Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* VIRAL PROTEIN 19-APR-18 5ZQK *

<R²> analysis for 2605110916331659646

--- normal mode 33 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.0493
GLY 6 0.0145
GLU 7 0.0181
THR 8 0.0157
LEU 9 0.0101
GLY 10 0.0116
GLU 11 0.0080
LYS 12 0.0052
TRP 13 0.0058
LYS 14 0.0046
ASN 15 0.0074
ARG 16 0.0137
LEU 17 0.0129
ASN 18 0.0110
ALA 19 0.0177
LEU 20 0.0223
GLY 21 0.0365
LYS 22 0.0436
SER 23 0.0447
GLU 24 0.0327
PHE 25 0.0278
GLN 26 0.0278
ILE 27 0.0262
TYR 28 0.0214
LYS 29 0.0233
LYS 30 0.0246
SER 31 0.0215
GLY 32 0.0243
ILE 33 0.0233
GLN 34 0.0244
GLU 35 0.0213
VAL 36 0.0285
ASP 37 0.0295
ARG 38 0.0285
THR 39 0.0298
LEU 40 0.0297
ALA 41 0.0318
LYS 42 0.0362
GLU 43 0.0365
GLY 44 0.0320
ILE 45 0.0326
LYS 46 0.0470
ARG 47 0.0428
GLY 48 0.0364
GLU 49 0.0250
THR 50 0.0171
ASP 51 0.0148
HIS 52 0.0169
HIS 53 0.0183
ALA 54 0.0172
VAL 55 0.0155
SER 56 0.0131
ARG 57 0.0134
GLY 58 0.0111
SER 59 0.0072
ALA 60 0.0096
LYS 61 0.0035
LEU 62 0.0021
ARG 63 0.0038
TRP 64 0.0056
PHE 65 0.0054
VAL 66 0.0129
GLU 67 0.0136
ARG 68 0.0163
ASN 69 0.0179
LEU 70 0.0166
VAL 71 0.0185
THR 72 0.0213
PRO 73 0.0216
GLU 74 0.0238
GLY 75 0.0254
LYS 76 0.0256
VAL 77 0.0229
VAL 78 0.0200
ASP 79 0.0176
LEU 80 0.0146
GLY 81 0.0209
CYS 82 0.0160
GLY 83 0.0127
ARG 84 0.0095
GLY 85 0.0102
GLY 86 0.0074
TRP 87 0.0083
SER 88 0.0084
TYR 89 0.0087
TYR 90 0.0100
CYS 91 0.0142
GLY 92 0.0124
GLY 93 0.0156
LEU 94 0.0197
LYS 95 0.0235
ASN 96 0.0276
VAL 97 0.0238
LYS 98 0.0231
GLU 99 0.0200
VAL 100 0.0170
LYS 101 0.0183
GLY 102 0.0186
LEU 103 0.0197
THR 104 0.0200
LYS 105 0.0207
GLY 106 0.0158
GLY 107 0.0207
PRO 108 0.0333
GLY 109 0.0388
HIS 110 0.0276
GLU 111 0.0193
GLU 112 0.0118
PRO 113 0.0092
ILE 114 0.0094
PRO 115 0.0067
MET 116 0.0081
SER 117 0.0076
THR 118 0.0095
TYR 119 0.0080
GLY 120 0.0055
TRP 121 0.0050
ASN 122 0.0041
LEU 123 0.0087
VAL 124 0.0090
ARG 125 0.0103
LEU 126 0.0121
GLN 127 0.0141
SER 128 0.0152
GLY 129 0.0179
VAL 130 0.0207
ASP 131 0.0150
VAL 132 0.0158
PHE 133 0.0101
PHE 134 0.0157
THR 135 0.0206
PRO 136 0.0227
PRO 137 0.0203
GLU 138 0.0237
LYS 139 0.0243
CYS 140 0.0245
ASP 141 0.0236
THR 142 0.0208
LEU 143 0.0169
LEU 144 0.0153
CYS 145 0.0116
ASP 146 0.0114
ILE 147 0.0092
GLY 148 0.0098
GLU 149 0.0112
SER 150 0.0140
SER 151 0.0125
PRO 152 0.0121
ASN 153 0.0124
PRO 154 0.0133
THR 155 0.0136
VAL 156 0.0117
GLU 157 0.0129
ALA 158 0.0137
GLY 159 0.0118
ARG 160 0.0111
THR 161 0.0112
LEU 162 0.0099
ARG 163 0.0047
VAL 164 0.0061
LEU 165 0.0077
ASN 166 0.0043
LEU 167 0.0050
VAL 168 0.0080
GLU 169 0.0030
ASN 170 0.0092
TRP 171 0.0141
LEU 172 0.0121
ASN 173 0.0128
ASN 174 0.0126
ASN 175 0.0184
THR 176 0.0172
GLN 177 0.0179
PHE 178 0.0147
CYS 179 0.0144
ILE 180 0.0109
LYS 181 0.0137
VAL 182 0.0139
LEU 183 0.0137
ASN 184 0.0150
PRO 185 0.0170
TYR 186 0.0188
MET 187 0.0175
PRO 188 0.0204
SER 189 0.0205
VAL 190 0.0201
ILE 191 0.0256
GLU 192 0.0268
LYS 193 0.0203
MET 194 0.0215
GLU 195 0.0279
ALA 196 0.0214
LEU 197 0.0148
GLN 198 0.0202
ARG 199 0.0223
LYS 200 0.0148
TYR 201 0.0111
GLY 202 0.0167
GLY 203 0.0186
ALA 204 0.0201
LEU 205 0.0187
VAL 206 0.0074
ARG 207 0.0051
ASN 208 0.0065
PRO 209 0.0060
LEU 210 0.0096
SER 211 0.0175
ARG 212 0.0165
ASN 213 0.0144
SER 214 0.0137
THR 215 0.0140
HIS 216 0.0135
GLU 217 0.0129
MET 218 0.0137
TYR 219 0.0135
TRP 220 0.0133
VAL 221 0.0147
SER 222 0.0151
ASN 223 0.0219
ALA 224 0.0228
SER 225 0.0232
GLY 226 0.0415
ASN 227 0.0406
ILE 228 0.0320
VAL 229 0.0347
SER 230 0.0400
SER 231 0.0331
VAL 232 0.0255
ASN 233 0.0225
MET 234 0.0263
ILE 235 0.0234
SER 236 0.0131
ARG 237 0.0144
MET 238 0.0222
LEU 239 0.0180
ILE 240 0.0140
ASN 241 0.0274
ARG 242 0.0279
PHE 243 0.0264
THR 244 0.0333
MET 245 0.0370
ARG 246 0.0493
HIS 247 0.0345
LYS 248 0.0339
LYS 249 0.0229
ALA 250 0.0256
THR 251 0.0238
TYR 252 0.0247
GLU 253 0.0271
PRO 254 0.0291
ASP 255 0.0280
VAL 256 0.0150
ASP 257 0.0149
LEU 258 0.0122
GLY 259 0.0128
SER 260 0.0111
GLY 261 0.0065
THR 262 0.0051
ARG 263 0.0057
ASN 264 0.0068
ILE 265 0.0104
GLY 266 0.0129
ILE 267 0.0119
GLU 268 0.0107
SER 269 0.0102
GLU 270 0.0090
THR 271 0.0072
PRO 272 0.0069
ASN 273 0.0069
LEU 274 0.0070
ASP 275 0.0069
ILE 276 0.0038
ILE 277 0.0041
GLY 278 0.0052
LYS 279 0.0050
ARG 280 0.0044
ILE 281 0.0067
GLU 282 0.0094
LYS 283 0.0083
ILE 284 0.0066
LYS 285 0.0096
GLN 286 0.0131
GLU 287 0.0105
HIS 288 0.0086
GLU 289 0.0129
THR 290 0.0121
SER 291 0.0070
TRP 292 0.0078
HIS 293 0.0089
TYR 294 0.0097
ASP 295 0.0097
GLN 296 0.0076
ASP 297 0.0073
HIS 298 0.0068
PRO 299 0.0074
TYR 300 0.0080
LYS 301 0.0085
THR 302 0.0075
TRP 303 0.0067
ALA 304 0.0073
TYR 305 0.0074
HIS 306 0.0082
GLY 307 0.0079
SER 308 0.0064
TYR 309 0.0053
GLU 310 0.0045
THR 311 0.0059
LYS 312 0.0065
GLN 313 0.0066
THR 314 0.0067
GLY 315 0.0069
SER 316 0.0055
ALA 317 0.0056
SER 318 0.0043
SER 319 0.0035
MET 320 0.0025
VAL 321 0.0007
ASN 322 0.0007
GLY 323 0.0004
VAL 324 0.0005
VAL 325 0.0009
ARG 326 0.0006
LEU 327 0.0011
LEU 328 0.0013
THR 329 0.0014
LYS 330 0.0016
PRO 331 0.0015
TRP 332 0.0012
ASP 333 0.0009
VAL 334 0.0013
ILE 335 0.0016
PRO 336 0.0016
MET 337 0.0026
VAL 338 0.0020
THR 339 0.0013
GLN 340 0.0023
MET 341 0.0038
ALA 342 0.0040
MET 343 0.0046
THR 344 0.0053
ASP 345 0.0056
THR 346 0.0067
THR 347 0.0067
PRO 348 0.0070
PHE 349 0.0072
GLY 350 0.0071
GLN 351 0.0062
GLN 352 0.0061
ARG 353 0.0064
VAL 354 0.0062
PHE 355 0.0059
LYS 356 0.0057
GLU 357 0.0057
LYS 358 0.0059
VAL 359 0.0060
ASP 360 0.0061
THR 361 0.0064
ARG 362 0.0053
THR 363 0.0048
GLN 364 0.0044
GLU 365 0.0033
PRO 366 0.0051
LYS 367 0.0051
GLU 368 0.0068
GLY 369 0.0063
THR 370 0.0053
LYS 371 0.0058
LYS 372 0.0059
LEU 373 0.0046
MET 374 0.0050
LYS 375 0.0063
ILE 376 0.0052
THR 377 0.0048
ALA 378 0.0053
GLU 379 0.0056
TRP 380 0.0050
LEU 381 0.0043
TRP 382 0.0037
LYS 383 0.0042
GLU 384 0.0045
LEU 385 0.0040
GLY 386 0.0038
LYS 387 0.0048
LYS 388 0.0038
LYS 389 0.0026
THR 390 0.0029
PRO 391 0.0041
ARG 392 0.0047
MET 393 0.0056
CYS 394 0.0054
THR 395 0.0069
ARG 396 0.0059
GLU 397 0.0063
GLU 398 0.0069
PHE 399 0.0064
THR 400 0.0060
ARG 401 0.0080
LYS 402 0.0080
VAL 403 0.0074
ARG 404 0.0074
SER 405 0.0094
ASN 406 0.0112
ALA 407 0.0111
ALA 408 0.0096
LEU 409 0.0064
GLY 410 0.0048
ALA 411 0.0099
ILE 412 0.0092
PHE 413 0.0101
THR 414 0.0094
ASP 415 0.0107
GLU 416 0.0210
ASN 417 0.0216
LYS 418 0.0179
TRP 419 0.0169
LYS 420 0.0201
SER 421 0.0167
ALA 422 0.0126
ARG 423 0.0111
GLU 424 0.0136
ALA 425 0.0115
VAL 426 0.0084
GLU 427 0.0099
ASP 428 0.0122
SER 429 0.0115
GLY 430 0.0130
PHE 431 0.0084
TRP 432 0.0057
GLU 433 0.0063
LEU 434 0.0072
VAL 435 0.0054
ASP 436 0.0049
LYS 437 0.0053
GLU 438 0.0059
ARG 439 0.0054
ASN 440 0.0053
LEU 441 0.0064
HIS 442 0.0059
LEU 443 0.0064
GLU 444 0.0064
GLY 445 0.0057
LYS 446 0.0043
CYS 447 0.0043
GLU 448 0.0044
THR 449 0.0045
CYS 450 0.0044
VAL 451 0.0019
TYR 452 0.0019
ASN 453 0.0021
MET 454 0.0029
MET 455 0.0034
GLY 456 0.0050
LYS 457 0.0048
ARG 458 0.0045
GLU 459 0.0044
LYS 460 0.0042
LYS 461 0.0050
LEU 462 0.0046
GLY 463 0.0049
ALA 468 0.0068
LYS 469 0.0064
GLY 470 0.0061
SER 471 0.0059
ARG 472 0.0057
ALA 473 0.0045
ILE 474 0.0038
TRP 475 0.0032
TYR 476 0.0032
MET 477 0.0043
TRP 478 0.0079
LEU 479 0.0068
GLY 480 0.0061
ALA 481 0.0066
ARG 482 0.0065
PHE 483 0.0054
LEU 484 0.0055
GLU 485 0.0051
PHE 486 0.0051
GLU 487 0.0055
ALA 488 0.0051
LEU 489 0.0033
GLY 490 0.0031
PHE 491 0.0025
LEU 492 0.0012
ASN 493 0.0013
GLU 494 0.0017
ASP 495 0.0007
HIS 496 0.0009
TRP 497 0.0014
PHE 498 0.0026
SER 499 0.0032
ARG 500 0.0034
GLU 501 0.0039
ASN 502 0.0036
SER 503 0.0033
LEU 504 0.0036
SER 505 0.0032
GLY 506 0.0031
VAL 507 0.0032
GLU 508 0.0020
GLY 509 0.0021
GLU 510 0.0018
GLY 511 0.0017
LEU 512 0.0015
HIS 513 0.0015
LYS 514 0.0010
LEU 515 0.0011
GLY 516 0.0010
TYR 517 0.0006
ILE 518 0.0013
LEU 519 0.0015
ARG 520 0.0013
ASP 521 0.0008
VAL 522 0.0010
SER 523 0.0015
LYS 524 0.0014
LYS 525 0.0015
GLU 526 0.0018
GLY 527 0.0017
GLY 528 0.0019
ALA 529 0.0020
MET 530 0.0018
TYR 531 0.0021
ALA 532 0.0028
ASP 533 0.0026
ASP 534 0.0031
THR 535 0.0035
ALA 536 0.0039
GLY 537 0.0043
TRP 538 0.0040
ASP 539 0.0034
THR 540 0.0033
ARG 541 0.0035
ILE 542 0.0032
THR 543 0.0034
LEU 544 0.0027
GLU 545 0.0032
ASP 546 0.0036
LEU 547 0.0030
LYS 548 0.0026
ASN 549 0.0034
GLU 550 0.0028
GLU 551 0.0019
MET 552 0.0028
VAL 553 0.0026
THR 554 0.0037
ASN 555 0.0051
HIS 556 0.0044
MET 557 0.0048
GLU 558 0.0076
GLY 559 0.0085
GLU 560 0.0081
HIS 561 0.0067
LYS 562 0.0063
LYS 563 0.0063
LEU 564 0.0057
ALA 565 0.0042
GLU 566 0.0043
ALA 567 0.0044
ILE 568 0.0027
PHE 569 0.0018
LYS 570 0.0023
LEU 571 0.0028
THR 572 0.0025
TYR 573 0.0011
GLN 574 0.0015
ASN 575 0.0022
LYS 576 0.0025
VAL 577 0.0033
VAL 578 0.0023
ARG 579 0.0027
VAL 580 0.0039
GLN 581 0.0048
ARG 582 0.0061
PRO 583 0.0066
THR 584 0.0066
PRO 585 0.0084
ARG 586 0.0085
GLY 587 0.0085
THR 588 0.0066
VAL 589 0.0055
MET 590 0.0046
ASP 591 0.0052
ILE 592 0.0053
ILE 593 0.0057
SER 594 0.0048
ARG 595 0.0041
ARG 596 0.0032
ASP 597 0.0030
GLN 598 0.0021
ARG 599 0.0017
GLY 600 0.0008
SER 601 0.0008
GLY 602 0.0009
GLN 603 0.0013
VAL 604 0.0013
VAL 605 0.0018
THR 606 0.0017
TYR 607 0.0016
GLY 608 0.0029
LEU 609 0.0026
ASN 610 0.0026
THR 611 0.0030
PHE 612 0.0030
THR 613 0.0039
ASN 614 0.0038
MET 615 0.0038
GLU 616 0.0037
ALA 617 0.0035
GLN 618 0.0030
LEU 619 0.0031
ILE 620 0.0032
ARG 621 0.0023
GLN 622 0.0021
MET 623 0.0033
GLU 624 0.0029
GLY 625 0.0020
GLU 626 0.0031
GLY 627 0.0043
VAL 628 0.0061
PHE 629 0.0067
LYS 630 0.0071
SER 631 0.0063
ILE 632 0.0051
GLN 633 0.0057
GLN 634 0.0083
LEU 635 0.0090
THR 636 0.0119
ALA 637 0.0140
THR 638 0.0130
GLU 639 0.0102
GLU 640 0.0108
ILE 641 0.0115
ALA 642 0.0091
VAL 643 0.0063
LYS 644 0.0075
ASN 645 0.0067
TRP 646 0.0047
LEU 647 0.0052
VAL 648 0.0056
ARG 649 0.0043
VAL 650 0.0031
GLY 651 0.0040
ARG 652 0.0041
GLU 653 0.0028
ARG 654 0.0026
LEU 655 0.0032
SER 656 0.0029
ARG 657 0.0022
MET 658 0.0025
ALA 659 0.0026
ILE 660 0.0028
SER 661 0.0030
GLY 662 0.0032
ASP 663 0.0033
ASP 664 0.0029
CYS 665 0.0025
VAL 666 0.0021
VAL 667 0.0019
LYS 668 0.0014
PRO 669 0.0014
LEU 670 0.0019
ASP 671 0.0019
ASP 672 0.0017
ARG 673 0.0023
PHE 674 0.0014
ALA 675 0.0016
SER 676 0.0014
ALA 677 0.0016
LEU 678 0.0016
THR 679 0.0022
ALA 680 0.0034
LEU 681 0.0032
ASN 682 0.0033
ASP 683 0.0038
MET 684 0.0044
GLY 685 0.0044
LYS 686 0.0041
VAL 687 0.0036
ARG 688 0.0037
LYS 689 0.0049
ASP 690 0.0063
ILE 691 0.0059
GLN 692 0.0067
GLN 693 0.0048
TRP 694 0.0036
GLU 695 0.0043
PRO 696 0.0034
SER 697 0.0033
ARG 698 0.0041
GLY 699 0.0034
TRP 700 0.0034
TRP 700 0.0034
ASN 701 0.0036
ASP 702 0.0033
TRP 703 0.0020
THR 704 0.0024
GLN 705 0.0029
VAL 706 0.0025
PRO 707 0.0029
PHE 708 0.0016
CYS 709 0.0016
SER 710 0.0019
HIS 711 0.0017
HIS 712 0.0017
PHE 713 0.0012
HIS 714 0.0013
GLU 715 0.0014
LEU 716 0.0017
ILE 717 0.0020
MET 718 0.0032
LYS 719 0.0037
ASP 720 0.0041
GLY 721 0.0036
ARG 722 0.0034
VAL 723 0.0018
LEU 724 0.0016
VAL 725 0.0012
VAL 726 0.0014
PRO 727 0.0014
CYS 728 0.0006
ARG 729 0.0006
ASN 730 0.0007
GLN 731 0.0007
ASP 732 0.0011
GLU 733 0.0015
LEU 734 0.0017
ILE 735 0.0015
GLY 736 0.0013
ARG 737 0.0015
ALA 738 0.0019
ARG 739 0.0014
ILE 740 0.0015
SER 741 0.0016
GLN 742 0.0021
GLY 743 0.0028
ALA 744 0.0027
GLY 745 0.0022
TRP 746 0.0017
SER 747 0.0012
LEU 748 0.0017
ARG 749 0.0017
GLU 750 0.0013
THR 751 0.0011
ALA 752 0.0012
CYS 753 0.0007
LEU 754 0.0005
GLY 755 0.0005
LYS 756 0.0007
SER 757 0.0006
TYR 758 0.0004
ALA 759 0.0003
GLN 760 0.0004
MET 761 0.0005
TRP 762 0.0004
SER 763 0.0015
LEU 764 0.0014
MET 765 0.0012
TYR 766 0.0012
PHE 767 0.0013
HIS 768 0.0011
ARG 769 0.0011
ARG 770 0.0010
ASP 771 0.0011
LEU 772 0.0012
ARG 773 0.0016
LEU 774 0.0016
ALA 775 0.0016
ALA 776 0.0017
ASN 777 0.0016
ALA 778 0.0012
ILE 779 0.0006
CYS 780 0.0011
SER 781 0.0010
ALA 782 0.0005
VAL 783 0.0013
PRO 784 0.0022
SER 785 0.0024
HIS 786 0.0029
TRP 787 0.0022
VAL 788 0.0005
PRO 789 0.0006
THR 790 0.0007
SER 791 0.0008
ARG 792 0.0008
THR 793 0.0014
THR 794 0.0012
TRP 795 0.0012
SER 796 0.0011
ILE 797 0.0012
HIS 798 0.0015
ALA 799 0.0014
THR 800 0.0011
HIS 801 0.0012
GLU 802 0.0011
TRP 803 0.0010
MET 804 0.0014
THR 805 0.0018
THR 806 0.0021
GLU 807 0.0021
ASP 808 0.0028
MET 809 0.0027
LEU 810 0.0028
THR 811 0.0024
VAL 812 0.0021
TRP 813 0.0027
ASN 814 0.0028
ARG 815 0.0026
VAL 816 0.0021
TRP 817 0.0020
ILE 818 0.0030
GLN 819 0.0031
GLU 820 0.0024
ASN 821 0.0019
PRO 822 0.0016
TRP 823 0.0016
MET 824 0.0027
GLU 825 0.0034
ASP 826 0.0044
LYS 827 0.0045
THR 828 0.0050
PRO 829 0.0049
VAL 830 0.0046
GLU 831 0.0054
SER 832 0.0048
TRP 833 0.0037
GLU 834 0.0040
GLU 835 0.0037
ILE 836 0.0028
PRO 837 0.0023
TYR 838 0.0013
LEU 839 0.0011
GLY 840 0.0009
LYS 841 0.0010
ARG 842 0.0008
GLU 843 0.0008
ASP 844 0.0009
GLN 845 0.0009
TRP 846 0.0008
CYS 847 0.0009
GLY 848 0.0012
SER 849 0.0012
LEU 850 0.0012
ILE 851 0.0013
GLY 852 0.0015
LEU 853 0.0020
THR 854 0.0026
SER 855 0.0022
ARG 856 0.0020
ALA 857 0.0028
THR 858 0.0040
TRP 859 0.0029
ALA 860 0.0034
LYS 861 0.0047
ASN 862 0.0044
ILE 863 0.0028
GLN 864 0.0021
THR 865 0.0025
ALA 866 0.0022
ILE 867 0.0011
ASN 868 0.0013
GLN 869 0.0024
VAL 870 0.0019
ARG 871 0.0018
SER 872 0.0029
LEU 873 0.0036
ILE 874 0.0034
GLY 875 0.0039
ASN 876 0.0039
GLU 877 0.0039
GLU 878 0.0036
TYR 879 0.0024
THR 880 0.0026
ASP 881 0.0021
TYR 882 0.0029
MET 883 0.0032

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.

Should you encounter any unexpected behaviour, please let us know. elNémo has been relocated. **Some cleaning from time to time** Sorry for the inconvenience.

*** VIRAL PROTEIN 19-APR-18 5ZQK ***

<R2> analysis for 2605110916331659646

--- normal mode 33 ---

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* VIRAL PROTEIN 19-APR-18 5ZQK *

<R²> analysis for 2605110916331659646