1190.0157
PHE 1200.0157
ILE 1210.0157
PHE 1220.0146
PRO 1230.0155
PRO 1240.0136
SER 1250.0132
ASP 1260.0138
GLU 1270.0111
GLN 1280.0107
LEU 1290.0129
LYS 1300.0115
SER 1310.0100
GLY 1320.0126
THR 1330.0126
ALA 1340.0136
SER 1350.0125
VAL 1360.0140
VAL 1370.0126
CYS 1380.0137
LEU 1390.0123
LEU 1400.0124
ASN 1410.0113
ASN 1420.0105
PHE 1430.0112
TYR 1440.0105
PRO 1450.0105
ARG 1460.0097
GLU 1470.0120
ALA 1480.0137
LYS 1490.0156
VAL 1500.0158
GLN 1510.0181
TRP 1520.0185
LYS 1530.0210
VAL 1540.0216
ASP 1550.0243
ASN 1560.0250
ALA 1570.0242
LEU 1580.0225
GLN 1590.0204
SER 1600.0193
GLY 1610.0177
ASN 1620.0164
SER 1630.0145
GLN 1640.0122
GLU 1650.0111
SER 1660.0085
VAL 1670.0076
THR 1680.0056
GLU 1690.0043
GLN 1700.0048
ASP 1710.0056
SER 1720.0051
LYS 1730.0072
ASP 1740.0081
CYS 1750.0068
THR 1760.0080
TYR 1770.0079
SER 1780.0085
LEU 1790.0095
SER 1800.0100
SER 1810.0120
THR 1820.0118
LEU 1830.0143
THR 1840.0138
LEU 1850.0156
SER 1860.0158
LYS 1870.0162
ALA 1880.0189
ASP 1890.0197
TYR 1900.0185
GLU 1910.0201
LYS 1920.0223
HIS 1930.0226
LYS 1940.0230
VAL 1950.0227
TYR 1960.0203
ALA 1970.0201
CYS 1980.0182
GLU 1990.0193
VAL 2000.0173
THR 2010.0175
HIS 2020.0156
GLN 2030.0154
GLY 2040.0154
LEU 2050.0178
SER 2060.0201
SER 2070.0215
PRO 2080.0209
VAL 2090.0202
THR 2100.0208
LYS 2110.0197
SER 2120.0206
PHE 2130.0208
ASN 2140.0222
ARG 2150.0209
GLY 2160.0212
GLU 2170.0228

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: december 26th, 2025.