CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  CD4  ***

CA strain for 2604241430022074727

---  normal mode 11  ---

This graph displays the distance variation between successive pairs of CA atoms in the two extreme conformations that were computed for this mode (DQMIN/DQMAX). Large distance variations can be an indicator for residue pairs that support the important strain in that particular normal mode movement. Note that residue pairs between chain breaks or at flexible ends of the protein may also exhibit large CA-CA distance variations. If more than one residues ae grouped together into a rigid block (NRBL>1), CA-CA distance variations between CA atoms in the same block will be very low.

This feature is still experimental and will be further developped in the future.

CA iCA i+1vari
LYS 1LYS 2 0.1464
LYS 2VAL 3 -0.1408
VAL 3VAL 4 0.1031
VAL 4LEU 5 -0.1927
LEU 5GLY 6 0.1379
GLY 6LYS 7 -0.2087
LYS 7LYS 8 -0.0942
LYS 8GLY 9 0.1199
GLY 9ASP 10 -0.0150
ASP 10THR 11 0.0725
THR 11VAL 12 -0.0966
VAL 12GLU 13 0.0825
GLU 13LEU 14 0.0211
LEU 14THR 15 -0.0408
THR 15CYS 16 -0.1195
CYS 16THR 17 -0.0663
THR 17ALA 18 -0.0257
ALA 18SER 19 -0.0351
SER 19GLN 20 0.0162
GLN 20LYS 21 -0.0088
LYS 21LYS 22 -0.0060
LYS 22SER 23 -0.0089
SER 23ILE 24 -0.0325
ILE 24GLN 25 0.0059
GLN 25PHE 26 -0.0292
PHE 26HIS 27 0.0258
HIS 27TRP 28 -0.0416
TRP 28LYS 29 0.0105
LYS 29ASN 30 -0.0214
ASN 30SER 31 0.0541
SER 31ASN 32 -0.0355
ASN 32GLN 33 -0.0097
GLN 33ILE 34 0.1007
ILE 34LYS 35 -0.0728
LYS 35ILE 36 0.0684
ILE 36LEU 37 -0.0654
LEU 37GLY 38 0.0472
GLY 38ASN 39 0.0001
ASN 39GLN 40 0.0033
GLN 40GLY 41 0.0778
GLY 41SER 42 0.0145
SER 42PHE 43 0.0714
PHE 43LEU 44 0.0989
LEU 44THR 45 0.0231
THR 45LYS 46 -0.0260
LYS 46GLY 47 0.0368
GLY 47PRO 48 0.0605
PRO 48SER 49 0.2171
SER 49LYS 50 -0.1673
LYS 50LEU 51 -0.0184
LEU 51ASN 52 0.0032
ASN 52ASP 53 -0.0918
ASP 53ARG 54 -0.0246
ARG 54ALA 55 0.1440
ALA 55ASP 56 -0.2542
ASP 56SER 57 -0.0680
SER 57ARG 58 -0.0897
ARG 58ARG 59 0.1929
ARG 59SER 60 -0.0465
SER 60LEU 61 0.0336
LEU 61TRP 62 -0.0148
TRP 62ASP 63 -0.0297
ASP 63GLN 64 0.0074
GLN 64GLY 65 0.0136
GLY 65ASN 66 -0.0369
ASN 66PHE 67 0.0133
PHE 67PRO 68 -0.0199
PRO 68LEU 69 -0.0250
LEU 69ILE 70 -0.0070
ILE 70ILE 71 -0.0133
ILE 71LYS 72 -0.0354
LYS 72ASN 73 0.0339
ASN 73LEU 74 0.0193
LEU 74LYS 75 -0.0012
LYS 75ILE 76 0.0788
ILE 76GLU 77 -0.0827
GLU 77ASP 78 0.0145
ASP 78SER 79 -0.0137
SER 79ASP 80 -0.2417
ASP 80THR 81 0.0454
THR 81TYR 82 0.0341
TYR 82ILE 83 -0.0546
ILE 83CYS 84 0.0386
CYS 84GLU 85 -0.0280
GLU 85VAL 86 0.0378
VAL 86GLU 87 -0.0242
GLU 87ASP 88 0.0261
ASP 88GLN 89 -0.0513
GLN 89LYS 90 -0.0892
LYS 90GLU 91 -0.1730
GLU 91GLU 92 -0.0533
GLU 92VAL 93 -0.0765
VAL 93GLN 94 -0.0537
GLN 94LEU 95 -0.0140
LEU 95LEU 96 -0.0497
LEU 96VAL 97 -0.0618
VAL 97PHE 98 -0.0987
PHE 98GLY 99 -0.0402
GLY 99LEU 100 -0.2032
LEU 100THR 101 0.1520
THR 101ALA 102 -0.1734
ALA 102ASN 103 0.2678
ASN 103SER 104 -0.1875
SER 104ASP 105 -0.1426
ASP 105THR 106 0.0366
THR 106HIS 107 0.0149
HIS 107LEU 108 0.0056
LEU 108LEU 109 -0.0329
LEU 109GLN 110 -0.0323
GLN 110GLY 111 0.0686
GLY 111GLN 112 -0.0171
GLN 112SER 113 0.0509
SER 113LEU 114 0.0148
LEU 114THR 115 0.0863
THR 115LEU 116 0.0275
LEU 116THR 117 0.0603
THR 117LEU 118 -0.0520
LEU 118GLU 119 0.1468
GLU 119SER 120 -0.1268
SER 120PRO 121 -0.0207
PRO 121PRO 122 0.0016
PRO 122GLY 123 -0.0263
GLY 123SER 124 0.0287
SER 124SER 125 0.0214
SER 125PRO 126 0.0202
PRO 126SER 127 0.0870
SER 127VAL 128 0.0348
VAL 128GLN 129 0.0974
GLN 129CYS 130 0.0374
CYS 130ARG 131 0.0073
ARG 131SER 132 0.0098
SER 132PRO 133 0.0655
PRO 133ARG 134 -0.0994
ARG 134GLY 135 -0.0149
GLY 135LYS 136 0.0191
LYS 136ASN 137 0.1441
ASN 137ILE 138 -0.0535
ILE 138GLN 139 0.1578
GLN 139GLY 140 0.1363
GLY 140GLY 141 0.2159
GLY 141LYS 142 0.0957
LYS 142THR 143 0.1166
THR 143LEU 144 0.1090
LEU 144SER 145 0.0953
SER 145VAL 146 0.2079
VAL 146SER 147 -0.0966
SER 147GLN 148 0.0631
GLN 148LEU 149 -0.0196
LEU 149GLU 150 0.0881
GLU 150LEU 151 0.0031
LEU 151GLN 152 0.0650
GLN 152ASP 153 -0.0436
ASP 153SER 154 0.0452
SER 154GLY 155 -0.2121
GLY 155THR 156 -0.1698
THR 156TRP 157 0.0163
TRP 157THR 158 -0.0617
THR 158CYS 159 -0.0241
CYS 159THR 160 -0.0851
THR 160VAL 161 -0.0520
VAL 161LEU 162 0.0116
LEU 162GLN 163 -0.0534
GLN 163ASN 164 -0.0402
ASN 164GLN 165 -0.1011
GLN 165LYS 166 0.0928
LYS 166LYS 167 -0.2376
LYS 167VAL 168 0.0880
VAL 168GLU 169 -0.3318
GLU 169PHE 170 0.0107
PHE 170LYS 171 -0.3673
LYS 171ILE 172 0.1476
ILE 172ASP 173 -0.2439
ASP 173ILE 174 0.0239
ILE 174VAL 175 -0.1696
VAL 175VAL 176 -0.0177
VAL 176LEU 177 -0.0330
LEU 177ALA 178 -0.0555

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.