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***  TRANSFERASE 20-MAR-20 7BOV  ***

Normal Mode Analysis for ID 260508073110911165

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

WARNING: there are 2 low-collectivity modes among your first 5 modes (see below)! The degree of collectivity indicates the fraction of residues that are significantly affected by a given mode. While low-frequency modes are expected to have collective character, computed ones sometimes happen to be localized. In such cases, they correspond to motions of some extended parts of the system, as often observed in crystallographic protein structures for N- and C-termini.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.5753
mode 8 1.11 0.5627
mode 9 1.37 0.5575
mode 10 1.56 0.0379
mode 11 1.69 0.0503
mode 12 1.77 0.3336
mode 13 1.96 0.2675
mode 14 2.20 0.5425
mode 15 2.26 0.3632
mode 16 2.32 0.0429
mode 17 2.40 0.1435
mode 18 2.50 0.0429
mode 19 2.50 0.1270
mode 20 2.59 0.2062
mode 21 2.62 0.0671
mode 22 2.68 0.2758
mode 23 2.83 0.1217
mode 24 2.88 0.3009
mode 25 2.94 0.4124
mode 26 3.03 0.2281
mode 27 3.04 0.2985
mode 28 3.23 0.2998
mode 29 3.38 0.2755
mode 30 3.43 0.1307
mode 31 3.54 0.1439
mode 32 3.58 0.3562
mode 33 3.65 0.3157
mode 34 3.67 0.2550
mode 35 3.71 0.2853
mode 36 3.78 0.2686
mode 37 3.84 0.1518
mode 38 3.91 0.3770
mode 39 4.02 0.2921
mode 40 4.06 0.3802
mode 41 4.13 0.2791
mode 42 4.19 0.3550
mode 43 4.21 0.4183
mode 44 4.27 0.3179
mode 45 4.36 0.2237
mode 46 4.39 0.3031
mode 47 4.45 0.2630
mode 48 4.53 0.3048
mode 49 4.57 0.2016
mode 50 4.62 0.3513
mode 51 4.63 0.1225
mode 52 4.64 0.3979
mode 53 4.72 0.2662
mode 54 4.76 0.3646
mode 55 4.82 0.2999
mode 56 4.86 0.4813
mode 57 4.92 0.3945
mode 58 4.96 0.2970
mode 59 5.02 0.3255
mode 60 5.05 0.1070
mode 61 5.10 0.3162
mode 62 5.13 0.3108
mode 63 5.16 0.3911
mode 64 5.20 0.2097
mode 65 5.23 0.3502
mode 66 5.30 0.4420
mode 67 5.31 0.4434
mode 68 5.32 0.3538
mode 69 5.38 0.3065
mode 70 5.40 0.3928
mode 71 5.46 0.2677
mode 72 5.49 0.3392
mode 73 5.50 0.2985
mode 74 5.53 0.4055
mode 75 5.60 0.3799
mode 76 5.61 0.2841
mode 77 5.66 0.3430
mode 78 5.69 0.2987
mode 79 5.72 0.5024
mode 80 5.74 0.4479
mode 81 5.75 0.2583
mode 82 5.81 0.3951
mode 83 5.85 0.2611
mode 84 5.87 0.4338
mode 85 5.89 0.3057
mode 86 5.92 0.2742
mode 87 5.95 0.2607
mode 88 5.96 0.1567
mode 89 6.07 0.4361
mode 90 6.10 0.4158
mode 91 6.13 0.3034
mode 92 6.20 0.3425
mode 93 6.24 0.4081
mode 94 6.26 0.4022
mode 95 6.31 0.1983
mode 96 6.37 0.3691
mode 97 6.39 0.4155
mode 98 6.40 0.3070
mode 99 6.48 0.3515
mode 100 6.50 0.3072
mode 101 6.54 0.3817
mode 102 6.58 0.3423
mode 103 6.65 0.3719
mode 104 6.67 0.3633
mode 105 6.68 0.3054
mode 106 6.76 0.3532

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.