CNRS Nantes University US2B US2B
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***  TRANSFERASE 02-MAY-08 3D0Q  ***

Normal Mode Analysis for ID 260508084400943806

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.6192
mode 8 1.19 0.6605
mode 9 1.48 0.7436
mode 10 1.82 0.3605
mode 11 1.85 0.3226
mode 12 2.03 0.4813
mode 13 2.12 0.7346
mode 14 2.31 0.6770
mode 15 2.51 0.5879
mode 16 2.58 0.5638
mode 17 2.65 0.5162
mode 18 2.72 0.4365
mode 19 2.99 0.3576
mode 20 3.27 0.5379
mode 21 3.31 0.5347
mode 22 3.46 0.6982
mode 23 3.48 0.4560
mode 24 3.59 0.6032
mode 25 3.60 0.5832
mode 26 3.71 0.5204
mode 27 3.85 0.5459
mode 28 3.91 0.4925
mode 29 3.97 0.2765
mode 30 4.04 0.2480
mode 31 4.18 0.5239
mode 32 4.21 0.5476
mode 33 4.23 0.6407
mode 34 4.37 0.4708
mode 35 4.42 0.6160
mode 36 4.47 0.2628
mode 37 4.51 0.4510
mode 38 4.54 0.1735
mode 39 4.60 0.3485
mode 40 4.61 0.4162
mode 41 4.69 0.5386
mode 42 4.75 0.3564
mode 43 4.82 0.3357
mode 44 4.90 0.5682
mode 45 4.95 0.4018
mode 46 4.97 0.5509
mode 47 5.04 0.5142
mode 48 5.06 0.5189
mode 49 5.15 0.6127
mode 50 5.22 0.5374
mode 51 5.26 0.4969
mode 52 5.30 0.4249
mode 53 5.34 0.5464
mode 54 5.42 0.4053
mode 55 5.45 0.3842
mode 56 5.48 0.4527
mode 57 5.56 0.6089
mode 58 5.59 0.3778
mode 59 5.64 0.5351
mode 60 5.70 0.4580
mode 61 5.74 0.4262
mode 62 5.80 0.5259
mode 63 5.83 0.4467
mode 64 5.85 0.5187
mode 65 5.89 0.5241
mode 66 5.91 0.2817
mode 67 5.96 0.4459
mode 68 5.97 0.4604
mode 69 6.02 0.4181
mode 70 6.07 0.4396
mode 71 6.10 0.4629
mode 72 6.15 0.4367
mode 73 6.16 0.4704
mode 74 6.22 0.4848
mode 75 6.24 0.5184
mode 76 6.28 0.4887
mode 77 6.30 0.5373
mode 78 6.36 0.5899
mode 79 6.40 0.4908
mode 80 6.44 0.5983
mode 81 6.47 0.5763
mode 82 6.52 0.4470
mode 83 6.55 0.5039
mode 84 6.58 0.4272
mode 85 6.63 0.4595
mode 86 6.64 0.5605
mode 87 6.67 0.3968
mode 88 6.71 0.5188
mode 89 6.72 0.5444
mode 90 6.73 0.3380
mode 91 6.77 0.4896
mode 92 6.80 0.5327
mode 93 6.81 0.5562
mode 94 6.85 0.5410
mode 95 6.87 0.5453
mode 96 6.92 0.4062
mode 97 6.99 0.5640
mode 98 7.01 0.3948
mode 99 7.06 0.4787
mode 100 7.08 0.4720
mode 101 7.09 0.3657
mode 102 7.12 0.5182
mode 103 7.14 0.5179
mode 104 7.18 0.4349
mode 105 7.20 0.5254
mode 106 7.24 0.4976

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.