Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* rhamnosidase_6gsz *

<R²> analysis for 2606171002082554050

--- normal mode 88 ---

This page gives a visualization of the normalized mean square displacement <R²> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

X Y Z residue <R²> <R²>_max = 0.0656
MET 1 0.0084
ALA 2 0.0078
LEU 3 0.0054
SER 4 0.0061
ILE 5 0.0077
SER 6 0.0107
GLN 7 0.0048
VAL 8 0.0039
ALA 9 0.0070
PHE 10 0.0135
GLU 11 0.0146
HIS 12 0.0207
HIS 13 0.0248
ARG 14 0.0303
THR 15 0.0315
ALA 16 0.0173
LEU 17 0.0150
GLY 18 0.0115
ILE 19 0.0118
GLY 20 0.0098
GLU 21 0.0101
THR 22 0.0060
GLN 23 0.0050
PRO 24 0.0073
ARG 25 0.0069
VAL 26 0.0044
SER 27 0.0020
TRP 28 0.0022
ARG 29 0.0057
PHE 30 0.0081
ASP 31 0.0104
GLY 32 0.0052
ASN 33 0.0134
VAL 34 0.0141
SER 35 0.0213
ASP 36 0.0026
TRP 37 0.0013
GLU 38 0.0018
GLN 39 0.0036
ARG 40 0.0043
ALA 41 0.0033
TYR 42 0.0029
GLU 43 0.0027
ILE 44 0.0022
GLU 45 0.0034
VAL 46 0.0033
LYS 47 0.0066
ARG 48 0.0093
ALA 49 0.0150
GLY 50 0.0153
HIS 51 0.0131
ASP 52 0.0118
ALA 53 0.0085
ASP 54 0.0041
VAL 55 0.0016
PHE 56 0.0025
ARG 57 0.0026
SER 58 0.0029
GLU 59 0.0030
SER 60 0.0040
SER 61 0.0073
ASP 62 0.0047
SER 63 0.0020
VAL 64 0.0027
LEU 65 0.0044
VAL 66 0.0039
PRO 67 0.0037
TRP 68 0.0024
PRO 69 0.0048
SER 70 0.0061
SER 71 0.0075
PRO 72 0.0035
LEU 73 0.0045
GLN 74 0.0050
SER 75 0.0074
GLY 76 0.0151
GLU 77 0.0099
GLU 78 0.0104
ALA 79 0.0046
THR 80 0.0041
VAL 81 0.0059
ARG 82 0.0047
VAL 83 0.0031
ARG 84 0.0051
SER 85 0.0058
PHE 86 0.0053
GLY 87 0.0056
SER 88 0.0067
ASP 89 0.0133
GLY 90 0.0162
GLN 91 0.0135
HIS 92 0.0174
ASP 93 0.0126
THR 94 0.0142
PRO 95 0.0177
TRP 96 0.0097
SER 97 0.0061
ASP 98 0.0053
ALA 99 0.0071
VAL 100 0.0082
THR 101 0.0146
VAL 102 0.0126
GLU 103 0.0121
PRO 104 0.0106
GLY 105 0.0119
LEU 106 0.0049
LEU 107 0.0077
THR 108 0.0125
PRO 109 0.0189
ASP 110 0.0193
ASP 111 0.0067
TRP 112 0.0041
HIS 113 0.0043
ASP 114 0.0065
ALA 115 0.0061
VAL 116 0.0077
VAL 117 0.0060
ILE 118 0.0028
ALA 119 0.0035
SER 120 0.0070
ASP 121 0.0086
ARG 122 0.0077
PRO 123 0.0073
THR 124 0.0172
GLU 125 0.0254
VAL 126 0.0188
ASP 127 0.0229
ALA 128 0.0097
THR 129 0.0085
HIS 130 0.0206
ARG 131 0.0102
PRO 132 0.0082
ILE 133 0.0068
GLN 134 0.0070
PHE 135 0.0084
ARG 136 0.0099
LYS 137 0.0087
GLU 138 0.0068
PHE 139 0.0086
SER 140 0.0083
VAL 141 0.0048
ASP 142 0.0044
ASP 143 0.0074
SER 144 0.0062
TYR 145 0.0063
VAL 146 0.0034
SER 147 0.0034
ALA 148 0.0038
ARG 149 0.0057
LEU 150 0.0069
TYR 151 0.0039
ILE 152 0.0047
THR 153 0.0058
ALA 154 0.0080
LEU 155 0.0097
GLY 156 0.0068
LEU 157 0.0059
TYR 158 0.0049
GLU 159 0.0059
ALA 160 0.0054
ARG 161 0.0116
ILE 162 0.0082
ASN 163 0.0071
ASP 164 0.0124
GLN 165 0.0149
ARG 166 0.0046
VAL 167 0.0040
GLY 168 0.0042
ASP 169 0.0024
HIS 170 0.0044
VAL 171 0.0097
MET 172 0.0082
ALA 173 0.0094
PRO 174 0.0097
GLY 175 0.0090
TRP 176 0.0101
GLN 177 0.0096
SER 178 0.0100
TYR 179 0.0101
GLN 180 0.0102
TYR 181 0.0116
ARG 182 0.0103
HIS 183 0.0091
GLU 184 0.0082
TYR 185 0.0069
ASN 186 0.0029
THR 187 0.0031
TYR 188 0.0032
ASP 189 0.0058
VAL 190 0.0066
THR 191 0.0072
ASP 192 0.0087
LEU 193 0.0104
LEU 194 0.0077
LYS 195 0.0088
GLN 196 0.0090
GLY 197 0.0097
PRO 198 0.0100
ASN 199 0.0089
ALA 200 0.0090
ILE 201 0.0119
GLY 202 0.0085
VAL 203 0.0047
THR 204 0.0039
VAL 205 0.0048
GLY 206 0.0129
GLU 207 0.0124
GLY 208 0.0122
TRP 209 0.0123
TYR 210 0.0129
SER 211 0.0162
GLY 212 0.0117
ARG 213 0.0101
ILE 214 0.0130
GLY 215 0.0166
TYR 216 0.0245
ASP 217 0.0268
GLY 218 0.0205
GLY 219 0.0177
LYS 220 0.0156
ARG 221 0.0117
ASN 222 0.0154
ILE 223 0.0135
TYR 224 0.0164
GLY 225 0.0199
ASP 226 0.0189
THR 227 0.0166
LEU 228 0.0139
GLY 229 0.0107
LEU 230 0.0081
LEU 231 0.0051
SER 232 0.0069
LEU 233 0.0065
LEU 234 0.0097
VAL 235 0.0090
VAL 236 0.0071
THR 237 0.0022
LYS 238 0.0063
SER 239 0.0111
ASP 240 0.0161
GLY 241 0.0119
SER 242 0.0115
LYS 243 0.0076
LEU 244 0.0114
TYR 245 0.0139
ILE 246 0.0149
PRO 247 0.0120
SER 248 0.0103
ASP 249 0.0104
SER 250 0.0111
SER 251 0.0131
TRP 252 0.0132
LYS 253 0.0131
SER 254 0.0135
SER 255 0.0134
THR 256 0.0048
GLY 257 0.0079
PRO 258 0.0096
ILE 259 0.0073
ILE 260 0.0046
SER 261 0.0033
SER 262 0.0046
GLU 263 0.0058
ILE 264 0.0070
TYR 265 0.0067
ASP 266 0.0065
GLY 267 0.0039
GLU 268 0.0026
GLU 269 0.0027
TYR 270 0.0043
ASP 271 0.0129
SER 272 0.0133
ARG 273 0.0172
LEU 274 0.0230
GLU 275 0.0237
GLN 276 0.0236
LYS 277 0.0334
GLY 278 0.0277
TRP 279 0.0138
SER 280 0.0100
GLN 281 0.0159
VAL 282 0.0163
GLY 283 0.0226
PHE 284 0.0221
ASN 285 0.0256
SER 286 0.0054
THR 287 0.0143
GLY 288 0.0134
TRP 289 0.0146
LEU 290 0.0255
GLY 291 0.0227
THR 292 0.0123
HIS 293 0.0152
GLU 294 0.0212
LEU 295 0.0264
SER 296 0.0353
PHE 297 0.0311
PRO 298 0.0303
LYS 299 0.0216
GLU 300 0.0277
ARG 301 0.0182
LEU 302 0.0164
ALA 303 0.0188
SER 304 0.0199
PRO 305 0.0204
ASP 306 0.0101
GLY 307 0.0111
PRO 308 0.0115
PRO 309 0.0103
VAL 310 0.0107
ARG 311 0.0068
ARG 312 0.0062
VAL 313 0.0072
ALA 314 0.0089
GLU 315 0.0105
HIS 316 0.0102
LYS 317 0.0027
LEU 318 0.0019
ALA 319 0.0073
ASN 320 0.0094
VAL 321 0.0165
PHE 322 0.0144
SER 323 0.0095
SER 324 0.0111
ALA 325 0.0170
SER 326 0.0128
GLY 327 0.0057
LYS 328 0.0031
THR 329 0.0053
VAL 330 0.0044
LEU 331 0.0039
ASP 332 0.0026
PHE 333 0.0017
GLY 334 0.0052
GLN 335 0.0068
ASN 336 0.0051
LEU 337 0.0052
VAL 338 0.0050
GLY 339 0.0053
TRP 340 0.0056
LEU 341 0.0049
ARG 342 0.0075
ILE 343 0.0063
ARG 344 0.0078
VAL 345 0.0095
LYS 346 0.0131
GLY 347 0.0121
PRO 348 0.0120
LYS 349 0.0096
GLY 350 0.0086
GLN 351 0.0057
THR 352 0.0057
ILE 353 0.0054
ARG 354 0.0060
PHE 355 0.0061
VAL 356 0.0041
HIS 357 0.0038
THR 358 0.0038
GLU 359 0.0036
VAL 360 0.0037
MET 361 0.0100
GLU 362 0.0105
ASN 363 0.0127
GLY 364 0.0134
GLU 365 0.0108
VAL 366 0.0050
ALA 367 0.0049
THR 368 0.0033
ARG 369 0.0040
PRO 370 0.0055
LEU 371 0.0066
ARG 372 0.0094
GLN 373 0.0106
ALA 374 0.0077
LYS 375 0.0079
ALA 376 0.0034
THR 377 0.0040
ASP 378 0.0037
HIS 379 0.0046
PHE 380 0.0043
THR 381 0.0029
LEU 382 0.0052
SER 383 0.0045
GLY 384 0.0093
GLU 385 0.0088
GLY 386 0.0159
VAL 387 0.0132
GLN 388 0.0106
GLU 389 0.0084
TRP 390 0.0054
GLU 391 0.0067
PRO 392 0.0052
SER 393 0.0059
PHE 394 0.0054
THR 395 0.0035
TYR 396 0.0027
HIS 397 0.0021
GLY 398 0.0021
PHE 399 0.0017
ARG 400 0.0017
TYR 401 0.0017
VAL 402 0.0039
GLN 403 0.0049
VAL 404 0.0072
ASP 405 0.0089
GLY 406 0.0163
TRP 407 0.0130
PRO 408 0.0114
ALA 409 0.0147
ASP 410 0.0131
THR 411 0.0103
PRO 412 0.0117
LEU 413 0.0110
ASP 414 0.0089
GLU 415 0.0045
ASN 416 0.0049
SER 417 0.0027
VAL 418 0.0018
THR 419 0.0051
ALA 420 0.0066
ILE 421 0.0080
VAL 422 0.0066
VAL 423 0.0070
HIS 424 0.0084
SER 425 0.0097
ASP 426 0.0147
MET 427 0.0117
GLU 428 0.0129
ARG 429 0.0119
THR 430 0.0121
GLY 431 0.0148
TYR 432 0.0136
PHE 433 0.0111
GLU 434 0.0095
CYS 435 0.0079
SER 436 0.0044
ASN 437 0.0050
PRO 438 0.0083
LEU 439 0.0093
ILE 440 0.0041
SER 441 0.0047
LYS 442 0.0069
LEU 443 0.0037
HIS 444 0.0058
GLU 445 0.0093
ASN 446 0.0048
ILE 447 0.0034
LEU 448 0.0055
TRP 449 0.0062
SER 450 0.0045
MET 451 0.0043
ARG 452 0.0067
GLY 453 0.0070
ASN 454 0.0053
PHE 455 0.0056
PHE 456 0.0037
SER 457 0.0039
ILE 458 0.0026
PRO 459 0.0015
THR 460 0.0020
ASP 461 0.0032
CYS 462 0.0034
PRO 463 0.0033
GLN 464 0.0040
ARG 465 0.0048
ASP 466 0.0065
GLU 467 0.0060
ARG 468 0.0053
LEU 469 0.0059
GLY 470 0.0060
TRP 471 0.0034
THR 472 0.0019
GLY 473 0.0024
ASP 474 0.0012
ILE 475 0.0025
HIS 476 0.0052
ALA 477 0.0052
PHE 478 0.0054
SER 479 0.0081
ARG 480 0.0102
THR 481 0.0079
ALA 482 0.0082
ASN 483 0.0108
PHE 484 0.0108
ILE 485 0.0097
TYR 486 0.0094
ASP 487 0.0108
THR 488 0.0077
ALA 489 0.0087
GLY 490 0.0104
PHE 491 0.0059
LEU 492 0.0054
ARG 493 0.0063
ALA 494 0.0070
TRP 495 0.0065
LEU 496 0.0036
LYS 497 0.0043
ASP 498 0.0041
ALA 499 0.0035
ARG 500 0.0039
SER 501 0.0017
GLU 502 0.0008
GLN 503 0.0019
LEU 504 0.0041
ASN 505 0.0041
HIS 506 0.0027
SER 507 0.0027
TYR 508 0.0033
SER 509 0.0038
LEU 510 0.0040
PRO 511 0.0046
TYR 512 0.0054
VAL 513 0.0025
ILE 514 0.0016
PRO 515 0.0038
ASN 516 0.0127
ILE 517 0.0132
HIS 518 0.0136
GLY 519 0.0143
ASN 520 0.0151
GLY 521 0.0147
GLU 522 0.0116
THR 523 0.0115
PRO 524 0.0110
THR 525 0.0083
SER 526 0.0067
ILE 527 0.0047
TRP 528 0.0027
GLY 529 0.0040
ASP 530 0.0018
ALA 531 0.0056
ILE 532 0.0052
VAL 533 0.0035
GLY 534 0.0047
VAL 535 0.0069
PRO 536 0.0080
TRP 537 0.0084
GLN 538 0.0097
LEU 539 0.0089
TYR 540 0.0078
GLU 541 0.0085
SER 542 0.0091
PHE 543 0.0091
GLY 544 0.0087
ASP 545 0.0095
LYS 546 0.0109
VAL 547 0.0112
MET 548 0.0111
LEU 549 0.0108
GLU 550 0.0110
GLU 551 0.0098
GLN 552 0.0089
TYR 553 0.0071
GLY 554 0.0073
GLY 555 0.0084
ALA 556 0.0052
LYS 557 0.0053
ASP 558 0.0040
TRP 559 0.0027
VAL 560 0.0033
ASP 561 0.0020
LYS 562 0.0033
GLY 563 0.0023
ILE 564 0.0052
VAL 565 0.0090
ARG 566 0.0123
ASN 567 0.0149
ASP 568 0.0214
VAL 569 0.0197
GLY 570 0.0161
LEU 571 0.0110
TRP 572 0.0105
ASP 573 0.0115
ARG 574 0.0130
SER 575 0.0132
THR 576 0.0136
PHE 577 0.0119
GLN 578 0.0113
TRP 579 0.0097
ALA 580 0.0102
ASP 581 0.0102
TRP 582 0.0072
LEU 583 0.0044
ASP 584 0.0068
PRO 585 0.0068
LYS 586 0.0150
ALA 587 0.0090
PRO 588 0.0093
ALA 589 0.0107
ASP 590 0.0114
ASP 591 0.0040
PRO 592 0.0043
GLY 593 0.0083
ASP 594 0.0089
ALA 595 0.0116
THR 596 0.0095
THR 597 0.0103
ASN 598 0.0109
LYS 599 0.0103
TYR 600 0.0119
LEU 601 0.0089
VAL 602 0.0082
SER 603 0.0080
ASP 604 0.0085
ALA 605 0.0084
TYR 606 0.0050
LEU 607 0.0056
LEU 608 0.0047
HIS 609 0.0026
SER 610 0.0018
THR 611 0.0067
ASP 612 0.0067
MET 613 0.0068
LEU 614 0.0069
ALA 615 0.0069
ASN 616 0.0099
ILE 617 0.0095
SER 618 0.0055
THR 619 0.0089
SER 620 0.0119
LEU 621 0.0129
SER 622 0.0180
LYS 623 0.0110
GLY 624 0.0177
GLU 625 0.0191
GLU 626 0.0074
ALA 627 0.0070
SER 628 0.0069
ASN 629 0.0094
TYR 630 0.0129
THR 631 0.0162
GLU 632 0.0196
TRP 633 0.0140
HIS 634 0.0086
ALA 635 0.0144
LYS 636 0.0099
LEU 637 0.0046
THR 638 0.0021
LYS 639 0.0035
GLU 640 0.0089
PHE 641 0.0063
GLN 642 0.0058
LYS 643 0.0070
ALA 644 0.0079
TRP 645 0.0071
ILE 646 0.0275
THR 647 0.0450
SER 648 0.0656
ASN 649 0.0640
GLY 650 0.0338
THR 651 0.0153
MET 652 0.0062
ALA 653 0.0059
ASN 654 0.0038
GLU 655 0.0113
THR 656 0.0066
GLN 657 0.0063
THR 658 0.0063
GLY 659 0.0061
LEU 660 0.0057
ALA 661 0.0052
LEU 662 0.0037
PRO 663 0.0052
LEU 664 0.0055
TYR 665 0.0038
PHE 666 0.0034
ASP 667 0.0057
LEU 668 0.0070
PHE 669 0.0094
PRO 670 0.0119
SER 671 0.0157
ALA 672 0.0197
GLU 673 0.0213
GLN 674 0.0155
ALA 675 0.0149
GLN 676 0.0154
SER 677 0.0109
ALA 678 0.0099
ALA 679 0.0141
LYS 680 0.0117
ARG 681 0.0091
LEU 682 0.0102
VAL 683 0.0155
ASN 684 0.0154
ILE 685 0.0135
ILE 686 0.0109
LYS 687 0.0172
GLN 688 0.0181
ASN 689 0.0100
ASP 690 0.0095
TYR 691 0.0052
LYS 692 0.0038
VAL 693 0.0032
GLY 694 0.0012
THR 695 0.0013
GLY 696 0.0037
PHE 697 0.0014
ALA 698 0.0032
GLY 699 0.0020
THR 700 0.0022
HIS 701 0.0079
LEU 702 0.0091
LEU 703 0.0085
GLY 704 0.0111
HIS 705 0.0138
THR 706 0.0101
LEU 707 0.0121
SER 708 0.0149
LYS 709 0.0137
TYR 710 0.0137
GLY 711 0.0151
GLU 712 0.0123
SER 713 0.0126
ASP 714 0.0122
ALA 715 0.0089
PHE 716 0.0096
TYR 717 0.0090
SER 718 0.0087
MET 719 0.0078
LEU 720 0.0068
ARG 721 0.0079
GLN 722 0.0074
THR 723 0.0068
GLU 724 0.0076
VAL 725 0.0065
PRO 726 0.0059
SER 727 0.0056
TRP 728 0.0046
LEU 729 0.0055
TYR 730 0.0061
GLN 731 0.0053
VAL 732 0.0073
VAL 733 0.0093
MET 734 0.0079
ASN 735 0.0087
GLY 736 0.0060
THR 737 0.0054
THR 738 0.0034
THR 739 0.0012
TRP 740 0.0030
GLU 741 0.0047
ARG 742 0.0039
TRP 743 0.0035
ASP 744 0.0032
SER 745 0.0039
MET 746 0.0072
LEU 747 0.0079
PRO 748 0.0115
ASN 749 0.0193
GLY 750 0.0177
SER 751 0.0158
ILE 752 0.0117
ASN 753 0.0075
PRO 754 0.0059
GLY 755 0.0035
GLN 756 0.0092
MET 757 0.0081
THR 758 0.0064
SER 759 0.0054
PHE 760 0.0037
ASN 761 0.0025
HIS 762 0.0015
TYR 763 0.0009
ALA 764 0.0017
VAL 765 0.0025
GLY 766 0.0038
SER 767 0.0068
VAL 768 0.0075
GLY 769 0.0090
SER 770 0.0129
TRP 771 0.0131
LEU 772 0.0105
HIS 773 0.0118
GLU 774 0.0137
VAL 775 0.0128
ILE 776 0.0088
GLY 777 0.0083
GLY 778 0.0075
LEU 779 0.0079
SER 780 0.0083
PRO 781 0.0090
ALA 782 0.0104
GLU 783 0.0120
PRO 784 0.0125
GLY 785 0.0119
TRP 786 0.0088
ARG 787 0.0078
ARG 788 0.0057
ILE 789 0.0057
ASN 790 0.0044
ILE 791 0.0139
GLU 792 0.0110
VAL 793 0.0086
VAL 794 0.0080
PRO 795 0.0091
GLY 796 0.0113
GLY 797 0.0117
ASP 798 0.0098
LEU 799 0.0088
GLN 800 0.0072
GLN 801 0.0073
ALA 802 0.0079
SER 803 0.0098
THR 804 0.0113
LYS 805 0.0139
PHE 806 0.0119
LEU 807 0.0101
THR 808 0.0082
PRO 809 0.0073
TYR 810 0.0089
GLY 811 0.0098
MET 812 0.0086
ALA 813 0.0086
SER 814 0.0089
THR 815 0.0103
LYS 816 0.0090
TRP 817 0.0051
TRP 818 0.0065
LEU 819 0.0087
ASP 820 0.0136
GLY 821 0.0395
GLN 822 0.0222
ASP 823 0.0152
GLN 824 0.0094
SER 825 0.0234
CYS 826 0.0130
GLY 827 0.0097
GLY 828 0.0084
PHE 829 0.0100
ASP 830 0.0122
PHE 831 0.0077
HIS 832 0.0044
LEU 833 0.0087
VAL 834 0.0150
ALA 835 0.0193
GLU 836 0.0147
VAL 837 0.0109
PRO 838 0.0069
PRO 839 0.0072
ASN 840 0.0045
THR 841 0.0123
ARG 842 0.0126
ALA 843 0.0153
THR 844 0.0173
VAL 845 0.0202
VAL 846 0.0255
LEU 847 0.0275
PRO 848 0.0262
GLY 849 0.0295
LYS 850 0.0310
GLY 851 0.0384
GLY 852 0.0453
GLU 853 0.0324
LYS 854 0.0396
VAL 855 0.0350
ASP 856 0.0252
VAL 857 0.0203
GLY 858 0.0201
SER 859 0.0190
GLY 860 0.0184
VAL 861 0.0241
HIS 862 0.0165
GLU 863 0.0131
TYR 864 0.0143
HIS 865 0.0176
VAL 866 0.0154
ARG 867 0.0133
CYS 868 0.0101
VAL 869 0.0105
LYS 870 0.0111
LEU 871 0.0203

If you find results from this site helpful for your research, please cite one of our papers:

K. Suhre & Y.H. Sanejouand, ElNemo: a normal mode web-server for protein movement analysis and the generation of templates for molecular replacement. Nucleic Acids Research, 32, W610-W614, 2004.
K. Suhre & Y.H. Sanejouand, On the potential of normal mode analysis for solving difficult molecular replacement problems. Acta Cryst. D vol.60, p796-799, 2004 © International Union of Crystallography.

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.

Should you encounter any unexpected behaviour, please let us know. elNémo has been relocated. **Some cleaning from time to time** Sorry for the inconvenience.

*** rhamnosidase_6gsz ***

<R2> analysis for 2606171002082554050

--- normal mode 88 ---

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
Some cleaning from time to time
Sorry for the inconvenience.

* rhamnosidase_6gsz *

<R²> analysis for 2606171002082554050