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Normal Mode Analysis for ID 2604262204102534339

Conformational change expected to be analysed

%Projmod-Wn> Eigenvector 23 Norm= 1.0001 %Projmod-Wn> Eigenvector 35 Norm= 1.0001 %Projmod-Wn> Eigenvector 46 Norm= 0.9999 %Projmod-Wn> Eigenvector 99 Norm= 1.0001

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 1 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity cumulative overlap amplitude (dq)
mode 7 1.00 0.3896 0.051 5.9314
mode 8 1.13 0.0406 0.075 4.1233
mode 9 1.25 0.5571 0.566 -18.4703
mode 10 1.43 0.5582 0.598 -4.7100
mode 11 1.83 0.2546 0.603 -1.8927
mode 12 2.08 0.3134 0.609 2.0494
mode 13 2.18 0.5033 0.609 -0.0050
mode 14 2.28 0.7236 0.637 4.3822
mode 15 2.32 0.4366 0.645 -2.4706
mode 16 2.37 0.1954 0.646 -0.7603
mode 17 2.50 0.2410 0.663 -3.3821
mode 18 2.60 0.3619 0.665 1.4080
mode 19 2.69 0.2827 0.671 -1.8808
mode 20 2.74 0.3032 0.674 1.6143
mode 21 2.76 0.3082 0.674 -0.2932
mode 22 2.96 0.4298 0.678 -1.5805
mode 23 2.97 0.3710 0.678 0.4825
mode 24 3.05 0.3386 0.679 -0.3558
mode 25 3.13 0.5194 0.685 2.0945
mode 26 3.16 0.4745 0.688 1.4128
mode 27 3.29 0.5232 0.689 -1.0055
mode 28 3.35 0.5024 0.690 0.8771
mode 29 3.40 0.3917 0.701 2.6831
mode 30 3.47 0.4262 0.705 -1.8280
mode 31 3.56 0.3886 0.705 0.1472
mode 32 3.63 0.4814 0.712 2.2075
mode 33 3.67 0.4472 0.714 0.9070
mode 34 3.72 0.5160 0.715 0.8501
mode 35 3.78 0.2841 0.717 1.3082
mode 36 3.83 0.3235 0.723 2.0059
mode 37 3.93 0.5069 0.724 0.9023
mode 38 4.00 0.3969 0.725 0.5478
mode 39 4.09 0.3853 0.726 1.0995
mode 40 4.14 0.4674 0.728 1.1459
mode 41 4.18 0.4388 0.730 -1.1357
mode 42 4.27 0.2166 0.730 -0.5156
mode 43 4.33 0.3254 0.731 0.7290
mode 44 4.40 0.4894 0.732 0.7009
mode 45 4.45 0.5208 0.732 0.1675
mode 46 4.54 0.4984 0.737 -1.9590
mode 47 4.57 0.4346 0.738 0.5245
mode 48 4.62 0.4656 0.739 1.0063
mode 49 4.72 0.4389 0.740 0.5602
mode 50 4.76 0.5858 0.740 -0.5115
mode 51 4.80 0.4762 0.740 0.3820
mode 52 4.82 0.3249 0.741 -0.7872
mode 53 4.93 0.5318 0.742 0.7234
mode 54 4.98 0.5518 0.742 -0.0974
mode 55 5.04 0.5074 0.745 -1.3265
mode 56 5.06 0.4830 0.745 0.2822
mode 57 5.11 0.5044 0.748 -1.5465
mode 58 5.19 0.4421 0.749 0.6703
mode 59 5.23 0.5984 0.749 0.2055
mode 60 5.29 0.4183 0.749 0.4637
mode 61 5.34 0.4950 0.749 0.4357
mode 62 5.37 0.4318 0.751 1.0023
mode 63 5.40 0.5298 0.752 0.6788
mode 64 5.44 0.4440 0.752 -0.3074
mode 65 5.49 0.5702 0.752 0.0859
mode 66 5.50 0.5099 0.754 1.1555
mode 67 5.56 0.4805 0.754 0.4504
mode 68 5.60 0.4988 0.754 0.2007
mode 69 5.63 0.4173 0.755 0.8824
mode 70 5.70 0.4362 0.756 -0.8435
mode 71 5.72 0.5796 0.758 1.0118
mode 72 5.77 0.5566 0.760 1.2800
mode 73 5.87 0.3948 0.760 0.6116
mode 74 5.88 0.4800 0.761 0.5921
mode 75 5.96 0.4066 0.761 0.2252
mode 76 5.98 0.5235 0.761 0.0266
mode 77 6.02 0.4452 0.761 -0.1595
mode 78 6.05 0.5413 0.761 0.5438
mode 79 6.12 0.6176 0.761 0.0074
mode 80 6.21 0.4897 0.763 1.0454
mode 81 6.22 0.5495 0.765 -1.0387
mode 82 6.31 0.5197 0.765 0.2874
mode 83 6.39 0.5576 0.765 0.0372
mode 84 6.43 0.5743 0.765 -0.5105
mode 85 6.53 0.5413 0.766 0.9850
mode 86 6.54 0.5659 0.769 1.2879
mode 87 6.61 0.5627 0.769 0.4718
mode 88 6.63 0.4666 0.772 1.3686
mode 89 6.65 0.5047 0.773 0.9799
mode 90 6.69 0.5696 0.775 -1.0279
mode 91 6.71 0.5160 0.775 0.4721
mode 92 6.76 0.5049 0.779 -1.5989
mode 93 6.79 0.5245 0.780 -0.9736
mode 94 6.85 0.4989 0.780 0.3799
mode 95 6.88 0.5798 0.782 1.0724
mode 96 6.92 0.5253 0.787 1.8955
mode 97 7.01 0.4404 0.788 0.6099
mode 98 7.05 0.4318 0.789 0.8391
mode 99 7.06 0.4377 0.792 1.5325
mode 100 7.14 0.4732 0.792 0.0121
mode 101 7.17 0.5549 0.792 0.3263
mode 102 7.19 0.4942 0.792 0.0991
mode 103 7.22 0.5297 0.795 1.2815
mode 104 7.26 0.4670 0.795 -0.2724
mode 105 7.29 0.4194 0.795 0.1657
mode 106 7.31 0.5316 0.795 -0.5437

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.