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***  open_cutoff10  ***

Normal Mode Analysis for ID 2604261322202455018

Conformational change expected to be analysed

%Projmod-Wn> Eigenvector 11 Norm= 0.9998 %Projmod-Wn> Eigenvector 15 Norm= 0.9999 %Projmod-Wn> Eigenvector 20 Norm= 0.9999 %Projmod-Wn> Eigenvector 33 Norm= 0.9999 %Projmod-Wn> Eigenvector 36 Norm= 1.0001 %Projmod-Wn> Eigenvector 56 Norm= 0.9999 %Projmod-Wn> Eigenvector 57 Norm= 0.9999

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 4 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity cumulative overlap amplitude (dq)
mode 7 1.00 0.0142 0.047 9.7360
mode 8 1.69 0.0704 0.096 9.9052
mode 9 1.86 0.1104 0.149 -10.2826
mode 10 2.39 0.0802 0.162 5.1405
mode 11 3.14 0.0797 0.168 -3.5807
mode 12 3.58 0.0051 0.169 1.1642
mode 13 4.63 0.1705 0.345 18.8530
mode 14 4.85 0.1297 0.468 15.7134
mode 15 5.32 0.2071 0.549 12.8377
mode 16 5.47 0.2080 0.572 -6.6628
mode 17 5.86 0.2495 0.589 -5.9182
mode 18 6.47 0.2810 0.589 0.6926
mode 19 6.70 0.3004 0.589 0.5381
mode 20 6.93 0.2011 0.590 -1.0109
mode 21 7.36 0.0693 0.592 2.2037
mode 22 7.61 0.2304 0.593 -1.7674
mode 23 8.50 0.0477 0.596 -2.4676
mode 24 9.00 0.1389 0.599 -2.1323
mode 25 9.62 0.4070 0.636 -8.6984
mode 26 9.89 0.3434 0.671 8.4040
mode 27 10.12 0.0939 0.685 -5.3583
mode 28 10.48 0.4375 0.686 1.4041
mode 29 10.70 0.5159 0.708 6.4689
mode 30 11.20 0.2099 0.708 -0.7746
mode 31 11.33 0.3062 0.714 -3.5187
mode 32 11.63 0.0702 0.714 0.1827
mode 33 11.79 0.4012 0.716 2.3596
mode 34 12.30 0.6076 0.716 0.3658
mode 35 12.56 0.4353 0.717 -0.7296
mode 36 12.56 0.1724 0.718 1.9576
mode 37 12.99 0.3839 0.728 -4.2259
mode 38 13.61 0.1784 0.731 2.8742
mode 39 13.78 0.2743 0.737 3.2537
mode 40 14.05 0.4468 0.739 2.0504
mode 41 14.26 0.2131 0.739 -0.3338
mode 42 14.64 0.3256 0.741 1.6320
mode 43 14.65 0.4386 0.742 -1.7026
mode 44 14.96 0.5997 0.742 0.2949
mode 45 15.26 0.3316 0.742 -0.7667
mode 46 15.52 0.4721 0.754 -4.7910
mode 47 15.80 0.4807 0.754 0.4035
mode 48 15.89 0.4839 0.754 -0.4117
mode 49 16.07 0.3986 0.755 1.1174
mode 50 16.36 0.2820 0.756 -1.7739
mode 51 16.52 0.3012 0.758 2.2719
mode 52 16.82 0.3370 0.759 -1.1417
mode 53 17.06 0.4292 0.769 4.4839
mode 54 17.22 0.3304 0.774 3.0529
mode 55 17.39 0.3807 0.777 -2.6530
mode 56 17.64 0.3934 0.778 1.5613
mode 57 17.92 0.3533 0.784 -3.2883
mode 58 17.95 0.5619 0.788 -2.7229
mode 59 18.39 0.4048 0.789 -1.5809
mode 60 18.49 0.3190 0.792 -2.7378
mode 61 18.75 0.5715 0.794 2.0445
mode 62 19.19 0.3310 0.794 -0.1260
mode 63 19.41 0.5024 0.799 2.9974
mode 64 19.55 0.3390 0.799 -0.5763
mode 65 19.75 0.5010 0.801 1.8360
mode 66 19.98 0.3532 0.801 -0.7263
mode 67 20.08 0.3336 0.803 1.9108
mode 68 20.48 0.4967 0.803 0.0260
mode 69 20.67 0.4486 0.803 0.0251
mode 70 20.76 0.4036 0.805 2.3146
mode 71 21.12 0.2759 0.806 -0.7025
mode 72 21.30 0.4804 0.808 2.2300
mode 73 21.68 0.4664 0.809 -1.3249
mode 74 21.79 0.3135 0.811 1.5233
mode 75 22.06 0.4676 0.815 2.9073
mode 76 22.19 0.3309 0.816 1.5583
mode 77 22.39 0.4187 0.816 0.9049
mode 78 22.61 0.3985 0.820 2.7170
mode 79 22.71 0.4467 0.826 -3.2523
mode 80 22.77 0.5149 0.826 0.7710
mode 81 23.05 0.3809 0.827 1.7694
mode 82 23.21 0.4087 0.827 -0.6134
mode 83 23.41 0.5472 0.828 0.7244
mode 84 23.51 0.4822 0.830 -2.0536
mode 85 23.59 0.4076 0.831 -1.9907
mode 86 23.88 0.3595 0.833 1.7930
mode 87 24.06 0.2412 0.836 2.4368
mode 88 24.19 0.3040 0.836 0.4382
mode 89 24.34 0.3146 0.836 0.5969
mode 90 24.51 0.4749 0.836 -0.0918
mode 91 24.60 0.3614 0.836 0.4378
mode 92 24.67 0.4881 0.838 1.8731
mode 93 24.78 0.4210 0.838 0.2852
mode 94 24.98 0.1945 0.839 -1.6140
mode 95 25.18 0.3675 0.841 -1.5251
mode 96 25.45 0.4700 0.842 -1.2655
mode 97 25.51 0.3812 0.843 1.3374
mode 98 25.61 0.5034 0.843 -1.1740
mode 99 25.85 0.5154 0.844 1.6198
mode 100 26.00 0.5346 0.845 0.9934
mode 101 26.20 0.4754 0.845 0.5438
mode 102 26.25 0.4668 0.845 -0.4116
mode 103 26.43 0.4352 0.845 0.2538
mode 104 26.49 0.4546 0.845 -0.5927
mode 105 26.57 0.3582 0.845 -0.5547
mode 106 26.89 0.3984 0.848 -2.1662

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.