CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***    ***

Normal Mode Analysis for ID 2604262035212519982

Conformational change expected to be analysed

%Projmod-Wn> Eigenvector 19 Norm= 1.0001 %Projmod-Wn> Eigenvector 61 Norm= 0.9999 %Projmod-Wn> Eigenvector 93 Norm= 0.9999

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 2 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity cumulative overlap amplitude (dq)
mode 7 1.00 0.0115 0.002 -1.2334
mode 8 1.32 0.6222 0.284 14.0062
mode 9 1.46 0.6239 0.563 13.9132
mode 10 1.86 0.6277 0.607 -5.5396
mode 11 2.24 0.0156 0.635 4.3973
mode 12 2.53 0.4526 0.643 2.3222
mode 13 2.81 0.6110 0.643 -0.2802
mode 14 2.91 0.7358 0.656 2.9859
mode 15 2.96 0.4122 0.656 -0.6000
mode 16 3.07 0.3722 0.657 0.8094
mode 17 3.29 0.4427 0.660 1.5027
mode 18 3.32 0.2994 0.660 0.3964
mode 19 3.46 0.2796 0.668 2.2911
mode 20 3.52 0.2856 0.671 -1.4934
mode 21 3.64 0.2941 0.684 2.9511
mode 22 3.87 0.2846 0.684 -0.2815
mode 23 3.88 0.5040 0.684 -0.1234
mode 24 4.01 0.3385 0.691 2.1480
mode 25 4.12 0.3429 0.691 0.0958
mode 26 4.22 0.4899 0.692 -0.8728
mode 27 4.28 0.4296 0.693 0.9977
mode 28 4.32 0.3827 0.699 -2.0966
mode 29 4.43 0.3346 0.700 0.7596
mode 30 4.48 0.3804 0.701 0.6147
mode 31 4.54 0.5855 0.708 2.2211
mode 32 4.69 0.4027 0.711 -1.5446
mode 33 4.85 0.4142 0.712 0.8146
mode 34 4.98 0.4256 0.712 -0.0520
mode 35 5.04 0.2807 0.717 -1.8426
mode 36 5.19 0.3647 0.717 0.3195
mode 37 5.30 0.4563 0.721 1.5029
mode 38 5.37 0.4290 0.721 -0.1660
mode 39 5.51 0.4343 0.721 -0.1444
mode 40 5.55 0.4622 0.721 0.7004
mode 41 5.57 0.5287 0.724 1.3260
mode 42 5.64 0.5029 0.730 -2.1137
mode 43 5.86 0.5434 0.731 0.7365
mode 44 5.90 0.4234 0.731 0.0192
mode 45 5.99 0.5207 0.732 -0.9450
mode 46 6.12 0.4959 0.733 -0.8854
mode 47 6.19 0.3336 0.735 1.0334
mode 48 6.25 0.4263 0.738 -1.3848
mode 49 6.36 0.3014 0.738 0.6342
mode 50 6.40 0.3888 0.738 0.2390
mode 51 6.44 0.3856 0.741 -1.3002
mode 52 6.60 0.4006 0.745 1.7577
mode 53 6.64 0.5491 0.748 1.3156
mode 54 6.80 0.4463 0.748 0.4558
mode 55 6.82 0.4992 0.748 0.2977
mode 56 6.88 0.5500 0.750 -1.0371
mode 57 6.91 0.5140 0.750 0.4833
mode 58 7.04 0.3858 0.751 -0.8186
mode 59 7.16 0.5043 0.753 1.1907
mode 60 7.21 0.3641 0.754 -0.8915
mode 61 7.28 0.3751 0.755 0.4410
mode 62 7.32 0.4125 0.755 0.0363
mode 63 7.40 0.3944 0.755 0.3416
mode 64 7.53 0.4491 0.755 0.7471
mode 65 7.54 0.3231 0.755 0.0816
mode 66 7.58 0.5864 0.756 -0.8269
mode 67 7.71 0.5033 0.756 0.0091
mode 68 7.77 0.5479 0.756 0.1387
mode 69 7.85 0.5600 0.757 0.0961
mode 70 7.96 0.4919 0.757 -0.2428
mode 71 8.05 0.4871 0.757 0.4738
mode 72 8.09 0.5412 0.759 1.1309
mode 73 8.13 0.5160 0.759 -0.5138
mode 74 8.31 0.5385 0.760 -0.7398
mode 75 8.34 0.3403 0.760 0.4190
mode 76 8.44 0.5612 0.768 -2.2895
mode 77 8.49 0.5629 0.769 -0.7520
mode 78 8.52 0.5802 0.769 -0.5117
mode 79 8.67 0.4015 0.769 -0.3159
mode 80 8.70 0.5137 0.769 0.5404
mode 81 8.88 0.5206 0.775 -1.9239
mode 82 8.91 0.5366 0.778 1.4345
mode 83 8.93 0.5252 0.778 0.1428
mode 84 9.01 0.4927 0.778 -0.5160
mode 85 9.11 0.5419 0.779 -0.7023
mode 86 9.12 0.4488 0.779 -0.3782
mode 87 9.21 0.5341 0.781 -1.0646
mode 88 9.24 0.5471 0.781 0.6757
mode 89 9.37 0.4913 0.781 -0.2498
mode 90 9.42 0.5318 0.782 0.5533
mode 91 9.44 0.6154 0.783 -0.8675
mode 92 9.50 0.5793 0.783 0.0091
mode 93 9.67 0.5143 0.785 -1.3182
mode 94 9.72 0.5025 0.787 -1.0856
mode 95 9.84 0.5057 0.789 -1.0394
mode 96 9.91 0.4123 0.790 -0.9381
mode 97 9.95 0.5193 0.790 -0.4795
mode 98 10.02 0.4235 0.791 0.5922
mode 99 10.05 0.4937 0.792 -0.9873
mode 100 10.16 0.4588 0.794 0.9404
mode 101 10.20 0.4354 0.794 0.5955
mode 102 10.31 0.4962 0.795 -0.5969
mode 103 10.32 0.4291 0.796 -0.8686
mode 104 10.42 0.4446 0.797 1.0263
mode 105 10.44 0.5552 0.798 -0.5984
mode 106 10.51 0.6093 0.798 -0.5056

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.