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***  OXIDOREDUCTASE 21-OCT-88 5DFR  ***

Normal Mode Analysis for ID 2604281704282925999

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 1 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5478
mode 8 1.17 0.4836
mode 9 1.49 0.0834
mode 10 1.55 0.1483
mode 11 1.77 0.2607
mode 12 1.90 0.4041
mode 13 2.23 0.3369
mode 14 2.36 0.2535
mode 15 2.36 0.3731
mode 16 2.42 0.1839
mode 17 2.55 0.3913
mode 18 2.64 0.3742
mode 19 2.68 0.4016
mode 20 2.80 0.1192
mode 21 2.88 0.3017
mode 22 2.97 0.3581
mode 23 3.04 0.3110
mode 24 3.12 0.3762
mode 25 3.19 0.4332
mode 26 3.28 0.3772
mode 27 3.33 0.5164
mode 28 3.40 0.1462
mode 29 3.42 0.3548
mode 30 3.45 0.3191
mode 31 3.53 0.2794
mode 32 3.57 0.4099
mode 33 3.65 0.4192
mode 34 3.65 0.2307
mode 35 3.73 0.4123
mode 36 3.74 0.2824
mode 37 3.87 0.1802
mode 38 3.90 0.2209
mode 39 3.92 0.3334
mode 40 4.03 0.3058
mode 41 4.04 0.3585
mode 42 4.07 0.3448
mode 43 4.13 0.1909
mode 44 4.21 0.1417
mode 45 4.23 0.3052
mode 46 4.28 0.3927
mode 47 4.30 0.3334
mode 48 4.40 0.3272
mode 49 4.42 0.3283
mode 50 4.44 0.4583
mode 51 4.48 0.3931
mode 52 4.54 0.4537
mode 53 4.58 0.3865
mode 54 4.66 0.4766
mode 55 4.71 0.3540
mode 56 4.73 0.3542
mode 57 4.76 0.4817
mode 58 4.79 0.3961
mode 59 4.82 0.4604
mode 60 4.84 0.3306
mode 61 4.91 0.4272
mode 62 4.95 0.2102
mode 63 5.00 0.3512
mode 64 5.04 0.3059
mode 65 5.08 0.3096
mode 66 5.11 0.3464
mode 67 5.15 0.1634
mode 68 5.17 0.2020
mode 69 5.20 0.4877
mode 70 5.26 0.2710
mode 71 5.30 0.3971
mode 72 5.31 0.3202
mode 73 5.36 0.4117
mode 74 5.37 0.2118
mode 75 5.40 0.4205
mode 76 5.42 0.3530
mode 77 5.45 0.2656
mode 78 5.49 0.4256
mode 79 5.50 0.3553
mode 80 5.53 0.3149
mode 81 5.57 0.2863
mode 82 5.59 0.3231
mode 83 5.61 0.2696
mode 84 5.62 0.3567
mode 85 5.65 0.5085
mode 86 5.69 0.3359
mode 87 5.70 0.2092
mode 88 5.74 0.2142
mode 89 5.77 0.2608
mode 90 5.79 0.1228
mode 91 5.83 0.0856
mode 92 5.85 0.2425
mode 93 5.87 0.2979
mode 94 5.89 0.2518
mode 95 5.90 0.3843
mode 96 5.93 0.4322
mode 97 5.97 0.1887
mode 98 6.03 0.2611
mode 99 6.05 0.2935
mode 100 6.06 0.3276
mode 101 6.08 0.3835
mode 102 6.09 0.2023
mode 103 6.10 0.2548
mode 104 6.13 0.2507
mode 105 6.17 0.2552
mode 106 6.19 0.3114

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.