CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  VIRAL PROTEIN 19-APR-18 5ZQK  ***

<R2> analysis for 2605110916331659646

---  normal mode 80  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0503
GLY 60.0060
GLU 70.0060
THR 80.0036
LEU 90.0015
GLY 100.0011
GLU 110.0028
LYS 120.0029
TRP 130.0018
LYS 140.0020
ASN 150.0028
ARG 160.0029
LEU 170.0026
ASN 180.0034
ALA 190.0035
LEU 200.0028
GLY 210.0021
LYS 220.0032
SER 230.0050
GLU 240.0047
PHE 250.0025
GLN 260.0022
ILE 270.0021
TYR 280.0021
LYS 290.0021
LYS 300.0020
SER 310.0005
GLY 320.0015
ILE 330.0019
GLN 340.0021
GLU 350.0011
VAL 360.0023
ASP 370.0003
ARG 380.0021
THR 390.0023
LEU 400.0007
ALA 410.0023
LYS 420.0038
GLU 430.0026
GLY 440.0010
ILE 450.0041
LYS 460.0043
ARG 470.0018
GLY 480.0033
GLU 490.0034
THR 500.0062
ASP 510.0049
HIS 520.0043
HIS 530.0039
ALA 540.0038
VAL 550.0040
SER 560.0037
ARG 570.0027
GLY 580.0031
SER 590.0038
ALA 600.0031
LYS 610.0027
LEU 620.0023
ARG 630.0035
TRP 640.0035
PHE 650.0024
VAL 660.0034
GLU 670.0066
ARG 680.0069
ASN 690.0048
LEU 700.0046
VAL 710.0023
THR 720.0029
PRO 730.0042
GLU 740.0058
GLY 750.0078
LYS 760.0045
VAL 770.0039
VAL 780.0028
ASP 790.0026
LEU 800.0016
GLY 810.0026
CYS 820.0017
GLY 830.0031
ARG 840.0035
GLY 850.0022
GLY 860.0019
TRP 870.0018
SER 880.0021
TYR 890.0022
TYR 900.0019
CYS 910.0037
GLY 920.0038
GLY 930.0060
LEU 940.0064
LYS 950.0079
ASN 960.0084
VAL 970.0069
LYS 980.0061
GLU 990.0047
VAL 1000.0043
LYS 1010.0019
GLY 1020.0018
LEU 1030.0009
THR 1040.0014
LYS 1050.0022
GLY 1060.0033
GLY 1070.0028
PRO 1080.0038
GLY 1090.0062
HIS 1100.0058
GLU 1110.0044
GLU 1120.0045
PRO 1130.0042
ILE 1140.0043
PRO 1150.0043
MET 1160.0039
SER 1170.0034
THR 1180.0028
TYR 1190.0025
GLY 1200.0029
TRP 1210.0040
ASN 1220.0039
LEU 1230.0039
VAL 1240.0041
ARG 1250.0041
LEU 1260.0023
GLN 1270.0024
SER 1280.0033
GLY 1290.0042
VAL 1300.0036
ASP 1310.0061
VAL 1320.0035
PHE 1330.0039
PHE 1340.0066
THR 1350.0056
PRO 1360.0063
PRO 1370.0040
GLU 1380.0014
LYS 1390.0036
CYS 1400.0045
ASP 1410.0042
THR 1420.0036
LEU 1430.0027
LEU 1440.0027
CYS 1450.0022
ASP 1460.0008
ILE 1470.0008
GLY 1480.0010
GLU 1490.0015
SER 1500.0018
SER 1510.0028
PRO 1520.0031
ASN 1530.0026
PRO 1540.0023
THR 1550.0020
VAL 1560.0014
GLU 1570.0011
ALA 1580.0012
GLY 1590.0010
ARG 1600.0010
THR 1610.0016
LEU 1620.0022
ARG 1630.0026
VAL 1640.0023
LEU 1650.0024
ASN 1660.0025
LEU 1670.0024
VAL 1680.0023
GLU 1690.0025
ASN 1700.0028
TRP 1710.0017
LEU 1720.0020
ASN 1730.0021
ASN 1740.0025
ASN 1750.0028
THR 1760.0036
GLN 1770.0032
PHE 1780.0026
CYS 1790.0022
ILE 1800.0020
LYS 1810.0006
VAL 1820.0005
LEU 1830.0005
ASN 1840.0004
PRO 1850.0004
TYR 1860.0008
MET 1870.0007
PRO 1880.0013
SER 1890.0010
VAL 1900.0009
ILE 1910.0036
GLU 1920.0048
LYS 1930.0044
MET 1940.0028
GLU 1950.0032
ALA 1960.0037
LEU 1970.0035
GLN 1980.0024
ARG 1990.0029
LYS 2000.0042
TYR 2010.0037
GLY 2020.0032
GLY 2030.0027
ALA 2040.0019
LEU 2050.0012
VAL 2060.0014
ARG 2070.0012
ASN 2080.0018
PRO 2090.0027
LEU 2100.0030
SER 2110.0023
ARG 2120.0020
ASN 2130.0014
SER 2140.0016
THR 2150.0017
HIS 2160.0008
GLU 2170.0004
MET 2180.0006
TYR 2190.0010
TRP 2200.0015
VAL 2210.0025
SER 2220.0044
ASN 2230.0055
ALA 2240.0058
SER 2250.0077
GLY 2260.0033
ASN 2270.0041
ILE 2280.0033
VAL 2290.0054
SER 2300.0057
SER 2310.0026
VAL 2320.0020
ASN 2330.0020
MET 2340.0019
ILE 2350.0013
SER 2360.0009
ARG 2370.0009
MET 2380.0014
LEU 2390.0008
ILE 2400.0008
ASN 2410.0007
ARG 2420.0006
PHE 2430.0003
THR 2440.0008
MET 2450.0010
ARG 2460.0057
HIS 2470.0029
LYS 2480.0042
LYS 2490.0076
ALA 2500.0066
THR 2510.0047
TYR 2520.0032
GLU 2530.0033
PRO 2540.0034
ASP 2550.0040
VAL 2560.0057
ASP 2570.0052
LEU 2580.0033
GLY 2590.0029
SER 2600.0024
GLY 2610.0041
THR 2620.0042
ARG 2630.0042
ASN 2640.0043
ILE 2650.0042
GLY 2660.0062
ILE 2670.0042
GLU 2680.0049
SER 2690.0055
GLU 2700.0056
THR 2710.0046
PRO 2720.0026
ASN 2730.0031
LEU 2740.0046
ASP 2750.0068
ILE 2760.0058
ILE 2770.0063
GLY 2780.0077
LYS 2790.0069
ARG 2800.0062
ILE 2810.0085
GLU 2820.0091
LYS 2830.0083
ILE 2840.0074
LYS 2850.0081
GLN 2860.0103
GLU 2870.0100
HIS 2880.0063
GLU 2890.0064
THR 2900.0071
SER 2910.0016
TRP 2920.0025
HIS 2930.0024
TYR 2940.0031
ASP 2950.0032
GLN 2960.0045
ASP 2970.0046
HIS 2980.0041
PRO 2990.0039
TYR 3000.0034
LYS 3010.0031
THR 3020.0036
TRP 3030.0030
ALA 3040.0031
TYR 3050.0035
HIS 3060.0044
GLY 3070.0031
SER 3080.0030
TYR 3090.0030
GLU 3100.0036
THR 3110.0176
LYS 3120.0212
GLN 3130.0135
THR 3140.0128
GLY 3150.0080
SER 3160.0034
ALA 3170.0044
SER 3180.0033
SER 3190.0018
MET 3200.0007
VAL 3210.0038
ASN 3220.0054
GLY 3230.0055
VAL 3240.0072
VAL 3250.0070
ARG 3260.0057
LEU 3270.0085
LEU 3280.0075
THR 3290.0041
LYS 3300.0059
PRO 3310.0078
TRP 3320.0050
ASP 3330.0075
VAL 3340.0114
ILE 3350.0100
PRO 3360.0089
MET 3370.0106
VAL 3380.0078
THR 3390.0056
GLN 3400.0069
MET 3410.0067
ALA 3420.0058
MET 3430.0046
THR 3440.0050
ASP 3450.0055
THR 3460.0034
THR 3470.0024
PRO 3480.0022
PHE 3490.0017
GLY 3500.0025
GLN 3510.0022
GLN 3520.0036
ARG 3530.0044
VAL 3540.0043
PHE 3550.0051
LYS 3560.0080
GLU 3570.0098
LYS 3580.0100
VAL 3590.0082
ASP 3600.0067
THR 3610.0090
ARG 3620.0091
THR 3630.0147
GLN 3640.0191
GLU 3650.0230
PRO 3660.0296
LYS 3670.0261
GLU 3680.0215
GLY 3690.0200
THR 3700.0241
LYS 3710.0202
LYS 3720.0170
LEU 3730.0230
MET 3740.0265
LYS 3750.0225
ILE 3760.0288
THR 3770.0297
ALA 3780.0267
GLU 3790.0256
TRP 3800.0279
LEU 3810.0201
TRP 3820.0156
LYS 3830.0188
GLU 3840.0159
LEU 3850.0095
GLY 3860.0149
LYS 3870.0234
LYS 3880.0229
LYS 3890.0159
THR 3900.0151
PRO 3910.0079
ARG 3920.0077
MET 3930.0076
CYS 3940.0077
THR 3950.0081
ARG 3960.0026
GLU 3970.0046
GLU 3980.0042
PHE 3990.0020
THR 4000.0022
ARG 4010.0066
LYS 4020.0082
VAL 4030.0096
ARG 4040.0106
SER 4050.0115
ASN 4060.0125
ALA 4070.0117
ALA 4080.0102
LEU 4090.0066
GLY 4100.0052
ALA 4110.0030
ILE 4120.0021
PHE 4130.0023
THR 4140.0032
ASP 4150.0043
GLU 4160.0130
ASN 4170.0155
LYS 4180.0108
TRP 4190.0080
LYS 4200.0079
SER 4210.0060
ALA 4220.0088
ARG 4230.0113
GLU 4240.0101
ALA 4250.0091
VAL 4260.0094
GLU 4270.0109
ASP 4280.0104
SER 4290.0123
GLY 4300.0097
PHE 4310.0099
TRP 4320.0104
GLU 4330.0128
LEU 4340.0121
VAL 4350.0102
ASP 4360.0121
LYS 4370.0122
GLU 4380.0083
ARG 4390.0063
ASN 4400.0074
LEU 4410.0056
HIS 4420.0014
LEU 4430.0050
GLU 4440.0010
GLY 4450.0061
LYS 4460.0057
CYS 4470.0056
GLU 4480.0078
THR 4490.0063
CYS 4500.0039
VAL 4510.0032
TYR 4520.0028
ASN 4530.0021
MET 4540.0028
MET 4550.0022
GLY 4560.0031
LYS 4570.0017
ARG 4580.0018
GLU 4590.0031
LYS 4600.0045
LYS 4610.0080
LEU 4620.0100
GLY 4630.0102
ALA 4680.0097
LYS 4690.0074
GLY 4700.0063
SER 4710.0041
ARG 4720.0028
ALA 4730.0035
ILE 4740.0031
TRP 4750.0032
TYR 4760.0027
MET 4770.0027
TRP 4780.0066
LEU 4790.0044
GLY 4800.0052
ALA 4810.0054
ARG 4820.0036
PHE 4830.0031
LEU 4840.0031
GLU 4850.0046
PHE 4860.0046
GLU 4870.0046
ALA 4880.0075
LEU 4890.0079
GLY 4900.0091
PHE 4910.0077
LEU 4920.0080
ASN 4930.0133
GLU 4940.0150
ASP 4950.0126
HIS 4960.0123
TRP 4970.0067
PHE 4980.0051
SER 4990.0092
ARG 5000.0088
GLU 5010.0083
ASN 5020.0053
SER 5030.0025
LEU 5040.0057
SER 5050.0082
GLY 5060.0059
VAL 5070.0077
GLU 5080.0078
GLY 5090.0054
GLU 5100.0044
GLY 5110.0037
LEU 5120.0049
HIS 5130.0068
LYS 5140.0060
LEU 5150.0034
GLY 5160.0047
TYR 5170.0066
ILE 5180.0076
LEU 5190.0097
ARG 5200.0138
ASP 5210.0166
VAL 5220.0178
SER 5230.0266
LYS 5240.0301
LYS 5250.0333
GLU 5260.0427
GLY 5270.0443
GLY 5280.0290
ALA 5290.0245
MET 5300.0232
TYR 5310.0262
ALA 5320.0256
ASP 5330.0272
ASP 5340.0293
THR 5350.0263
ALA 5360.0255
GLY 5370.0296
TRP 5380.0125
ASP 5390.0099
THR 5400.0096
ARG 5410.0115
ILE 5420.0104
THR 5430.0129
LEU 5440.0115
GLU 5450.0147
ASP 5460.0132
LEU 5470.0086
LYS 5480.0102
ASN 5490.0096
GLU 5500.0074
GLU 5510.0061
MET 5520.0058
VAL 5530.0091
THR 5540.0107
ASN 5550.0106
HIS 5560.0051
MET 5570.0059
GLU 5580.0229
GLY 5590.0248
GLU 5600.0210
HIS 5610.0164
LYS 5620.0169
LYS 5630.0142
LEU 5640.0117
ALA 5650.0111
GLU 5660.0116
ALA 5670.0084
ILE 5680.0053
PHE 5690.0061
LYS 5700.0065
LEU 5710.0043
THR 5720.0026
TYR 5730.0034
GLN 5740.0043
ASN 5750.0033
LYS 5760.0026
VAL 5770.0032
VAL 5780.0053
ARG 5790.0036
VAL 5800.0040
GLN 5810.0035
ARG 5820.0033
PRO 5830.0044
THR 5840.0038
PRO 5850.0047
ARG 5860.0058
GLY 5870.0065
THR 5880.0062
VAL 5890.0044
MET 5900.0050
ASP 5910.0044
ILE 5920.0058
ILE 5930.0038
SER 5940.0027
ARG 5950.0027
ARG 5960.0044
ASP 5970.0055
GLN 5980.0058
ARG 5990.0044
GLY 6000.0034
SER 6010.0035
GLY 6020.0045
GLN 6030.0054
VAL 6040.0053
VAL 6050.0052
THR 6060.0054
TYR 6070.0056
GLY 6080.0026
LEU 6090.0044
ASN 6100.0059
THR 6110.0024
PHE 6120.0032
THR 6130.0084
ASN 6140.0074
MET 6150.0064
GLU 6160.0093
ALA 6170.0104
GLN 6180.0161
LEU 6190.0140
ILE 6200.0128
ARG 6210.0135
GLN 6220.0118
MET 6230.0166
GLU 6240.0164
GLY 6250.0169
GLU 6260.0106
GLY 6270.0097
VAL 6280.0181
PHE 6290.0101
LYS 6300.0091
SER 6310.0144
ILE 6320.0186
GLN 6330.0275
GLN 6340.0121
LEU 6350.0074
THR 6360.0150
ALA 6370.0297
THR 6380.0330
GLU 6390.0224
GLU 6400.0353
ILE 6410.0476
ALA 6420.0401
VAL 6430.0370
LYS 6440.0415
ASN 6450.0359
TRP 6460.0320
LEU 6470.0384
VAL 6480.0316
ARG 6490.0284
VAL 6500.0275
GLY 6510.0291
ARG 6520.0214
GLU 6530.0152
ARG 6540.0204
LEU 6550.0196
SER 6560.0172
ARG 6570.0235
MET 6580.0113
ALA 6590.0094
ILE 6600.0087
SER 6610.0080
GLY 6620.0080
ASP 6630.0188
ASP 6640.0164
CYS 6650.0164
VAL 6660.0152
VAL 6670.0168
LYS 6680.0265
PRO 6690.0262
LEU 6700.0263
ASP 6710.0280
ASP 6720.0295
ARG 6730.0179
PHE 6740.0179
ALA 6750.0181
SER 6760.0182
ALA 6770.0181
LEU 6780.0142
THR 6790.0149
ALA 6800.0190
LEU 6810.0188
ASN 6820.0171
ASP 6830.0166
MET 6840.0210
GLY 6850.0168
LYS 6860.0200
VAL 6870.0153
ARG 6880.0375
LYS 6890.0465
ASP 6900.0442
ILE 6910.0375
GLN 6920.0503
GLN 6930.0361
TRP 6940.0327
GLU 6950.0339
PRO 6960.0284
SER 6970.0241
ARG 6980.0234
GLY 6990.0230
TRP 7000.0199
TRP 7000.0199
ASN 7010.0217
ASP 7020.0213
TRP 7030.0122
THR 7040.0100
GLN 7050.0125
VAL 7060.0148
PRO 7070.0174
PHE 7080.0099
CYS 7090.0107
SER 7100.0128
HIS 7110.0093
HIS 7120.0066
PHE 7130.0054
HIS 7140.0061
GLU 7150.0064
LEU 7160.0079
ILE 7170.0093
MET 7180.0096
LYS 7190.0103
ASP 7200.0124
GLY 7210.0145
ARG 7220.0117
VAL 7230.0084
LEU 7240.0078
VAL 7250.0070
VAL 7260.0079
PRO 7270.0079
CYS 7280.0065
ARG 7290.0060
ASN 7300.0049
GLN 7310.0076
ASP 7320.0076
GLU 7330.0065
LEU 7340.0068
ILE 7350.0058
GLY 7360.0053
ARG 7370.0061
ALA 7380.0040
ARG 7390.0032
ILE 7400.0026
SER 7410.0024
GLN 7420.0023
GLY 7430.0032
ALA 7440.0043
GLY 7450.0075
TRP 7460.0083
SER 7470.0112
LEU 7480.0088
ARG 7490.0100
GLU 7500.0112
THR 7510.0102
ALA 7520.0095
CYS 7530.0059
LEU 7540.0057
GLY 7550.0060
LYS 7560.0060
SER 7570.0057
TYR 7580.0009
ALA 7590.0009
GLN 7600.0011
MET 7610.0012
TRP 7620.0011
SER 7630.0061
LEU 7640.0060
MET 7650.0062
TYR 7660.0063
PHE 7670.0062
HIS 7680.0111
ARG 7690.0101
ARG 7700.0113
ASP 7710.0104
LEU 7720.0104
ARG 7730.0067
LEU 7740.0044
ALA 7750.0063
ALA 7760.0081
ASN 7770.0064
ALA 7780.0076
ILE 7790.0074
CYS 7800.0073
SER 7810.0072
ALA 7820.0070
VAL 7830.0065
PRO 7840.0053
SER 7850.0065
HIS 7860.0099
TRP 7870.0123
VAL 7880.0070
PRO 7890.0071
THR 7900.0067
SER 7910.0065
ARG 7920.0062
THR 7930.0050
THR 7940.0048
TRP 7950.0046
SER 7960.0037
ILE 7970.0027
HIS 7980.0031
ALA 7990.0026
THR 8000.0037
HIS 8010.0029
GLU 8020.0043
TRP 8030.0021
MET 8040.0021
THR 8050.0017
THR 8060.0015
GLU 8070.0015
ASP 8080.0052
MET 8090.0047
LEU 8100.0048
THR 8110.0055
VAL 8120.0056
TRP 8130.0055
ASN 8140.0036
ARG 8150.0062
VAL 8160.0077
TRP 8170.0060
ILE 8180.0036
GLN 8190.0057
GLU 8200.0106
ASN 8210.0108
PRO 8220.0133
TRP 8230.0121
MET 8240.0073
GLU 8250.0088
ASP 8260.0069
LYS 8270.0026
THR 8280.0136
PRO 8290.0101
VAL 8300.0074
GLU 8310.0166
SER 8320.0092
TRP 8330.0028
GLU 8340.0041
GLU 8350.0055
ILE 8360.0042
PRO 8370.0081
TYR 8380.0129
LEU 8390.0109
GLY 8400.0119
LYS 8410.0136
ARG 8420.0134
GLU 8430.0090
ASP 8440.0098
GLN 8450.0109
TRP 8460.0079
CYS 8470.0050
GLY 8480.0074
SER 8490.0108
LEU 8500.0081
ILE 8510.0146
GLY 8520.0170
LEU 8530.0145
THR 8540.0139
SER 8550.0098
ARG 8560.0038
ALA 8570.0058
THR 8580.0067
TRP 8590.0035
ALA 8600.0029
LYS 8610.0056
ASN 8620.0096
ILE 8630.0094
GLN 8640.0100
THR 8650.0111
ALA 8660.0111
ILE 8670.0107
ASN 8680.0100
GLN 8690.0099
VAL 8700.0088
ARG 8710.0052
SER 8720.0040
LEU 8730.0051
ILE 8740.0098
GLY 8750.0136
ASN 8760.0186
GLU 8770.0151
GLU 8780.0051
TYR 8790.0041
THR 8800.0068
ASP 8810.0115
TYR 8820.0141
MET 8830.0123

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.