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***  aspartate open to closed cut off 8  ***

Normal Mode Analysis for ID 2604241226251976617

Conformational change expected to be analysed

%Projmod-Wn> Eigenvector 4 Norm= 1.0001 %Projmod-Wn> Eigenvector 7 Norm= 0.9999

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 3 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity cumulative overlap amplitude (dq)
mode 7 1.00 0.0474 0.035 6.1726
mode 8 1.00 0.0237 0.035 0.4354
mode 9 1.00 0.0765 0.035 -0.6284
mode 10 1.00 0.4531 0.044 3.1242
mode 11 1.00 0.2032 0.059 4.0232
mode 12 1.00 0.1502 0.067 3.0523
mode 13 1.00 0.0949 0.069 -1.5653
mode 14 1.00 0.0480 0.076 2.7356
mode 15 7196.38 0.3983 0.499 21.5290
mode 16 9120.15 0.5350 0.633 12.1304
mode 17 11273.44 0.1477 0.640 2.6806
mode 18 13576.15 0.4194 0.652 3.6007
mode 19 14070.53 0.1865 0.665 3.8661
mode 20 15904.62 0.4674 0.691 -5.3138
mode 21 17124.44 0.0444 0.706 4.1294
mode 22 17810.59 0.4705 0.707 0.8998
mode 23 19154.38 0.4499 0.732 -5.2291
mode 24 20229.18 0.2002 0.732 -0.7531
mode 25 20859.71 0.6487 0.747 4.0218
mode 26 21189.59 0.4138 0.749 -1.5182
mode 27 22476.68 0.4325 0.751 1.4290
mode 28 23257.26 0.4949 0.751 -0.3910
mode 29 24008.24 0.3014 0.751 -0.3528
mode 30 24054.94 0.3713 0.760 3.0920
mode 31 24456.53 0.2524 0.764 2.0625
mode 32 25375.56 0.4974 0.764 0.7503
mode 33 26343.88 0.0981 0.804 -6.5219
mode 34 26617.38 0.5241 0.804 0.5637
mode 35 27150.44 0.3038 0.814 3.2287
mode 36 28075.74 0.4722 0.817 -2.0773
mode 37 28549.50 0.4925 0.818 -0.2899
mode 38 29185.50 0.4956 0.818 -0.0610
mode 39 29706.79 0.2863 0.818 -0.6468
mode 40 29874.59 0.2184 0.821 -1.7421
mode 41 30501.35 0.1449 0.821 -0.4733
mode 42 31394.50 0.5259 0.821 0.7539
mode 43 32302.44 0.5826 0.822 -0.7326
mode 44 32710.38 0.4298 0.822 0.1265
mode 45 34412.32 0.2868 0.824 -1.4884
mode 46 34795.50 0.5520 0.826 -1.6866
mode 47 35290.32 0.4794 0.832 2.4711
mode 48 35948.94 0.5428 0.835 1.6829
mode 49 36203.38 0.5607 0.835 -0.7083
mode 50 36859.53 0.4647 0.836 0.8121
mode 51 38030.82 0.6491 0.836 0.0461
mode 52 38918.94 0.6315 0.836 0.9519
mode 53 39128.03 0.6087 0.837 -0.6781
mode 54 39374.91 0.5402 0.839 1.6582
mode 55 40042.76 0.5544 0.843 1.8627
mode 56 40169.91 0.5266 0.846 -2.0177
mode 57 40749.74 0.2331 0.866 4.6650
mode 58 41321.44 0.3402 0.870 -2.0330
mode 59 42164.44 0.5857 0.870 -0.3889
mode 60 42955.32 0.5384 0.870 0.1773
mode 61 43180.32 0.5337 0.870 0.5660
mode 62 44380.15 0.5943 0.874 2.0808
mode 63 45233.82 0.5320 0.874 -0.3935
mode 64 45971.91 0.5575 0.876 -1.5205
mode 65 46215.32 0.4894 0.879 -1.7811
mode 66 46578.06 0.5297 0.881 1.2145
mode 67 47035.68 0.4152 0.881 -0.3300
mode 68 47295.21 0.4270 0.881 -0.7721
mode 69 47863.29 0.3812 0.883 -1.4387
mode 70 48086.53 0.5881 0.885 1.3842
mode 71 49384.15 0.3929 0.885 -0.2419
mode 72 50345.53 0.5871 0.885 -0.6222
mode 73 50527.53 0.4815 0.886 -0.9081
mode 74 50789.29 0.6124 0.886 0.0608
mode 75 51882.09 0.3442 0.886 -0.6757
mode 76 52156.59 0.5231 0.886 0.0211
mode 77 52923.44 0.5016 0.887 0.5448
mode 78 53154.21 0.3989 0.887 0.0127
mode 79 53774.24 0.4756 0.887 0.2466
mode 80 53963.59 0.4277 0.887 0.6944
mode 81 54387.21 0.5007 0.887 0.5000
mode 82 54714.41 0.4422 0.887 0.0945
mode 83 55464.29 0.4536 0.887 -0.0684
mode 84 56303.85 0.4629 0.887 -0.1550
mode 85 56997.06 0.5598 0.887 -0.0911
mode 86 57433.82 0.4936 0.888 -0.6475
mode 87 57893.74 0.4138 0.891 1.8805
mode 88 58611.62 0.5344 0.891 0.4182
mode 89 58689.88 0.4840 0.893 1.4599
mode 90 58854.76 0.5957 0.894 0.7159
mode 91 59200.35 0.4704 0.896 1.5483
mode 92 60115.06 0.2241 0.896 -0.8297
mode 93 60385.94 0.4306 0.897 0.9937
mode 94 61266.29 0.4362 0.897 -0.0567
mode 95 61498.94 0.4761 0.897 -0.4045
mode 96 61994.50 0.5102 0.897 -0.0726
mode 97 62273.56 0.3376 0.898 -0.5003
mode 98 62754.88 0.5643 0.899 -1.1305
mode 99 63192.21 0.5339 0.899 -0.6422
mode 100 63409.74 0.4934 0.900 1.0303
mode 101 64137.47 0.5467 0.900 0.5820
mode 102 64754.74 0.3791 0.901 0.3806
mode 103 65162.97 0.5085 0.901 0.4249
mode 104 65762.85 0.3714 0.901 -0.0150
mode 105 66203.41 0.4978 0.901 0.7548
mode 106 66357.29 0.3908 0.901 0.2569

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.