Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* test_cutoff10_hıv *

elNémo ID: 2604251125092265882

Job options:

ID        	=	 2604251125092265882
JOBID     	=	 test_cutoff10_hıv
USERID    	=	 unknown
PRIVAT    	=	 0

NMODES    	=	 10
DQMIN     	=	 -20
DQMAX     	=	 20
DQSTEP    	=	 20
DOGRAPHS  	=	 on

DOPROJMODS	=	 on
DORMSD    	=	 on

NRBL      	=	 -1
CUTOFF    	=	 10
CAONLY    	=	 0

Input data for this run:

HEADER test_cutoff10_hıv

CRYST1   50.200   50.200  106.800  90.00  90.00  90.00 P 1           1
ATOM      1  CA  PRO A   1      30.029  39.443   6.276  1.00 34.88           C
ATOM      2  CA  GLN A   2      30.291  37.574   2.939  1.00 35.15           C
ATOM      3  CA  ILE A   3      29.198  33.866   3.603  1.00 27.03           C
ATOM      4  CA  THR A   4      29.879  31.154   1.049  1.00 25.63           C
ATOM      5  CA  LEU A   5      27.765  28.000   0.939  1.00 22.06           C
ATOM      6  CA  TRP A   6      30.495  25.341   0.782  1.00 18.46           C
ATOM      7  CA  GLN A   7      29.232  24.468   4.325  1.00 27.79           C
ATOM      8  CA  ARG A   8      25.712  25.033   5.846  1.00 20.69           C
ATOM      9  CA  PRO A   9      25.637  28.755   6.521  1.00 18.91           C
ATOM     10  CA  LEU A  10      25.302  28.562  10.402  1.00 25.36           C
ATOM     11  CA  VAL A  11      25.658  31.782  12.386  1.00 28.60           C
ATOM     12  CA  THR A  12      25.408  32.825  16.088  1.00 36.63           C
ATOM     13  CA  ILE A  13      22.294  34.630  17.088  1.00 34.39           C
ATOM     14  CA  LYS A  14      21.630  36.315  20.385  1.00 42.45           C
ATOM     15  CA  ILE A  15      18.005  36.195  21.561  1.00 43.02           C
ATOM     16  CA  GLY A  16      16.839  36.347  25.163  1.00 45.75           C
ATOM     17  CA  GLY A  17      20.404  36.762  26.540  1.00 48.69           C
ATOM     18  CA  GLN A  18      20.511  33.193  25.326  1.00 47.74           C
ATOM     19  CA  LEU A  19      23.049  32.768  22.576  1.00 43.44           C
ATOM     20  CA  LYS A  20      22.189  30.076  19.912  1.00 40.02           C
ATOM     21  CA  GLU A  21      23.395  29.218  16.383  1.00 33.74           C
ATOM     22  CA  ALA A  22      20.968  29.146  13.435  1.00 26.75           C
ATOM     23  CA  LEU A  23      20.841  28.509   9.684  1.00 20.24           C
ATOM     24  CA  LEU A  24      20.405  31.509   7.274  1.00 20.88           C
ATOM     25  CA  ASP A  25      17.816  29.899   5.027  1.00 21.20           C
ATOM     26  CA  THR A  26      16.656  31.951   2.037  1.00 14.97           C
ATOM     27  CA  GLY A  27      14.130  29.242   1.414  1.00  8.76           C
ATOM     28  CA  ALA A  28      12.402  29.586   4.831  1.00 13.46           C
ATOM     29  CA  ASP A  29       9.725  32.319   4.926  1.00 22.54           C
ATOM     30  CA  ASP A  30       9.652  32.169   8.775  1.00 25.44           C
ATOM     31  CA  THR A  31      12.123  31.890  11.684  1.00 19.78           C
ATOM     32  CA  VAL A  32      11.639  28.792  13.849  1.00 15.10           C
ATOM     33  CA  LEU A  33      13.730  28.501  16.904  1.00 32.78           C
ATOM     34  CA  GLU A  34      14.210  25.866  19.471  1.00 36.50           C
ATOM     35  CA  GLU A  35      12.216  25.993  22.664  1.00 33.44           C
ATOM     36  CA  MET A  36      13.292  28.735  24.961  1.00 41.13           C
ATOM     37  CA  SER A  37      11.464  31.130  27.171  1.00 48.07           C
ATOM     38  CA  LEU A  38      10.752  34.330  25.702  1.00 43.41           C
ATOM     39  CA  PRO A  39       8.919  36.842  27.911  1.00 48.56           C
ATOM     40  CA  GLY A  40       5.869  37.631  25.830  1.00 48.64           C
ATOM     41  CA  ARG A  41       2.321  37.047  24.785  1.00 50.88           C
ATOM     42  CA  TRP A  42       2.139  34.383  22.203  1.00 37.65           C
ATOM     43  CA  LYS A  43      -0.474  33.077  19.792  1.00 40.69           C
ATOM     44  CA  PRO A  44      -0.586  29.339  18.647  1.00 45.30           C
ATOM     45  CA  LYS A  45       0.618  28.331  15.154  1.00 41.04           C
ATOM     46  CA  MET A  46       0.925  24.918  13.417  1.00 36.04           C
ATOM     47  CA  ILE A  47       3.926  24.428  11.080  1.00 30.22           C
ATOM     48  CA  GLY A  48       4.670  21.527   8.805  1.00 39.99           C
ATOM     49  CA  GLY A  49       7.460  19.008   9.167  1.00 47.57           C
ATOM     50  CA  ILE A  50       8.708  15.625   8.054  1.00 54.24           C
ATOM     51  CA  GLY A  51       6.175  13.203   9.523  1.00 52.49           C
ATOM     52  CA  GLY A  52       3.500  15.958  10.113  1.00 43.73           C
ATOM     53  CA  PHE A  53       2.471  19.313  11.532  1.00 40.92           C
ATOM     54  CA  ILE A  54       3.868  20.362  14.884  1.00 33.43           C
ATOM     55  CA  LYS A  55       2.320  23.188  17.028  1.00 30.62           C
ATOM     56  CA  VAL A  56       4.711  26.082  17.863  1.00 27.74           C
ATOM     57  CA  ARG A  57       4.220  29.401  19.681  1.00 26.88           C
ATOM     58  CA  GLN A  58       4.371  32.691  17.732  1.00 26.05           C
ATOM     59  CA  TYR A  59       6.149  35.657  19.397  1.00 29.17           C
ATOM     60  CA  ASP A  60       5.778  38.940  17.333  1.00 27.75           C
ATOM     61  CA  GLN A  61       8.129  41.871  17.731  1.00 26.68           C
ATOM     62  CA  ILE A  62      11.089  39.928  19.230  1.00 28.35           C
ATOM     63  CA  LEU A  63      14.520  41.608  18.985  1.00 31.02           C
ATOM     64  CA  ILE A  64      17.160  39.164  17.846  1.00 31.95           C
ATOM     65  CA  GLU A  65      20.769  39.936  16.904  1.00 35.74           C
ATOM     66  CA  ILE A  66      22.095  38.026  13.866  1.00 35.28           C
ATOM     67  CA  CYS A  67      25.808  38.305  13.212  1.00 44.44           C
ATOM     68  CA  GLY A  68      25.865  41.392  15.198  1.00 45.45           C
ATOM     69  CA  HIS A  69      22.813  43.074  13.538  1.00 40.20           C
ATOM     70  CA  LYS A  70      19.771  43.904  15.615  1.00 40.48           C
ATOM     71  CA  ALA A  71      16.608  42.863  13.921  1.00 37.00           C
ATOM     72  CA  ILE A  72      12.961  42.972  15.090  1.00 28.66           C
ATOM     73  CA  GLY A  73      10.703  40.306  13.807  1.00 22.09           C
ATOM     74  CA  THR A  74       8.448  37.465  14.676  1.00 23.11           C
ATOM     75  CA  VAL A  75      10.050  34.192  15.717  1.00 27.03           C
ATOM     76  CA  LEU A  76       8.140  30.913  16.005  1.00 24.93           C
ATOM     77  CA  VAL A  77       9.463  28.891  19.123  1.00 18.76           C
ATOM     78  CA  GLY A  78       8.901  25.130  19.006  1.00 22.24           C
ATOM     79  CA  PRO A  79      10.386  21.578  18.859  1.00 25.97           C
ATOM     80  CA  THR A  80      12.239  22.145  15.673  1.00 31.28           C
ATOM     81  CA  PRO A  81      15.315  19.938  14.919  1.00 28.82           C
ATOM     82  CA  VAL A  82      17.034  23.064  13.582  1.00 28.83           C
ATOM     83  CA  ASN A  83      17.078  26.802  14.302  1.00 28.94           C
ATOM     84  CA  ILE A  84      16.216  28.579  11.038  1.00 20.90           C
ATOM     85  CA  ILE A  85      16.592  32.364  10.277  1.00 17.90           C
ATOM     86  CA  GLY A  86      14.192  32.746   7.390  1.00 18.81           C
ATOM     87  CA  ARG A  87      13.368  35.606   5.035  1.00 22.16           C
ATOM     88  CA  ASN A  88      11.197  37.533   7.472  1.00 20.95           C
ATOM     89  CA  LEU A  89      14.447  38.439   9.379  1.00 16.67           C
ATOM     90  CA  LEU A  90      17.048  38.124   6.548  1.00 19.58           C
ATOM     91  CA  THR A  91      15.357  41.242   5.117  1.00 17.45           C
ATOM     92  CA  GLN A  92      15.962  43.389   8.212  1.00 20.97           C
ATOM     93  CA  ILE A  93      19.653  42.622   8.443  1.00 23.58           C
ATOM     94  CA  GLY A  94      19.936  43.479   4.700  1.00 27.50           C
ATOM     95  CA  CYS A  95      20.799  39.993   3.330  1.00 27.44           C
ATOM     96  CA  THR A  96      21.168  39.594  -0.354  1.00 24.82           C
ATOM     97  CA  LEU A  97      22.104  36.594  -2.544  1.00 24.24           C
ATOM     98  CA  ASN A  98      24.922  37.633  -4.795  1.00 28.65           C
ATOM     99  CA  PHE A  99      26.599  35.990  -7.792  1.00 33.20           C
END

A second structure was input as follows:


CRYST1   59.000   86.800   46.800  90.00  90.00  90.00 P 1           1
ATOM      1  CA  PRO A   1      29.924  39.009   5.093  1.00 31.10           C
ATOM      2  CA  GLN A   2      29.862  36.882   1.967  1.00 27.74           C
ATOM      3  CA  ILE A   3      28.873  33.386   2.940  1.00 22.14           C
ATOM      4  CA  THR A   4      29.764  30.315   0.815  1.00 20.83           C
ATOM      5  CA  LEU A   5      27.505  27.241   0.960  1.00 16.47           C
ATOM      6  CA  TRP A   6      30.150  24.548   0.987  1.00 17.03           C
ATOM      7  CA  GLN A   7      29.015  24.083   4.566  1.00 13.81           C
ATOM      8  CA  ARG A   8      25.739  24.885   6.377  1.00 14.40           C
ATOM      9  CA  PRO A   9      25.527  28.655   6.918  1.00 13.64           C
ATOM     10  CA  LEU A  10      25.483  28.664  10.729  1.00 18.78           C
ATOM     11  CA  VAL A  11      25.848  31.961  12.559  1.00 21.04           C
ATOM     12  CA  THR A  12      25.581  33.072  16.239  1.00 23.55           C
ATOM     13  CA  ILE A  13      22.524  34.883  17.304  1.00 19.80           C
ATOM     14  CA  LYS A  14      21.804  36.687  20.619  1.00 23.86           C
ATOM     15  CA  ILE A  15      18.231  36.419  21.764  1.00 26.62           C
ATOM     16  CA  GLY A  16      16.762  36.716  25.261  1.00 36.09           C
ATOM     17  CA  GLY A  17      20.223  37.616  26.334  1.00 38.57           C
ATOM     18  CA  GLN A  18      21.216  34.119  25.244  1.00 35.97           C
ATOM     19  CA  LEU A  19      23.768  33.175  22.575  1.00 32.56           C
ATOM     20  CA  LYS A  20      22.694  30.432  20.153  1.00 26.87           C
ATOM     21  CA  GLU A  21      23.737  28.864  16.844  1.00 23.95           C
ATOM     22  CA  ALA A  22      21.310  29.194  13.904  1.00 13.92           C
ATOM     23  CA  LEU A  23      21.053  28.407  10.284  1.00 13.69           C
ATOM     24  CA  LEU A  24      20.452  31.263   7.649  1.00 12.55           C
ATOM     25  CA  ASP A  25      17.571  29.703   5.727  1.00 12.57           C
ATOM     26  CA  THR A  26      16.267  31.322   2.551  1.00  8.74           C
ATOM     27  CA  GLY A  27      13.723  28.569   2.011  1.00  9.80           C
ATOM     28  CA  ALA A  28      12.025  29.300   5.374  1.00 12.30           C
ATOM     29  CA  ASP A  29       9.299  31.976   5.484  1.00 16.13           C
ATOM     30  CA  ASP A  30       9.570  32.242   9.360  1.00 15.40           C
ATOM     31  CA  THR A  31      12.156  32.046  12.048  1.00 10.39           C
ATOM     32  CA  VAL A  32      11.795  29.021  14.293  1.00 16.49           C
ATOM     33  CA  LEU A  33      13.866  28.307  17.370  1.00 14.42           C
ATOM     34  CA  GLU A  34      14.005  25.325  19.698  1.00 19.00           C
ATOM     35  CA  GLU A  35      12.073  25.411  22.988  1.00 18.91           C
ATOM     36  CA  MET A  36      12.887  28.486  25.149  1.00 20.96           C
ATOM     37  CA  SER A  37      10.924  30.993  27.051  1.00 28.77           C
ATOM     38  CA  LEU A  38      10.307  34.461  25.915  1.00 27.71           C
ATOM     39  CA  PRO A  39       8.258  37.000  27.707  1.00 34.84           C
ATOM     40  CA  GLY A  40       4.990  37.984  26.248  1.00 36.49           C
ATOM     41  CA  ARG A  41       1.695  36.819  25.062  1.00 38.25           C
ATOM     42  CA  TRP A  42       1.896  34.086  22.441  1.00 29.99           C
ATOM     43  CA  LYS A  43      -0.437  32.498  19.852  1.00 26.94           C
ATOM     44  CA  PRO A  44      -0.457  28.778  18.766  1.00 22.19           C
ATOM     45  CA  LYS A  45       0.531  28.095  15.153  1.00 18.93           C
ATOM     46  CA  MET A  46       1.193  24.987  13.057  1.00 15.66           C
ATOM     47  CA  ILE A  47       4.071  25.128  10.584  1.00 17.38           C
ATOM     48  CA  GLY A  48       4.782  22.349   8.100  1.00 23.77           C
ATOM     49  CA  GLY A  49       7.598  21.222   5.997  1.00 26.63           C
ATOM     50  CA  ILE A  50       9.360  18.128   4.863  1.00 28.61           C
ATOM     51  CA  GLY A  51       8.024  15.572   7.215  1.00 27.77           C
ATOM     52  CA  GLY A  52       4.763  17.298   8.083  1.00 24.16           C
ATOM     53  CA  PHE A  53       3.668  19.943  10.556  1.00 19.37           C
ATOM     54  CA  ILE A  54       4.761  20.971  14.053  1.00 18.48           C
ATOM     55  CA  LYS A  55       2.946  23.126  16.621  1.00 18.88           C
ATOM     56  CA  VAL A  56       4.837  26.235  17.730  1.00 15.63           C
ATOM     57  CA  ARG A  57       4.205  29.278  19.900  1.00 15.35           C
ATOM     58  CA  GLN A  58       4.325  32.577  17.944  1.00 12.99           C
ATOM     59  CA  TYR A  59       5.882  35.553  19.653  1.00 18.09           C
ATOM     60  CA  ASP A  60       5.806  38.964  17.941  1.00 23.37           C
ATOM     61  CA  GLN A  61       8.106  41.930  18.191  1.00 24.84           C
ATOM     62  CA  ILE A  62      11.102  40.015  19.392  1.00 21.42           C
ATOM     63  CA  LEU A  63      14.510  41.540  19.184  1.00 22.08           C
ATOM     64  CA  ILE A  64      17.352  39.472  17.803  1.00 25.19           C
ATOM     65  CA  GLU A  65      20.921  40.192  16.999  1.00 28.13           C
ATOM     66  CA  ILE A  66      22.263  38.351  13.956  1.00 28.61           C
ATOM     67  CA  CYS A  67      25.984  38.625  13.548  1.00 39.18           C
ATOM     68  CA  GLY A  68      25.792  42.011  15.143  1.00 42.45           C
ATOM     69  CA  HIS A  69      22.860  43.424  13.163  1.00 39.82           C
ATOM     70  CA  LYS A  70      19.844  43.982  15.327  1.00 33.47           C
ATOM     71  CA  ALA A  71      16.495  42.885  13.835  1.00 26.21           C
ATOM     72  CA  ILE A  72      12.913  42.831  15.105  1.00 23.15           C
ATOM     73  CA  GLY A  73      10.288  40.302  14.190  1.00 16.23           C
ATOM     74  CA  THR A  74       8.084  37.367  14.900  1.00 14.90           C
ATOM     75  CA  VAL A  75       9.778  34.308  16.282  1.00 14.31           C
ATOM     76  CA  LEU A  76       8.185  30.822  16.453  1.00 14.31           C
ATOM     77  CA  VAL A  77       9.303  28.539  19.331  1.00 13.61           C
ATOM     78  CA  GLY A  78       8.842  24.825  19.221  1.00 13.86           C
ATOM     79  CA  PRO A  79      10.291  21.401  18.747  1.00 17.06           C
ATOM     80  CA  THR A  80      12.442  22.293  15.723  1.00 19.48           C
ATOM     81  CA  PRO A  81      15.589  20.148  15.084  1.00 23.43           C
ATOM     82  CA  VAL A  82      17.836  23.237  14.425  1.00 18.64           C
ATOM     83  CA  ASN A  83      17.455  26.967  15.062  1.00 13.90           C
ATOM     84  CA  ILE A  84      16.362  28.532  11.745  1.00 10.35           C
ATOM     85  CA  ILE A  85      16.508  32.214  10.724  1.00  9.87           C
ATOM     86  CA  GLY A  86      13.937  32.679   7.955  1.00  9.13           C
ATOM     87  CA  ARG A  87      13.122  35.411   5.461  1.00  9.88           C
ATOM     88  CA  ASN A  88      11.144  37.561   7.898  1.00 12.64           C
ATOM     89  CA  LEU A  89      14.485  38.424   9.724  1.00 12.95           C
ATOM     90  CA  LEU A  90      17.075  37.974   6.892  1.00 12.11           C
ATOM     91  CA  THR A  91      15.410  40.784   4.956  1.00 12.71           C
ATOM     92  CA  GLN A  92      15.955  43.110   7.979  1.00 11.49           C
ATOM     93  CA  ILE A  93      19.717  42.536   8.020  1.00 13.77           C
ATOM     94  CA  GLY A  94      19.957  43.094   4.332  1.00 15.64           C
ATOM     95  CA  CYS A  95      20.851  39.521   3.349  1.00 16.34           C
ATOM     96  CA  THR A  96      20.594  38.675  -0.403  1.00 14.04           C
ATOM     97  CA  LEU A  97      21.345  35.553  -2.557  1.00 17.79           C
ATOM     98  CA  ASN A  98      23.881  36.230  -5.297  1.00 20.38           C
ATOM     99  CA  PHE A  99      25.114  34.224  -8.380  1.00 25.37           C
END

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.

Should you encounter any unexpected behaviour, please let us know. elNémo has been relocated. **Some cleaning from time to time** Sorry for the inconvenience.