CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  PmM60  ***

Normal Mode Analysis for ID 2604271734382715076

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.4474
mode 8 1.56 0.6293
mode 9 2.30 0.5812
mode 10 3.14 0.6152
mode 11 4.80 0.5399
mode 12 5.43 0.7264
mode 13 6.34 0.3666
mode 14 7.59 0.6905
mode 15 7.95 0.5823
mode 16 9.67 0.7166
mode 17 10.23 0.5555
mode 18 11.83 0.5033
mode 19 12.30 0.5428
mode 20 13.86 0.6758
mode 21 14.58 0.6629
mode 22 15.15 0.5981
mode 23 15.73 0.4331
mode 24 17.04 0.4565
mode 25 17.19 0.4930
mode 26 17.64 0.4401
mode 27 18.58 0.2872
mode 28 19.94 0.1555
mode 29 20.63 0.5002
mode 30 21.15 0.3809
mode 31 22.07 0.2998
mode 32 22.57 0.1583
mode 33 23.60 0.2183
mode 34 24.37 0.1493
mode 35 25.31 0.1277
mode 36 25.70 0.4397
mode 37 25.98 0.3456
mode 38 27.08 0.4024
mode 39 27.28 0.1603
mode 40 27.47 0.1879
mode 41 28.25 0.2800
mode 42 28.51 0.1453
mode 43 28.74 0.5086
mode 44 29.43 0.3036
mode 45 29.87 0.3202
mode 46 30.86 0.4150
mode 47 31.01 0.3220
mode 48 31.28 0.4005
mode 49 31.53 0.0628
mode 50 32.00 0.3240
mode 51 32.27 0.3024
mode 52 32.67 0.4799
mode 53 33.33 0.2238
mode 54 33.76 0.4107
mode 55 33.95 0.3608
mode 56 34.40 0.3942
mode 57 34.94 0.4963
mode 58 35.59 0.4016
mode 59 35.87 0.3429
mode 60 36.01 0.4512
mode 61 36.13 0.5084
mode 62 36.15 0.3915
mode 63 36.43 0.5291
mode 64 37.19 0.2214
mode 65 37.53 0.4094
mode 66 37.94 0.4571
mode 67 38.07 0.5463
mode 68 38.14 0.3238
mode 69 38.47 0.4434
mode 70 38.65 0.5096
mode 71 38.86 0.5066
mode 72 39.21 0.3662
mode 73 39.54 0.3950
mode 74 39.85 0.4688
mode 75 39.98 0.4411
mode 76 40.15 0.2330
mode 77 40.41 0.4537
mode 78 40.53 0.2367
mode 79 40.72 0.3646
mode 80 40.93 0.3648
mode 81 41.39 0.5284
mode 82 41.77 0.2698
mode 83 41.82 0.4456
mode 84 42.03 0.4924
mode 85 42.30 0.2471
mode 86 42.72 0.4274
mode 87 42.87 0.5114
mode 88 43.12 0.1599
mode 89 43.20 0.3169
mode 90 43.46 0.4002
mode 91 43.60 0.4687
mode 92 43.78 0.4362
mode 93 43.81 0.2120
mode 94 43.95 0.2325
mode 95 44.15 0.4070
mode 96 44.45 0.3925
mode 97 44.55 0.3078
mode 98 44.73 0.4205
mode 99 45.00 0.4544
mode 100 45.34 0.4367
mode 101 45.36 0.3333
mode 102 45.53 0.4690
mode 103 45.81 0.4614
mode 104 46.12 0.1307
mode 105 46.23 0.4922
mode 106 46.51 0.4398

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.