CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  VIRAL PROTEIN 19-APR-18 5ZQK  ***

<R2> analysis for 2605110916331659646

---  normal mode 87  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0330
GLY 60.0163
GLU 70.0208
THR 80.0149
LEU 90.0086
GLY 100.0052
GLU 110.0060
LYS 120.0043
TRP 130.0024
LYS 140.0053
ASN 150.0051
ARG 160.0104
LEU 170.0117
ASN 180.0170
ALA 190.0180
LEU 200.0180
GLY 210.0192
LYS 220.0131
SER 230.0142
GLU 240.0163
PHE 250.0095
GLN 260.0040
ILE 270.0050
TYR 280.0059
LYS 290.0052
LYS 300.0051
SER 310.0040
GLY 320.0037
ILE 330.0035
GLN 340.0036
GLU 350.0032
VAL 360.0086
ASP 370.0060
ARG 380.0062
THR 390.0067
LEU 400.0067
ALA 410.0107
LYS 420.0088
GLU 430.0085
GLY 440.0111
ILE 450.0110
LYS 460.0192
ARG 470.0146
GLY 480.0156
GLU 490.0103
THR 500.0115
ASP 510.0095
HIS 520.0100
HIS 530.0060
ALA 540.0052
VAL 550.0032
SER 560.0114
ARG 570.0099
GLY 580.0105
SER 590.0115
ALA 600.0102
LYS 610.0088
LEU 620.0105
ARG 630.0153
TRP 640.0132
PHE 650.0121
VAL 660.0194
GLU 670.0295
ARG 680.0283
ASN 690.0222
LEU 700.0159
VAL 710.0064
THR 720.0043
PRO 730.0039
GLU 740.0025
GLY 750.0048
LYS 760.0035
VAL 770.0026
VAL 780.0030
ASP 790.0026
LEU 800.0034
GLY 810.0054
CYS 820.0039
GLY 830.0070
ARG 840.0077
GLY 850.0051
GLY 860.0068
TRP 870.0050
SER 880.0043
TYR 890.0056
TYR 900.0057
CYS 910.0035
GLY 920.0077
GLY 930.0055
LEU 940.0101
LYS 950.0196
ASN 960.0090
VAL 970.0067
LYS 980.0088
GLU 990.0079
VAL 1000.0058
LYS 1010.0045
GLY 1020.0028
LEU 1030.0039
THR 1040.0075
LYS 1050.0106
GLY 1060.0132
GLY 1070.0040
PRO 1080.0066
GLY 1090.0126
HIS 1100.0165
GLU 1110.0105
GLU 1120.0101
PRO 1130.0093
ILE 1140.0102
PRO 1150.0100
MET 1160.0092
SER 1170.0091
THR 1180.0088
TYR 1190.0092
GLY 1200.0100
TRP 1210.0093
ASN 1220.0108
LEU 1230.0097
VAL 1240.0083
ARG 1250.0087
LEU 1260.0043
GLN 1270.0065
SER 1280.0094
GLY 1290.0115
VAL 1300.0082
ASP 1310.0060
VAL 1320.0045
PHE 1330.0040
PHE 1340.0055
THR 1350.0058
PRO 1360.0086
PRO 1370.0088
GLU 1380.0103
LYS 1390.0117
CYS 1400.0065
ASP 1410.0042
THR 1420.0039
LEU 1430.0033
LEU 1440.0031
CYS 1450.0027
ASP 1460.0051
ILE 1470.0033
GLY 1480.0041
GLU 1490.0062
SER 1500.0078
SER 1510.0090
PRO 1520.0065
ASN 1530.0078
PRO 1540.0046
THR 1550.0073
VAL 1560.0074
GLU 1570.0055
ALA 1580.0039
GLY 1590.0067
ARG 1600.0080
THR 1610.0035
LEU 1620.0021
ARG 1630.0023
VAL 1640.0022
LEU 1650.0020
ASN 1660.0033
LEU 1670.0031
VAL 1680.0033
GLU 1690.0038
ASN 1700.0040
TRP 1710.0039
LEU 1720.0034
ASN 1730.0028
ASN 1740.0030
ASN 1750.0027
THR 1760.0004
GLN 1770.0011
PHE 1780.0008
CYS 1790.0012
ILE 1800.0005
LYS 1810.0045
VAL 1820.0037
LEU 1830.0036
ASN 1840.0030
PRO 1850.0029
TYR 1860.0038
MET 1870.0047
PRO 1880.0067
SER 1890.0081
VAL 1900.0059
ILE 1910.0082
GLU 1920.0096
LYS 1930.0073
MET 1940.0063
GLU 1950.0088
ALA 1960.0087
LEU 1970.0064
GLN 1980.0074
ARG 1990.0089
LYS 2000.0069
TYR 2010.0038
GLY 2020.0035
GLY 2030.0036
ALA 2040.0037
LEU 2050.0039
VAL 2060.0073
ARG 2070.0065
ASN 2080.0043
PRO 2090.0057
LEU 2100.0032
SER 2110.0037
ARG 2120.0035
ASN 2130.0039
SER 2140.0051
THR 2150.0059
HIS 2160.0050
GLU 2170.0039
MET 2180.0034
TYR 2190.0023
TRP 2200.0021
VAL 2210.0059
SER 2220.0067
ASN 2230.0108
ALA 2240.0131
SER 2250.0162
GLY 2260.0122
ASN 2270.0126
ILE 2280.0099
VAL 2290.0110
SER 2300.0122
SER 2310.0063
VAL 2320.0054
ASN 2330.0056
MET 2340.0051
ILE 2350.0059
SER 2360.0045
ARG 2370.0045
MET 2380.0041
LEU 2390.0027
ILE 2400.0024
ASN 2410.0060
ARG 2420.0041
PHE 2430.0084
THR 2440.0120
MET 2450.0105
ARG 2460.0059
HIS 2470.0051
LYS 2480.0065
LYS 2490.0063
ALA 2500.0052
THR 2510.0027
TYR 2520.0032
GLU 2530.0062
PRO 2540.0103
ASP 2550.0111
VAL 2560.0102
ASP 2570.0065
LEU 2580.0049
GLY 2590.0100
SER 2600.0134
GLY 2610.0120
THR 2620.0136
ARG 2630.0149
ASN 2640.0159
ILE 2650.0178
GLY 2660.0261
ILE 2670.0179
GLU 2680.0104
SER 2690.0018
GLU 2700.0066
THR 2710.0170
PRO 2720.0121
ASN 2730.0103
LEU 2740.0105
ASP 2750.0119
ILE 2760.0091
ILE 2770.0096
GLY 2780.0094
LYS 2790.0070
ARG 2800.0078
ILE 2810.0132
GLU 2820.0127
LYS 2830.0136
ILE 2840.0137
LYS 2850.0127
GLN 2860.0238
GLU 2870.0266
HIS 2880.0203
GLU 2890.0211
THR 2900.0237
SER 2910.0096
TRP 2920.0069
HIS 2930.0050
TYR 2940.0065
ASP 2950.0082
GLN 2960.0138
ASP 2970.0146
HIS 2980.0109
PRO 2990.0121
TYR 3000.0088
LYS 3010.0059
THR 3020.0026
TRP 3030.0017
ALA 3040.0028
TYR 3050.0033
HIS 3060.0035
GLY 3070.0025
SER 3080.0024
TYR 3090.0029
GLU 3100.0025
THR 3110.0212
LYS 3120.0330
GLN 3130.0244
THR 3140.0260
GLY 3150.0219
SER 3160.0177
ALA 3170.0138
SER 3180.0131
SER 3190.0084
MET 3200.0078
VAL 3210.0050
ASN 3220.0076
GLY 3230.0084
VAL 3240.0113
VAL 3250.0109
ARG 3260.0138
LEU 3270.0166
LEU 3280.0148
THR 3290.0100
LYS 3300.0103
PRO 3310.0086
TRP 3320.0063
ASP 3330.0125
VAL 3340.0148
ILE 3350.0109
PRO 3360.0166
MET 3370.0147
VAL 3380.0078
THR 3390.0098
GLN 3400.0108
MET 3410.0082
ALA 3420.0077
MET 3430.0067
THR 3440.0060
ASP 3450.0059
THR 3460.0059
THR 3470.0041
PRO 3480.0021
PHE 3490.0029
GLY 3500.0023
GLN 3510.0044
GLN 3520.0049
ARG 3530.0079
VAL 3540.0096
PHE 3550.0100
LYS 3560.0097
GLU 3570.0147
LYS 3580.0150
VAL 3590.0110
ASP 3600.0073
THR 3610.0081
ARG 3620.0097
THR 3630.0119
GLN 3640.0158
GLU 3650.0165
PRO 3660.0135
LYS 3670.0096
GLU 3680.0089
GLY 3690.0145
THR 3700.0165
LYS 3710.0110
LYS 3720.0118
LEU 3730.0136
MET 3740.0120
LYS 3750.0102
ILE 3760.0100
THR 3770.0110
ALA 3780.0126
GLU 3790.0093
TRP 3800.0081
LEU 3810.0117
TRP 3820.0110
LYS 3830.0104
GLU 3840.0111
LEU 3850.0114
GLY 3860.0138
LYS 3870.0126
LYS 3880.0118
LYS 3890.0105
THR 3900.0090
PRO 3910.0127
ARG 3920.0126
MET 3930.0133
CYS 3940.0126
THR 3950.0130
ARG 3960.0097
GLU 3970.0129
GLU 3980.0137
PHE 3990.0083
THR 4000.0071
ARG 4010.0186
LYS 4020.0119
VAL 4030.0085
ARG 4040.0155
SER 4050.0129
ASN 4060.0138
ALA 4070.0072
ALA 4080.0057
LEU 4090.0068
GLY 4100.0080
ALA 4110.0020
ILE 4120.0028
PHE 4130.0042
THR 4140.0059
ASP 4150.0071
GLU 4160.0191
ASN 4170.0263
LYS 4180.0155
TRP 4190.0089
LYS 4200.0068
SER 4210.0096
ALA 4220.0130
ARG 4230.0161
GLU 4240.0128
ALA 4250.0116
VAL 4260.0092
GLU 4270.0098
ASP 4280.0099
SER 4290.0104
GLY 4300.0131
PHE 4310.0096
TRP 4320.0076
GLU 4330.0101
LEU 4340.0123
VAL 4350.0105
ASP 4360.0157
LYS 4370.0165
GLU 4380.0142
ARG 4390.0142
ASN 4400.0168
LEU 4410.0178
HIS 4420.0142
LEU 4430.0196
GLU 4440.0226
GLY 4450.0188
LYS 4460.0108
CYS 4470.0061
GLU 4480.0041
THR 4490.0047
CYS 4500.0039
VAL 4510.0038
TYR 4520.0020
ASN 4530.0043
MET 4540.0054
MET 4550.0086
GLY 4560.0102
LYS 4570.0094
ARG 4580.0076
GLU 4590.0068
LYS 4600.0077
LYS 4610.0070
LEU 4620.0094
GLY 4630.0099
ALA 4680.0092
LYS 4690.0076
GLY 4700.0063
SER 4710.0051
ARG 4720.0087
ALA 4730.0058
ILE 4740.0058
TRP 4750.0039
TYR 4760.0050
MET 4770.0043
TRP 4780.0051
LEU 4790.0023
GLY 4800.0015
ALA 4810.0037
ARG 4820.0042
PHE 4830.0067
LEU 4840.0065
GLU 4850.0081
PHE 4860.0090
GLU 4870.0086
ALA 4880.0139
LEU 4890.0132
GLY 4900.0138
PHE 4910.0109
LEU 4920.0116
ASN 4930.0155
GLU 4940.0119
ASP 4950.0091
HIS 4960.0126
TRP 4970.0140
PHE 4980.0168
SER 4990.0169
ARG 5000.0179
GLU 5010.0167
ASN 5020.0159
SER 5030.0201
LEU 5040.0182
SER 5050.0170
GLY 5060.0164
VAL 5070.0134
GLU 5080.0115
GLY 5090.0085
GLU 5100.0052
GLY 5110.0018
LEU 5120.0021
HIS 5130.0089
LYS 5140.0063
LEU 5150.0032
GLY 5160.0057
TYR 5170.0039
ILE 5180.0082
LEU 5190.0093
ARG 5200.0043
ASP 5210.0061
VAL 5220.0096
SER 5230.0105
LYS 5240.0106
LYS 5250.0146
GLU 5260.0140
GLY 5270.0082
GLY 5280.0166
ALA 5290.0184
MET 5300.0208
TYR 5310.0217
ALA 5320.0245
ASP 5330.0148
ASP 5340.0157
THR 5350.0160
ALA 5360.0155
GLY 5370.0173
TRP 5380.0104
ASP 5390.0092
THR 5400.0101
ARG 5410.0107
ILE 5420.0095
THR 5430.0087
LEU 5440.0067
GLU 5450.0056
ASP 5460.0059
LEU 5470.0042
LYS 5480.0017
ASN 5490.0025
GLU 5500.0038
GLU 5510.0038
MET 5520.0051
VAL 5530.0066
THR 5540.0090
ASN 5550.0071
HIS 5560.0055
MET 5570.0087
GLU 5580.0150
GLY 5590.0160
GLU 5600.0165
HIS 5610.0145
LYS 5620.0153
LYS 5630.0133
LEU 5640.0130
ALA 5650.0107
GLU 5660.0104
ALA 5670.0112
ILE 5680.0049
PHE 5690.0043
LYS 5700.0039
LEU 5710.0036
THR 5720.0051
TYR 5730.0044
GLN 5740.0050
ASN 5750.0048
LYS 5760.0049
VAL 5770.0046
VAL 5780.0030
ARG 5790.0018
VAL 5800.0032
GLN 5810.0034
ARG 5820.0042
PRO 5830.0036
THR 5840.0048
PRO 5850.0070
ARG 5860.0085
GLY 5870.0075
THR 5880.0048
VAL 5890.0039
MET 5900.0037
ASP 5910.0037
ILE 5920.0044
ILE 5930.0018
SER 5940.0042
ARG 5950.0069
ARG 5960.0105
ASP 5970.0121
GLN 5980.0082
ARG 5990.0061
GLY 6000.0040
SER 6010.0023
GLY 6020.0041
GLN 6030.0070
VAL 6040.0050
VAL 6050.0049
THR 6060.0064
TYR 6070.0056
GLY 6080.0049
LEU 6090.0059
ASN 6100.0064
THR 6110.0057
PHE 6120.0061
THR 6130.0028
ASN 6140.0020
MET 6150.0039
GLU 6160.0028
ALA 6170.0022
GLN 6180.0026
LEU 6190.0026
ILE 6200.0047
ARG 6210.0043
GLN 6220.0025
MET 6230.0072
GLU 6240.0086
GLY 6250.0042
GLU 6260.0045
GLY 6270.0094
VAL 6280.0178
PHE 6290.0158
LYS 6300.0193
SER 6310.0175
ILE 6320.0141
GLN 6330.0178
GLN 6340.0195
LEU 6350.0233
THR 6360.0259
ALA 6370.0290
THR 6380.0249
GLU 6390.0251
GLU 6400.0260
ILE 6410.0242
ALA 6420.0231
VAL 6430.0165
LYS 6440.0171
ASN 6450.0114
TRP 6460.0116
LEU 6470.0170
VAL 6480.0139
ARG 6490.0143
VAL 6500.0179
GLY 6510.0197
ARG 6520.0231
GLU 6530.0180
ARG 6540.0159
LEU 6550.0185
SER 6560.0191
ARG 6570.0160
MET 6580.0132
ALA 6590.0123
ILE 6600.0117
SER 6610.0109
GLY 6620.0109
ASP 6630.0106
ASP 6640.0113
CYS 6650.0126
VAL 6660.0146
VAL 6670.0154
LYS 6680.0155
PRO 6690.0147
LEU 6700.0123
ASP 6710.0104
ASP 6720.0126
ARG 6730.0101
PHE 6740.0091
ALA 6750.0063
SER 6760.0061
ALA 6770.0083
LEU 6780.0115
THR 6790.0140
ALA 6800.0165
LEU 6810.0171
ASN 6820.0184
ASP 6830.0167
MET 6840.0151
GLY 6850.0151
LYS 6860.0168
VAL 6870.0190
ARG 6880.0239
LYS 6890.0224
ASP 6900.0106
ILE 6910.0111
GLN 6920.0251
GLN 6930.0244
TRP 6940.0194
GLU 6950.0159
PRO 6960.0071
SER 6970.0037
ARG 6980.0159
GLY 6990.0207
TRP 7000.0254
TRP 7000.0254
ASN 7010.0272
ASP 7020.0328
TRP 7030.0190
THR 7040.0171
GLN 7050.0217
VAL 7060.0225
PRO 7070.0231
PHE 7080.0108
CYS 7090.0105
SER 7100.0118
HIS 7110.0105
HIS 7120.0100
PHE 7130.0056
HIS 7140.0062
GLU 7150.0061
LEU 7160.0079
ILE 7170.0096
MET 7180.0134
LYS 7190.0102
ASP 7200.0029
GLY 7210.0104
ARG 7220.0139
VAL 7230.0103
LEU 7240.0093
VAL 7250.0071
VAL 7260.0072
PRO 7270.0063
CYS 7280.0055
ARG 7290.0044
ASN 7300.0032
GLN 7310.0040
ASP 7320.0049
GLU 7330.0070
LEU 7340.0073
ILE 7350.0066
GLY 7360.0067
ARG 7370.0080
ALA 7380.0088
ARG 7390.0061
ILE 7400.0061
SER 7410.0070
GLN 7420.0086
GLY 7430.0125
ALA 7440.0079
GLY 7450.0073
TRP 7460.0088
SER 7470.0120
LEU 7480.0055
ARG 7490.0027
GLU 7500.0038
THR 7510.0055
ALA 7520.0042
CYS 7530.0037
LEU 7540.0035
GLY 7550.0044
LYS 7560.0046
SER 7570.0040
TYR 7580.0057
ALA 7590.0068
GLN 7600.0070
MET 7610.0064
TRP 7620.0068
SER 7630.0094
LEU 7640.0095
MET 7650.0089
TYR 7660.0087
PHE 7670.0090
HIS 7680.0048
ARG 7690.0043
ARG 7700.0042
ASP 7710.0044
LEU 7720.0050
ARG 7730.0119
LEU 7740.0090
ALA 7750.0089
ALA 7760.0108
ASN 7770.0092
ALA 7780.0110
ILE 7790.0109
CYS 7800.0108
SER 7810.0108
ALA 7820.0108
VAL 7830.0054
PRO 7840.0052
SER 7850.0041
HIS 7860.0072
TRP 7870.0067
VAL 7880.0075
PRO 7890.0071
THR 7900.0064
SER 7910.0059
ARG 7920.0058
THR 7930.0079
THR 7940.0068
TRP 7950.0048
SER 7960.0057
ILE 7970.0046
HIS 7980.0007
ALA 7990.0055
THR 8000.0080
HIS 8010.0124
GLU 8020.0148
TRP 8030.0106
MET 8040.0100
THR 8050.0112
THR 8060.0127
GLU 8070.0135
ASP 8080.0119
MET 8090.0138
LEU 8100.0115
THR 8110.0104
VAL 8120.0130
TRP 8130.0123
ASN 8140.0093
ARG 8150.0117
VAL 8160.0140
TRP 8170.0116
ILE 8180.0108
GLN 8190.0120
GLU 8200.0149
ASN 8210.0143
PRO 8220.0154
TRP 8230.0140
MET 8240.0130
GLU 8250.0166
ASP 8260.0156
LYS 8270.0113
THR 8280.0133
PRO 8290.0118
VAL 8300.0134
GLU 8310.0257
SER 8320.0286
TRP 8330.0205
GLU 8340.0297
GLU 8350.0209
ILE 8360.0161
PRO 8370.0243
TYR 8380.0089
LEU 8390.0094
GLY 8400.0094
LYS 8410.0090
ARG 8420.0130
GLU 8430.0118
ASP 8440.0068
GLN 8450.0082
TRP 8460.0124
CYS 8470.0098
GLY 8480.0029
SER 8490.0036
LEU 8500.0046
ILE 8510.0045
GLY 8520.0044
LEU 8530.0132
THR 8540.0156
SER 8550.0117
ARG 8560.0093
ALA 8570.0140
THR 8580.0157
TRP 8590.0113
ALA 8600.0082
LYS 8610.0144
ASN 8620.0173
ILE 8630.0111
GLN 8640.0078
THR 8650.0139
ALA 8660.0177
ILE 8670.0144
ASN 8680.0127
GLN 8690.0189
VAL 8700.0162
ARG 8710.0090
SER 8720.0138
LEU 8730.0138
ILE 8740.0061
GLY 8750.0186
ASN 8760.0269
GLU 8770.0217
GLU 8780.0091
TYR 8790.0094
THR 8800.0105
ASP 8810.0110
TYR 8820.0135
MET 8830.0138

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.