*** ***
Output from eigenvector calculation:
STDOUT:
CUTOFF set to default value (CUTOFF=8)
Build Tirion matrix:
Pdbmat> Computes the Hessian matrix, using an Elastic Network Model.
Pdbmat> Version 3.50, Fevrier 2004.
Pdbmat> Options to be read in pdbmat.dat file.
Pdbmat> Coordinate filename = 2604291037543353441.atom
Pdbmat> Distance cutoff = 8.00
Force constant = 10.00
Origin of mass values = CONS
Pdbmat> Levelshift = 1.0E-09
PRINTing level = 2
Pdbmat> Coordinate file 2604291037543353441.atom to be opened.
Openam> File opened: 2604291037543353441.atom
Pdbmat> Coordinate file in PDB format.
Rdatompdb> Reading pdb file.
Rdatompdb> End of file reached.
Rdatompdb> Number of I/O errors: 0
Rdatompdb> Number of residues found = 99
First residue number = 1
Last residue number = 99
Number of atoms found = 99
Mean number per residue = 1.0
Pdbmat> Coordinate statistics:
= 15.029354 +/- 8.158668 From: -0.586000 To: 30.495000
= 32.184030 +/- 6.974105 From: 13.203000 To: 43.904000
= 12.970616 +/- 7.571457 From: -7.792000 To: 27.911000
Pdbmat> Masses are all set to one.
Openam> File opened: pdbmat.xyzm
Pdbmat> Coordinates and masses considered are saved.
Openam> File opened: pdbmat.sdijf
Pdbmat> Matrix statistics:
Pdbmat> The matrix is 10.1078 % Filled.
Pdbmat> 4473 non-zero elements.
Pdbmat> 431 atom-atom interactions.
Pdbmat> Number per atom= 8.71 +/- 3.13
Maximum number = 15
Minimum number = 2
Pdbmat> Matrix trace = 8620.00
Pdbmat> Larger element = 68.6742
Pdbmat> 0 elements larger than +/- 1.0E+10
Pdbmat> Normal end.
using diagstd (there are 99 atoms in your structure)
Diagstd> Version 1.05, August 2004.
Diagstd> Matrix to be read from file: pdbmat.sdijf
Diagstd> Lecture de la matrice -Format CERFACS-
Diagstd> Matrix dimension (Nord) = 297
Diagstd> Number of non-zero elements 4473
Diagstd> Nb of elements found twice: 0
Diagstd> Nb of elements > 1E+10 : 0
Diagstd> Matrix trace: 8620.0000003
%Diagstd-Wn: Nb on non-zero elements there: 297
Openam> file on opening on unit 11:
pdbmat.eigenfacs
Diagstd> Diagonalization.
Diagstd> 297 eigenvectors are about to be computed.
Diagstd> Sum of eigenvalues = 8620.0000003
Diagstd> Eigenvalues:
0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
0.0000000 0.0000000 0.0000000 0.0000000 0.0000000
0.0000000 0.0000000 0.0000000 0.0198037 0.0339159
0.0510386 0.0564111 0.1140520 0.1488155 0.1534956
0.2013913 0.2253685 0.2375431 0.3189647 0.3481187
0.4579260 0.5296244 0.5943852 0.7277903 0.8827326
0.9587979 1.0813329 1.1278618 1.1642803 1.2877708
1.4192605 1.4402922 1.5843671 1.6002867 1.6217880
1.8146435 1.9202575 2.0190624 2.1166357 2.5048267
2.5565876 2.6459745 2.7215651 3.1387714 3.1836999
3.5258743 3.6021338 3.8605341 4.1987516 4.2807577
4.3888225 4.6120560 4.8196161 5.1171525 5.2326142
5.3216421 5.3956917 5.4502774 5.7022655 5.8599325
6.0300489 6.3166634 6.7743868 6.8943076 6.9592925
7.1985259 7.2932281 7.7022485 7.9326260 8.0662815
8.1307077 8.2673373 8.3646734 8.4497372 8.6731453
8.7909198 9.0848681 9.3010616 9.3539051 9.7506608
9.7817383 9.9059586 10.4255268 10.6542092 10.8537563
11.0820332 11.3114751 11.4391825 11.4783609 11.9131707
12.1307001 12.2796304 12.4472031 12.7297520 12.9965373
13.1636834 13.3110167 13.4743079 13.5936179 13.9179035
14.2518918 14.3616622 14.6005477 14.9109592 15.0556043
15.3363197 15.5051964 15.5608154 15.7634397 16.2034782
16.5148694 16.9164303 17.1150108 17.1725959 17.4688046
17.5829703 17.7403849 17.8486340 18.3173330 18.5195842
18.8564030 19.1118739 19.4343398 19.5966634 19.8683766
20.0240234 20.3119338 20.4555035 20.5344437 20.9078523
20.9837720 21.2394597 21.4540081 21.7579737 21.9283020
22.0962146 22.1942082 22.4747879 22.5050769 22.9341742
23.3036698 23.4312087 23.7171133 24.2927151 24.5096894
24.6599784 24.9039814 24.9517657 25.1374639 25.2534101
25.4657492 25.7693183 26.0368085 26.3745232 26.4987472
26.7184681 26.7485967 27.0499225 27.3057877 27.7302900
28.2743325 28.4816539 28.5682644 28.8383598 29.4092749
29.5844460 29.7969365 30.0139456 30.2645179 30.5329777
30.5580821 30.8625804 31.1758912 31.2697460 31.4034132
31.7465097 31.9425974 32.1286400 32.3897353 33.0090829
33.2555747 33.5796801 33.6000327 34.6130428 34.6640545
35.2029049 35.4257029 35.4869294 35.7128517 36.1660893
36.4409934 36.7016518 37.4614054 37.8230795 38.0275417
38.4500825 38.9553273 39.0795421 39.6099666 40.0401213
40.2429480 40.3523938 40.7420238 41.0776606 41.3678616
41.6887267 42.0167387 42.3496025 42.4301858 42.9004626
43.1243371 43.6881719 43.9255150 44.2969799 44.9751610
45.1687832 45.5603982 45.9848208 46.2018559 46.3884392
47.0382661 47.4147296 47.5963937 47.7909241 48.1718024
48.5451780 48.6452081 49.0653436 49.1977061 49.8361871
50.0173071 50.0985259 50.6496600 51.2663562 51.4485409
52.1115121 52.4254538 52.7711270 52.9312457 53.5528916
53.8710290 54.3940995 54.5319235 54.9697267 55.5999345
55.9579214 55.9942410 56.7268073 56.8536648 57.3417270
58.0407800 58.6674458 59.1529000 60.6479897 60.9022762
61.1347486 61.3368648 61.8882954 62.4105985 63.2521435
63.9760910 64.2464495 64.8575129 66.1912171 67.4072475
67.5216345 68.4492262 68.6953870 69.8493919 70.8572378
72.2005095 72.8531190 73.1097890 73.7203226 74.6683583
75.0347987 75.6017246 76.3699303 77.6943556 79.3016108
80.3752005 81.9406297 83.0189322 84.6585432 84.9236169
86.6462401 87.5482193 89.3875209 90.1197175 93.1486402
94.5786181 103.8910226
Diagstd> Frequencies (cm-1, if the matrix is a hessien in CHARMM units):
0.0033778 0.0034152 0.0034196 0.0034234 0.0034250
0.0034298 0.0034329 0.0034341 0.0034359 0.0034377
0.0034421 0.0034474 0.0034492 15.2816010 19.9984698
24.5326511 25.7915646 36.6730322 41.8908711 42.5444834
48.7321614 51.5515655 52.9256900 61.3291029 64.0706280
73.4840230 79.0276888 83.7200100 92.6399707 102.0257676
106.3307352 112.9210706 115.3249358 117.1720586 123.2294653
129.3678419 130.3228563 136.6857350 137.3707229 138.2904907
146.2820187 150.4786948 154.3014997 157.9859053 171.8636856
173.6303404 176.6396147 179.1449807 192.3867359 193.7587587
203.9053838 206.0986762 213.3629352 222.5129899 224.6754405
227.4936555 233.2075288 238.3973950 245.6458662 248.4017421
250.5059872 252.2428368 253.5155378 259.3098399 262.8703410
266.6586621 272.9223788 282.6378204 285.1284871 286.4691286
291.3513716 293.2615857 301.3727934 305.8466785 308.4124970
309.6417080 312.2325025 314.0651691 315.6580591 319.8037781
321.9678001 327.3064719 331.1780472 332.1174995 339.0879094
339.6278530 341.7775513 350.6261356 354.4507424 357.7546720
361.4972556 365.2202945 367.2761898 367.9045995 374.8080947
378.2145328 380.5291467 383.1167751 387.4407104 391.4795752
393.9889078 396.1876150 398.6102981 400.3711813 405.1186065
409.9506114 411.5263360 414.9347945 419.3224079 421.3513375
425.2612952 427.5962777 428.3625104 431.1424393 437.1187192
441.2989072 446.6318001 449.2456377 450.0007682 453.8651893
455.3458692 457.3796096 458.7729167 464.7574936 467.3162637
471.5466955 474.7302613 478.7184613 480.7135308 484.0346719
485.9269124 489.4078331 491.1344154 492.0811758 496.5351430
497.4358248 500.4572819 502.9785910 506.5292206 508.5079914
510.4511895 511.5818271 514.8053847 515.1521663 520.0401012
524.2125808 525.6451072 528.8423113 535.2212015 537.6060953
539.2518284 541.9131283 542.4327745 544.4475024 545.7016864
547.9911046 551.2476427 554.1012816 557.6832349 558.9950360
561.3077739 561.6241596 564.7786782 567.4435125 571.8373074
577.4195192 579.5326160 580.4131038 583.1503734 588.8944191
590.6456380 592.7630007 594.9176118 597.3957939 600.0395275
600.2861554 603.2695392 606.3239437 607.2359244 608.5324013
611.8476164 613.7342984 615.5189830 618.0149481 623.8957243
626.2208289 629.2649719 629.4556414 638.8739345 639.3445381
644.2946594 646.3303029 646.8885906 648.9444840 653.0494314
655.5266977 657.8669756 664.6412833 667.8419925 669.6446536
673.3547351 677.7643306 678.8440461 683.4354756 687.1364272
688.8746035 689.8107082 693.1330048 695.9821986 698.4363212
701.1397595 703.8926821 706.6753607 707.3473764 711.2565322
713.1099507 717.7566364 719.7036603 722.7404124 728.2519293
729.8178414 732.9747867 736.3809238 738.1166312 739.6055485
744.7678704 747.7422478 749.1733227 750.7027283 753.6882216
756.6034706 757.3825816 760.6462046 761.6715024 766.5980037
767.9897670 768.6130498 772.8292438 777.5198866 778.9001932
783.9026232 786.2603577 788.8482470 790.0441066 794.6698626
797.0267834 800.8868744 801.9008776 805.1134262 809.7154389
812.3179820 812.5815578 817.8797410 818.7937378 822.3007086
827.2978587 831.7520323 835.1861830 845.6749865 847.4460162
849.0618848 850.4642588 854.2786265 857.8758732 863.6403088
868.5686112 870.4019321 874.5314369 883.4774390 891.5558971
892.3120414 898.4202903 900.0343143 907.5626092 914.0866991
922.7103911 926.8711303 928.5024316 932.3712937 938.3472416
940.6469270 944.1937725 948.9787276 957.1720639 967.0218449
973.5456374 982.9805592 989.4272151 999.1499607 1000.7129540
1010.8114233 1016.0590278 1026.6767488 1030.8730618 1048.0537105
1056.0677063 1106.8385856
Diagstd> Normal end.
B-factor analysis
Bfactors> Version 1.22, Bordeaux.
Getnam> Eigenvector filename ?
Getnam> 2604291037543353441.eigenfacs
Openam> file on opening on unit 10:
2604291037543353441.eigenfacs
Getnam> Corresponding pdb filename ?
Getnam> 2604291037543353441.atom
Openam> file on opening on unit 11:
2604291037543353441.atom
Getnum> Number of skipped eigenvectors ?
Getnum> 0
Getnum> Number of usefull eigenvectors ?
Getnum> 10000
%Getnum-Err: number larger than 106 This is not allowed. Sorry.
Rdatompdb> Reading pdb file.
Rdatompdb> End of file reached.
Rdatompdb> Number of I/O errors: 0
Rdatompdb> Number of residues found = 99
First residue number = 1
Last residue number = 99
Number of atoms found = 99
Mean number per residue = 1.0
Rdmodfacs> Old Blzpack file format detected.
Rdmodfacs> Numero du vecteur CERFACS en lecture: 1
Rdmodfacs> Valeur propre du vecteur en lecture: 9.6757E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 2
Rdmodfacs> Valeur propre du vecteur en lecture: 9.8909E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 3
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9163E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 4
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9384E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 5
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9481E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 6
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9757E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 7
Rdmodfacs> Valeur propre du vecteur en lecture: 9.9936E-10
Rdmodfacs> Numero du vecteur CERFACS en lecture: 8
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0001E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 9
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0011E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 10
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0022E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 11
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0048E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 12
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0078E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 13
Rdmodfacs> Valeur propre du vecteur en lecture: 1.0089E-09
Rdmodfacs> Numero du vecteur CERFACS en lecture: 14
Rdmodfacs> Valeur propre du vecteur en lecture: 1.9804E-02
Rdmodfacs> Numero du vecteur CERFACS en lecture: 15
Rdmodfacs> Valeur propre du vecteur en lecture: 3.3916E-02
Rdmodfacs> Numero du vecteur CERFACS en lecture: 16
Rdmodfacs> Valeur propre du vecteur en lecture: 5.1039E-02
Rdmodfacs> Numero du vecteur CERFACS en lecture: 17
Rdmodfacs> Valeur propre du vecteur en lecture: 5.6411E-02
Rdmodfacs> Numero du vecteur CERFACS en lecture: 18
Rdmodfacs> Valeur propre du vecteur en lecture: 0.1141
Rdmodfacs> Numero du vecteur CERFACS en lecture: 19
Rdmodfacs> Valeur propre du vecteur en lecture: 0.1488
Rdmodfacs> Numero du vecteur CERFACS en lecture: 20
Rdmodfacs> Valeur propre du vecteur en lecture: 0.1535
Rdmodfacs> Numero du vecteur CERFACS en lecture: 21
Rdmodfacs> Valeur propre du vecteur en lecture: 0.2014
Rdmodfacs> Numero du vecteur CERFACS en lecture: 22
Rdmodfacs> Valeur propre du vecteur en lecture: 0.2254
Rdmodfacs> Numero du vecteur CERFACS en lecture: 23
Rdmodfacs> Valeur propre du vecteur en lecture: 0.2375
Rdmodfacs> Numero du vecteur CERFACS en lecture: 24
Rdmodfacs> Valeur propre du vecteur en lecture: 0.3190
Rdmodfacs> Numero du vecteur CERFACS en lecture: 25
Rdmodfacs> Valeur propre du vecteur en lecture: 0.3481
Rdmodfacs> Numero du vecteur CERFACS en lecture: 26
Rdmodfacs> Valeur propre du vecteur en lecture: 0.4579
Rdmodfacs> Numero du vecteur CERFACS en lecture: 27
Rdmodfacs> Valeur propre du vecteur en lecture: 0.5296
Rdmodfacs> Numero du vecteur CERFACS en lecture: 28
Rdmodfacs> Valeur propre du vecteur en lecture: 0.5944
Rdmodfacs> Numero du vecteur CERFACS en lecture: 29
Rdmodfacs> Valeur propre du vecteur en lecture: 0.7278
Rdmodfacs> Numero du vecteur CERFACS en lecture: 30
Rdmodfacs> Valeur propre du vecteur en lecture: 0.8827
Rdmodfacs> Numero du vecteur CERFACS en lecture: 31
Rdmodfacs> Valeur propre du vecteur en lecture: 0.9588
Rdmodfacs> Numero du vecteur CERFACS en lecture: 32
Rdmodfacs> Valeur propre du vecteur en lecture: 1.081
Rdmodfacs> Numero du vecteur CERFACS en lecture: 33
Rdmodfacs> Valeur propre du vecteur en lecture: 1.128
Rdmodfacs> Numero du vecteur CERFACS en lecture: 34
Rdmodfacs> Valeur propre du vecteur en lecture: 1.164
Rdmodfacs> Numero du vecteur CERFACS en lecture: 35
Rdmodfacs> Valeur propre du vecteur en lecture: 1.288
Rdmodfacs> Numero du vecteur CERFACS en lecture: 36
Rdmodfacs> Valeur propre du vecteur en lecture: 1.419
Rdmodfacs> Numero du vecteur CERFACS en lecture: 37
Rdmodfacs> Valeur propre du vecteur en lecture: 1.440
Rdmodfacs> Numero du vecteur CERFACS en lecture: 38
Rdmodfacs> Valeur propre du vecteur en lecture: 1.584
Rdmodfacs> Numero du vecteur CERFACS en lecture: 39
Rdmodfacs> Valeur propre du vecteur en lecture: 1.600
Rdmodfacs> Numero du vecteur CERFACS en lecture: 40
Rdmodfacs> Valeur propre du vecteur en lecture: 1.622
Rdmodfacs> Numero du vecteur CERFACS en lecture: 41
Rdmodfacs> Valeur propre du vecteur en lecture: 1.815
Rdmodfacs> Numero du vecteur CERFACS en lecture: 42
Rdmodfacs> Valeur propre du vecteur en lecture: 1.920
Rdmodfacs> Numero du vecteur CERFACS en lecture: 43
Rdmodfacs> Valeur propre du vecteur en lecture: 2.019
Rdmodfacs> Numero du vecteur CERFACS en lecture: 44
Rdmodfacs> Valeur propre du vecteur en lecture: 2.117
Rdmodfacs> Numero du vecteur CERFACS en lecture: 45
Rdmodfacs> Valeur propre du vecteur en lecture: 2.505
Rdmodfacs> Numero du vecteur CERFACS en lecture: 46
Rdmodfacs> Valeur propre du vecteur en lecture: 2.557
Rdmodfacs> Numero du vecteur CERFACS en lecture: 47
Rdmodfacs> Valeur propre du vecteur en lecture: 2.646
Rdmodfacs> Numero du vecteur CERFACS en lecture: 48
Rdmodfacs> Valeur propre du vecteur en lecture: 2.722
Rdmodfacs> Numero du vecteur CERFACS en lecture: 49
Rdmodfacs> Valeur propre du vecteur en lecture: 3.139
Rdmodfacs> Numero du vecteur CERFACS en lecture: 50
Rdmodfacs> Valeur propre du vecteur en lecture: 3.184
Rdmodfacs> Numero du vecteur CERFACS en lecture: 51
Rdmodfacs> Valeur propre du vecteur en lecture: 3.526
Rdmodfacs> Numero du vecteur CERFACS en lecture: 52
Rdmodfacs> Valeur propre du vecteur en lecture: 3.602
Rdmodfacs> Numero du vecteur CERFACS en lecture: 53
Rdmodfacs> Valeur propre du vecteur en lecture: 3.861
Rdmodfacs> Numero du vecteur CERFACS en lecture: 54
Rdmodfacs> Valeur propre du vecteur en lecture: 4.199
Rdmodfacs> Numero du vecteur CERFACS en lecture: 55
Rdmodfacs> Valeur propre du vecteur en lecture: 4.281
Rdmodfacs> Numero du vecteur CERFACS en lecture: 56
Rdmodfacs> Valeur propre du vecteur en lecture: 4.389
Rdmodfacs> Numero du vecteur CERFACS en lecture: 57
Rdmodfacs> Valeur propre du vecteur en lecture: 4.612
Rdmodfacs> Numero du vecteur CERFACS en lecture: 58
Rdmodfacs> Valeur propre du vecteur en lecture: 4.820
Rdmodfacs> Numero du vecteur CERFACS en lecture: 59
Rdmodfacs> Valeur propre du vecteur en lecture: 5.117
Rdmodfacs> Numero du vecteur CERFACS en lecture: 60
Rdmodfacs> Valeur propre du vecteur en lecture: 5.233
Rdmodfacs> Numero du vecteur CERFACS en lecture: 61
Rdmodfacs> Valeur propre du vecteur en lecture: 5.322
Rdmodfacs> Numero du vecteur CERFACS en lecture: 62
Rdmodfacs> Valeur propre du vecteur en lecture: 5.396
Rdmodfacs> Numero du vecteur CERFACS en lecture: 63
Rdmodfacs> Valeur propre du vecteur en lecture: 5.450
Rdmodfacs> Numero du vecteur CERFACS en lecture: 64
Rdmodfacs> Valeur propre du vecteur en lecture: 5.702
Rdmodfacs> Numero du vecteur CERFACS en lecture: 65
Rdmodfacs> Valeur propre du vecteur en lecture: 5.860
Rdmodfacs> Numero du vecteur CERFACS en lecture: 66
Rdmodfacs> Valeur propre du vecteur en lecture: 6.030
Rdmodfacs> Numero du vecteur CERFACS en lecture: 67
Rdmodfacs> Valeur propre du vecteur en lecture: 6.317
Rdmodfacs> Numero du vecteur CERFACS en lecture: 68
Rdmodfacs> Valeur propre du vecteur en lecture: 6.774
Rdmodfacs> Numero du vecteur CERFACS en lecture: 69
Rdmodfacs> Valeur propre du vecteur en lecture: 6.894
Rdmodfacs> Numero du vecteur CERFACS en lecture: 70
Rdmodfacs> Valeur propre du vecteur en lecture: 6.959
Rdmodfacs> Numero du vecteur CERFACS en lecture: 71
Rdmodfacs> Valeur propre du vecteur en lecture: 7.199
Rdmodfacs> Numero du vecteur CERFACS en lecture: 72
Rdmodfacs> Valeur propre du vecteur en lecture: 7.293
Rdmodfacs> Numero du vecteur CERFACS en lecture: 73
Rdmodfacs> Valeur propre du vecteur en lecture: 7.702
Rdmodfacs> Numero du vecteur CERFACS en lecture: 74
Rdmodfacs> Valeur propre du vecteur en lecture: 7.933
Rdmodfacs> Numero du vecteur CERFACS en lecture: 75
Rdmodfacs> Valeur propre du vecteur en lecture: 8.066
Rdmodfacs> Numero du vecteur CERFACS en lecture: 76
Rdmodfacs> Valeur propre du vecteur en lecture: 8.131
Rdmodfacs> Numero du vecteur CERFACS en lecture: 77
Rdmodfacs> Valeur propre du vecteur en lecture: 8.267
Rdmodfacs> Numero du vecteur CERFACS en lecture: 78
Rdmodfacs> Valeur propre du vecteur en lecture: 8.365
Rdmodfacs> Numero du vecteur CERFACS en lecture: 79
Rdmodfacs> Valeur propre du vecteur en lecture: 8.450
Rdmodfacs> Numero du vecteur CERFACS en lecture: 80
Rdmodfacs> Valeur propre du vecteur en lecture: 8.673
Rdmodfacs> Numero du vecteur CERFACS en lecture: 81
Rdmodfacs> Valeur propre du vecteur en lecture: 8.791
Rdmodfacs> Numero du vecteur CERFACS en lecture: 82
Rdmodfacs> Valeur propre du vecteur en lecture: 9.085
Rdmodfacs> Numero du vecteur CERFACS en lecture: 83
Rdmodfacs> Valeur propre du vecteur en lecture: 9.301
Rdmodfacs> Numero du vecteur CERFACS en lecture: 84
Rdmodfacs> Valeur propre du vecteur en lecture: 9.354
Rdmodfacs> Numero du vecteur CERFACS en lecture: 85
Rdmodfacs> Valeur propre du vecteur en lecture: 9.751
Rdmodfacs> Numero du vecteur CERFACS en lecture: 86
Rdmodfacs> Valeur propre du vecteur en lecture: 9.782
Rdmodfacs> Numero du vecteur CERFACS en lecture: 87
Rdmodfacs> Valeur propre du vecteur en lecture: 9.906
Rdmodfacs> Numero du vecteur CERFACS en lecture: 88
Rdmodfacs> Valeur propre du vecteur en lecture: 10.43
Rdmodfacs> Numero du vecteur CERFACS en lecture: 89
Rdmodfacs> Valeur propre du vecteur en lecture: 10.65
Rdmodfacs> Numero du vecteur CERFACS en lecture: 90
Rdmodfacs> Valeur propre du vecteur en lecture: 10.85
Rdmodfacs> Numero du vecteur CERFACS en lecture: 91
Rdmodfacs> Valeur propre du vecteur en lecture: 11.08
Rdmodfacs> Numero du vecteur CERFACS en lecture: 92
Rdmodfacs> Valeur propre du vecteur en lecture: 11.31
Rdmodfacs> Numero du vecteur CERFACS en lecture: 93
Rdmodfacs> Valeur propre du vecteur en lecture: 11.44
Rdmodfacs> Numero du vecteur CERFACS en lecture: 94
Rdmodfacs> Valeur propre du vecteur en lecture: 11.48
Rdmodfacs> Numero du vecteur CERFACS en lecture: 95
Rdmodfacs> Valeur propre du vecteur en lecture: 11.91
Rdmodfacs> Numero du vecteur CERFACS en lecture: 96
Rdmodfacs> Valeur propre du vecteur en lecture: 12.13
Rdmodfacs> Numero du vecteur CERFACS en lecture: 97
Rdmodfacs> Valeur propre du vecteur en lecture: 12.28
Rdmodfacs> Numero du vecteur CERFACS en lecture: 98
Rdmodfacs> Valeur propre du vecteur en lecture: 12.45
Rdmodfacs> Numero du vecteur CERFACS en lecture: 99
Rdmodfacs> Valeur propre du vecteur en lecture: 12.73
Rdmodfacs> Numero du vecteur CERFACS en lecture: 100
Rdmodfacs> Valeur propre du vecteur en lecture: 13.00
Rdmodfacs> Numero du vecteur CERFACS en lecture: 101
Rdmodfacs> Valeur propre du vecteur en lecture: 13.16
Rdmodfacs> Numero du vecteur CERFACS en lecture: 102
Rdmodfacs> Valeur propre du vecteur en lecture: 13.31
Rdmodfacs> Numero du vecteur CERFACS en lecture: 103
Rdmodfacs> Valeur propre du vecteur en lecture: 13.47
Rdmodfacs> Numero du vecteur CERFACS en lecture: 104
Rdmodfacs> Valeur propre du vecteur en lecture: 13.59
Rdmodfacs> Numero du vecteur CERFACS en lecture: 105
Rdmodfacs> Valeur propre du vecteur en lecture: 13.92
Rdmodfacs> Numero du vecteur CERFACS en lecture: 106
Rdmodfacs> Valeur propre du vecteur en lecture: 14.25
%Rdmodfacs-Wn> More than 106 vectors in file.
Bfactors> 106 vectors, 297 coordinates in file.
Openam> file on opening on unit 12:
bfactors.pred
Bfactors> Best zero-eigenvalue found : 0.000000
Bfactors> 13 eigenvalues less than : 0.000000
Bfactors> Lowest non-zero eigenvalue : 0.019804
Bfactors> 93 eigenvectors will be considered.
Bfactors> Rotation-Tranlation modes are skipped.
Bfactors> Mass-weighted B-factors are computed.
(CHARMM units assumed for eigenvalues)
Bfactors> Correlation= 0.309 for 99 C-alpha atoms.
Bfactors> = 29.284 +/- 52.49
Bfactors> = 31.076 +/- 10.13
Bfactors> Shiftng-fct= 1.792
Bfactors> Scaling-fct= 0.193
Bfactors> Predicted, Scaled and Experimental B-factors are saved.
Bfactors> Normal end.
check_modes
Chkmod> Version 1.00, Bordeaux.
Getnam> Eigenvector filename ?
Getnam> 2604291037543353441.eigenfacs
Openam> file on opening on unit 10:
2604291037543353441.eigenfacs
Rdmodfacs> Old Blzpack file format detected.
Rdmodfacs> Numero du vecteur CERFACS en lecture: 1
Rdmodfacs> Frequence du vecteur en lecture: 3.3777E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 2
Rdmodfacs> Frequence du vecteur en lecture: 3.4150E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 3
Rdmodfacs> Frequence du vecteur en lecture: 3.4194E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 4
Rdmodfacs> Frequence du vecteur en lecture: 3.4232E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 5
Rdmodfacs> Frequence du vecteur en lecture: 3.4249E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 6
Rdmodfacs> Frequence du vecteur en lecture: 3.4296E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 7
Rdmodfacs> Frequence du vecteur en lecture: 3.4327E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 8
Rdmodfacs> Frequence du vecteur en lecture: 3.4340E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 9
Rdmodfacs> Frequence du vecteur en lecture: 3.4357E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 10
Rdmodfacs> Frequence du vecteur en lecture: 3.4376E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 11
Rdmodfacs> Frequence du vecteur en lecture: 3.4420E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 12
Rdmodfacs> Frequence du vecteur en lecture: 3.4472E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 13
Rdmodfacs> Frequence du vecteur en lecture: 3.4491E-03
Rdmodfacs> Numero du vecteur CERFACS en lecture: 14
Rdmodfacs> Frequence du vecteur en lecture: 15.28
Rdmodfacs> Numero du vecteur CERFACS en lecture: 15
Rdmodfacs> Frequence du vecteur en lecture: 20.00
Rdmodfacs> Numero du vecteur CERFACS en lecture: 16
Rdmodfacs> Frequence du vecteur en lecture: 24.53
Rdmodfacs> Numero du vecteur CERFACS en lecture: 17
Rdmodfacs> Frequence du vecteur en lecture: 25.79
Rdmodfacs> Numero du vecteur CERFACS en lecture: 18
Rdmodfacs> Frequence du vecteur en lecture: 36.68
Rdmodfacs> Numero du vecteur CERFACS en lecture: 19
Rdmodfacs> Frequence du vecteur en lecture: 41.89
Rdmodfacs> Numero du vecteur CERFACS en lecture: 20
Rdmodfacs> Frequence du vecteur en lecture: 42.54
Rdmodfacs> Numero du vecteur CERFACS en lecture: 21
Rdmodfacs> Frequence du vecteur en lecture: 48.73
Rdmodfacs> Numero du vecteur CERFACS en lecture: 22
Rdmodfacs> Frequence du vecteur en lecture: 51.55
Rdmodfacs> Numero du vecteur CERFACS en lecture: 23
Rdmodfacs> Frequence du vecteur en lecture: 52.92
Rdmodfacs> Numero du vecteur CERFACS en lecture: 24
Rdmodfacs> Frequence du vecteur en lecture: 61.33
Rdmodfacs> Numero du vecteur CERFACS en lecture: 25
Rdmodfacs> Frequence du vecteur en lecture: 64.07
Rdmodfacs> Numero du vecteur CERFACS en lecture: 26
Rdmodfacs> Frequence du vecteur en lecture: 73.48
Rdmodfacs> Numero du vecteur CERFACS en lecture: 27
Rdmodfacs> Frequence du vecteur en lecture: 79.02
Rdmodfacs> Numero du vecteur CERFACS en lecture: 28
Rdmodfacs> Frequence du vecteur en lecture: 83.72
Rdmodfacs> Numero du vecteur CERFACS en lecture: 29
Rdmodfacs> Frequence du vecteur en lecture: 92.64
Rdmodfacs> Numero du vecteur CERFACS en lecture: 30
Rdmodfacs> Frequence du vecteur en lecture: 102.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 31
Rdmodfacs> Frequence du vecteur en lecture: 106.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 32
Rdmodfacs> Frequence du vecteur en lecture: 112.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 33
Rdmodfacs> Frequence du vecteur en lecture: 115.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 34
Rdmodfacs> Frequence du vecteur en lecture: 117.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 35
Rdmodfacs> Frequence du vecteur en lecture: 123.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 36
Rdmodfacs> Frequence du vecteur en lecture: 129.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 37
Rdmodfacs> Frequence du vecteur en lecture: 130.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 38
Rdmodfacs> Frequence du vecteur en lecture: 136.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 39
Rdmodfacs> Frequence du vecteur en lecture: 137.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 40
Rdmodfacs> Frequence du vecteur en lecture: 138.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 41
Rdmodfacs> Frequence du vecteur en lecture: 146.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 42
Rdmodfacs> Frequence du vecteur en lecture: 150.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 43
Rdmodfacs> Frequence du vecteur en lecture: 154.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 44
Rdmodfacs> Frequence du vecteur en lecture: 158.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 45
Rdmodfacs> Frequence du vecteur en lecture: 171.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 46
Rdmodfacs> Frequence du vecteur en lecture: 173.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 47
Rdmodfacs> Frequence du vecteur en lecture: 176.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 48
Rdmodfacs> Frequence du vecteur en lecture: 179.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 49
Rdmodfacs> Frequence du vecteur en lecture: 192.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 50
Rdmodfacs> Frequence du vecteur en lecture: 193.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 51
Rdmodfacs> Frequence du vecteur en lecture: 203.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 52
Rdmodfacs> Frequence du vecteur en lecture: 206.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 53
Rdmodfacs> Frequence du vecteur en lecture: 213.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 54
Rdmodfacs> Frequence du vecteur en lecture: 222.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 55
Rdmodfacs> Frequence du vecteur en lecture: 224.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 56
Rdmodfacs> Frequence du vecteur en lecture: 227.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 57
Rdmodfacs> Frequence du vecteur en lecture: 233.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 58
Rdmodfacs> Frequence du vecteur en lecture: 238.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 59
Rdmodfacs> Frequence du vecteur en lecture: 245.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 60
Rdmodfacs> Frequence du vecteur en lecture: 248.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 61
Rdmodfacs> Frequence du vecteur en lecture: 250.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 62
Rdmodfacs> Frequence du vecteur en lecture: 252.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 63
Rdmodfacs> Frequence du vecteur en lecture: 253.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 64
Rdmodfacs> Frequence du vecteur en lecture: 259.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 65
Rdmodfacs> Frequence du vecteur en lecture: 262.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 66
Rdmodfacs> Frequence du vecteur en lecture: 266.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 67
Rdmodfacs> Frequence du vecteur en lecture: 272.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 68
Rdmodfacs> Frequence du vecteur en lecture: 282.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 69
Rdmodfacs> Frequence du vecteur en lecture: 285.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 70
Rdmodfacs> Frequence du vecteur en lecture: 286.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 71
Rdmodfacs> Frequence du vecteur en lecture: 291.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 72
Rdmodfacs> Frequence du vecteur en lecture: 293.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 73
Rdmodfacs> Frequence du vecteur en lecture: 301.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 74
Rdmodfacs> Frequence du vecteur en lecture: 305.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 75
Rdmodfacs> Frequence du vecteur en lecture: 308.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 76
Rdmodfacs> Frequence du vecteur en lecture: 309.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 77
Rdmodfacs> Frequence du vecteur en lecture: 312.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 78
Rdmodfacs> Frequence du vecteur en lecture: 314.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 79
Rdmodfacs> Frequence du vecteur en lecture: 315.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 80
Rdmodfacs> Frequence du vecteur en lecture: 319.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 81
Rdmodfacs> Frequence du vecteur en lecture: 322.0
Rdmodfacs> Numero du vecteur CERFACS en lecture: 82
Rdmodfacs> Frequence du vecteur en lecture: 327.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 83
Rdmodfacs> Frequence du vecteur en lecture: 331.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 84
Rdmodfacs> Frequence du vecteur en lecture: 332.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 85
Rdmodfacs> Frequence du vecteur en lecture: 339.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 86
Rdmodfacs> Frequence du vecteur en lecture: 339.6
Rdmodfacs> Numero du vecteur CERFACS en lecture: 87
Rdmodfacs> Frequence du vecteur en lecture: 341.8
Rdmodfacs> Numero du vecteur CERFACS en lecture: 88
Rdmodfacs> Frequence du vecteur en lecture: 350.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 89
Rdmodfacs> Frequence du vecteur en lecture: 354.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 90
Rdmodfacs> Frequence du vecteur en lecture: 357.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 91
Rdmodfacs> Frequence du vecteur en lecture: 361.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 92
Rdmodfacs> Frequence du vecteur en lecture: 365.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 93
Rdmodfacs> Frequence du vecteur en lecture: 367.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 94
Rdmodfacs> Frequence du vecteur en lecture: 367.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 95
Rdmodfacs> Frequence du vecteur en lecture: 374.7
Rdmodfacs> Numero du vecteur CERFACS en lecture: 96
Rdmodfacs> Frequence du vecteur en lecture: 378.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 97
Rdmodfacs> Frequence du vecteur en lecture: 380.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 98
Rdmodfacs> Frequence du vecteur en lecture: 383.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 99
Rdmodfacs> Frequence du vecteur en lecture: 387.4
Rdmodfacs> Numero du vecteur CERFACS en lecture: 100
Rdmodfacs> Frequence du vecteur en lecture: 391.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 101
Rdmodfacs> Frequence du vecteur en lecture: 393.9
Rdmodfacs> Numero du vecteur CERFACS en lecture: 102
Rdmodfacs> Frequence du vecteur en lecture: 396.2
Rdmodfacs> Numero du vecteur CERFACS en lecture: 103
Rdmodfacs> Frequence du vecteur en lecture: 398.5
Rdmodfacs> Numero du vecteur CERFACS en lecture: 104
Rdmodfacs> Frequence du vecteur en lecture: 400.3
Rdmodfacs> Numero du vecteur CERFACS en lecture: 105
Rdmodfacs> Frequence du vecteur en lecture: 405.1
Rdmodfacs> Numero du vecteur CERFACS en lecture: 106
Rdmodfacs> Frequence du vecteur en lecture: 409.9
%Rdmodfacs-Err> More than 106 vectors in file.
Chkmod> 106 vectors, 297 coordinates in file.
Chkmod> That is: 99 cartesian points.
Openam> file on opening on unit 11:
Chkmod.res
Chkmod> Collectivity=f(frequency) to be written in this file.
%Chkmod-Wn> Norm of vector 12 is: 0.9999 (instead of 1.0000).
%Chkmod-Wn> Norm of vector 13 is: 1.0001 (instead of 1.0000).
%Chkmod-Wn> Norm of vector 52 is: 1.0001 (instead of 1.0000).
Chkmod> Normal end.
0.0034 0.0183
0.0034 0.7363
0.0034 0.0171
0.0034 0.7904
0.0034 0.0344
0.0034 0.8017
0.0034 0.8868
0.0034 0.0249
0.0034 0.1757
0.0034 0.2405
0.0034 0.1126
0.0034 0.0857
0.0034 0.7193
15.2810 0.1867
19.9976 0.0900
24.5317 0.2936
25.7904 0.1806
36.6792 0.0572
41.8869 0.2932
42.5433 0.2594
48.7311 0.2324
51.5530 0.1442
52.9186 0.4031
61.3299 0.4922
64.0662 0.3555
73.4788 0.2306
79.0225 0.3109
83.7175 0.1752
92.6366 0.4033
102.0195 0.5549
106.3263 0.4671
112.8988 0.4998
115.3271 0.4307
117.1529 0.2917
123.2351 0.3720
129.3504 0.4708
130.3040 0.4008
136.6640 0.4162
137.3525 0.7346
138.2936 0.3843
146.2901 0.5589
150.4621 0.2998
154.2925 0.2412
157.9927 0.3006
171.8623 0.3098
173.6369 0.4329
176.6329 0.4343
179.1516 0.5282
192.3855 0.4867
193.7596 0.5734
203.9003 0.4244
206.0860 0.4223
213.3666 0.4720
222.5100 0.5094
224.6722 0.5506
227.4885 0.5187
233.1961 0.4650
238.3967 0.5101
245.6317 0.4030
248.4002 0.3054
250.5037 0.5251
252.2392 0.5336
253.4982 0.4448
259.2927 0.5631
262.8606 0.5644
266.6461 0.5588
272.9179 0.3474
282.6176 0.3616
285.1099 0.5371
286.4508 0.5655
291.3485 0.5038
293.2444 0.4916
301.3550 0.4874
305.8408 0.3912
308.3939 0.1673
309.6340 0.5172
312.2127 0.5888
314.0578 0.4655
315.6494 0.4296
319.7874 0.6078
321.9554 0.4469
327.2948 0.4129
331.1627 0.5911
332.1049 0.5822
339.0793 0.5469
339.6178 0.5315
341.7636 0.5843
350.6863 0.4548
354.3655 0.4501
357.6774 0.3822
361.4486 0.5268
365.1808 0.3796
367.2735 0.4531
367.9151 0.2404
374.7421 0.5336
378.1874 0.5495
380.5185 0.4838
383.1434 0.4248
387.4279 0.4672
391.5149 0.3235
393.9169 0.0774
396.1555 0.3934
398.5295 0.5145
400.3007 0.3965
405.1317 0.4815
409.9058 0.5675
getting mode 7
running: ../../bin/get_modes.sh 2604291037543353441 7 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 7
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.7.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.7.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.7.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 8
running: ../../bin/get_modes.sh 2604291037543353441 8 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 8
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.8.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.8.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.8.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 9
running: ../../bin/get_modes.sh 2604291037543353441 9 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 9
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.9.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.9.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.9.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 10
running: ../../bin/get_modes.sh 2604291037543353441 10 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 10
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.10.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.10.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.10.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 11
running: ../../bin/get_modes.sh 2604291037543353441 11 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 11
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.11.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.11.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.11.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 12
running: ../../bin/get_modes.sh 2604291037543353441 12 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 12
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.12.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.12.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.12.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 13
running: ../../bin/get_modes.sh 2604291037543353441 13 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 13
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.13.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.13.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.13.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 14
running: ../../bin/get_modes.sh 2604291037543353441 14 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 14
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.14.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.14.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.14.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 15
running: ../../bin/get_modes.sh 2604291037543353441 15 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 15
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.15.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.15.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.15.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 16
running: ../../bin/get_modes.sh 2604291037543353441 16 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 16
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.16.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.16.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.16.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 17
running: ../../bin/get_modes.sh 2604291037543353441 17 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 17
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.17.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.17.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.17.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 18
running: ../../bin/get_modes.sh 2604291037543353441 18 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 18
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.18.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.18.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.18.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 19
running: ../../bin/get_modes.sh 2604291037543353441 19 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 19
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.19.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.19.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.19.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 20
running: ../../bin/get_modes.sh 2604291037543353441 20 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 20
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.20.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.20.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.20.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 21
running: ../../bin/get_modes.sh 2604291037543353441 21 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 21
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.21.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.21.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.21.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 22
running: ../../bin/get_modes.sh 2604291037543353441 22 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 22
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.22.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.22.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.22.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 23
running: ../../bin/get_modes.sh 2604291037543353441 23 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 23
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.23.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.23.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.23.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 24
running: ../../bin/get_modes.sh 2604291037543353441 24 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 24
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.24.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.24.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.24.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 25
running: ../../bin/get_modes.sh 2604291037543353441 25 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 25
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.25.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.25.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.25.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 26
running: ../../bin/get_modes.sh 2604291037543353441 26 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 26
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.26.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.26.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.26.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 27
running: ../../bin/get_modes.sh 2604291037543353441 27 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 27
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.27.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.27.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.27.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 28
running: ../../bin/get_modes.sh 2604291037543353441 28 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 28
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.28.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.28.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.28.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 29
running: ../../bin/get_modes.sh 2604291037543353441 29 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 29
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.29.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.29.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.29.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 30
running: ../../bin/get_modes.sh 2604291037543353441 30 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 30
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.30.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.30.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.30.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
getting mode 31
running: ../../bin/get_modes.sh 2604291037543353441 31 -100 100 20 on 0
normal mode computation
generate a series of perturbations for mode 31
calculating perturbed structure for DQ=-100
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=-20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=0
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=20
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=40
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=60
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=80
2604291037543353441.eigenfacs
2604291037543353441.atom
calculating perturbed structure for DQ=100
2604291037543353441.eigenfacs
2604291037543353441.atom
making animated gifs
11 models are in 2604291037543353441.31.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.31.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
11 models are in 2604291037543353441.31.pdb, 1 models will be skipped
MODEL 1 will be plotted
MODEL 3 will be plotted
MODEL 5 will be plotted
MODEL 7 will be plotted
MODEL 9 will be plotted
MODEL 11 will be plotted
making thumbnail 100x100
making small animated gif 100x100
making animated gif 300x300
2604291037543353441.10.pdb
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2604291037543353441.29.pdb
2604291037543353441.30.pdb
2604291037543353441.31.pdb
2604291037543353441.7.pdb
2604291037543353441.8.pdb
2604291037543353441.9.pdb
STDERR:
real 0m0.426s
user 0m0.420s
sys 0m0.005s
rm: cannot remove '2604291037543353441.sdijb': No such file or directory
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If you find results from this site helpful for your research, please cite one of our papers:
elNémo
is maintained by Yves-Henri Sanejouand.
It was developed
by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.
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