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***  PERIPLASMIC BINDING PROTEIN 25-JUN-97 1ANF  ***

Normal Mode Analysis for ID 2604251423122313351

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6648
mode 8 1.04 0.6840
mode 9 1.37 0.5877
mode 10 1.55 0.2230
mode 11 1.77 0.2849
mode 12 1.89 0.7077
mode 13 1.91 0.6891
mode 14 2.03 0.3871
mode 15 2.11 0.3705
mode 16 2.27 0.5155
mode 17 2.32 0.3986
mode 18 2.40 0.0660
mode 19 2.49 0.2634
mode 20 2.55 0.3198
mode 21 2.68 0.3646
mode 22 2.73 0.4621
mode 23 2.75 0.3888
mode 24 2.80 0.4891
mode 25 2.88 0.2662
mode 26 2.96 0.1508
mode 27 2.97 0.3523
mode 28 3.03 0.4225
mode 29 3.07 0.4851
mode 30 3.11 0.3032
mode 31 3.13 0.4048
mode 32 3.19 0.2955
mode 33 3.22 0.4067
mode 34 3.24 0.3358
mode 35 3.29 0.4423
mode 36 3.33 0.5541
mode 37 3.37 0.2191
mode 38 3.39 0.2514
mode 39 3.41 0.2913
mode 40 3.45 0.3587
mode 41 3.52 0.3277
mode 42 3.55 0.2498
mode 43 3.60 0.5272
mode 44 3.62 0.3367
mode 45 3.67 0.3492
mode 46 3.70 0.3303
mode 47 3.73 0.4449
mode 48 3.74 0.5267
mode 49 3.78 0.3186
mode 50 3.80 0.4162
mode 51 3.85 0.3141
mode 52 3.85 0.0577
mode 53 3.87 0.4898
mode 54 3.91 0.3553
mode 55 3.94 0.3858
mode 56 3.98 0.4418
mode 57 4.02 0.4992
mode 58 4.04 0.4027
mode 59 4.07 0.3587
mode 60 4.11 0.3091
mode 61 4.14 0.2512
mode 62 4.15 0.1975
mode 63 4.19 0.3372
mode 64 4.20 0.5614
mode 65 4.25 0.4469
mode 66 4.27 0.5106
mode 67 4.30 0.3512
mode 68 4.31 0.2526
mode 69 4.36 0.3983
mode 70 4.38 0.3677
mode 71 4.38 0.5190
mode 72 4.42 0.2771
mode 73 4.45 0.4300
mode 74 4.46 0.3635
mode 75 4.48 0.3135
mode 76 4.51 0.4603
mode 77 4.52 0.3918
mode 78 4.56 0.3673
mode 79 4.58 0.4084
mode 80 4.60 0.4190
mode 81 4.64 0.5276
mode 82 4.65 0.4457
mode 83 4.67 0.2144
mode 84 4.70 0.4010
mode 85 4.72 0.4844
mode 86 4.75 0.3133
mode 87 4.77 0.2307
mode 88 4.78 0.4043
mode 89 4.81 0.3233
mode 90 4.83 0.4455
mode 91 4.84 0.3533
mode 92 4.85 0.4039
mode 93 4.87 0.3682
mode 94 4.91 0.3713
mode 95 4.93 0.3779
mode 96 4.94 0.3721
mode 97 4.96 0.1985
mode 98 5.00 0.3248
mode 99 5.00 0.2778
mode 100 5.02 0.3695
mode 101 5.02 0.3742
mode 102 5.05 0.4682
mode 103 5.06 0.4053
mode 104 5.07 0.3964
mode 105 5.13 0.3200
mode 106 5.14 0.2966

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.