CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  rhamnosidase_6gsz_2  ***

<R2> analysis for 2606190905412989214

---  normal mode 53  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0690
ALA 20.0120
LEU 30.0093
SER 40.0065
ILE 50.0053
SER 60.0078
GLN 70.0066
VAL 80.0049
ALA 90.0047
PHE 100.0037
GLU 110.0033
HIS 120.0045
HIS 130.0047
ARG 140.0056
THR 150.0050
ALA 160.0040
LEU 170.0041
GLY 180.0036
ILE 190.0042
GLY 200.0043
GLU 210.0050
THR 220.0064
GLN 230.0046
PRO 240.0040
ARG 250.0027
VAL 260.0035
SER 270.0047
TRP 280.0057
ARG 290.0067
ARG 290.0068
PHE 300.0076
ASP 310.0088
GLY 320.0118
ASN 330.0076
VAL 340.0076
SER 350.0059
ASP 360.0059
TRP 370.0126
GLU 380.0108
GLN 390.0070
ARG 400.0066
ARG 400.0065
ALA 410.0034
TYR 420.0017
GLU 430.0017
ILE 440.0015
GLU 450.0020
VAL 460.0027
LYS 470.0034
ARG 480.0067
ALA 490.0148
GLY 500.0189
HIS 510.0142
ASP 520.0081
ALA 530.0051
ASP 540.0023
VAL 550.0029
PHE 560.0046
ARG 570.0056
SER 580.0033
SER 580.0033
GLU 590.0038
SER 600.0037
SER 610.0064
SER 610.0064
ASP 620.0056
SER 630.0065
VAL 640.0061
LEU 650.0048
VAL 660.0039
PRO 670.0018
TRP 680.0030
PRO 690.0028
SER 700.0043
SER 710.0060
PRO 720.0058
LEU 730.0055
GLN 740.0049
SER 750.0045
GLY 760.0047
GLU 770.0065
GLU 780.0060
ALA 790.0049
THR 800.0044
VAL 810.0041
ARG 820.0052
VAL 830.0029
ARG 840.0031
SER 850.0043
PHE 860.0073
GLY 870.0114
SER 880.0202
ASP 890.0388
GLY 900.0371
GLN 910.0463
HIS 920.0129
ASP 930.0102
THR 940.0064
PRO 950.0062
TRP 960.0063
SER 970.0042
ASP 980.0065
ALA 990.0058
VAL 1000.0035
THR 1010.0045
VAL 1020.0055
GLU 1030.0042
PRO 1040.0037
GLY 1050.0028
LEU 1060.0020
LEU 1070.0060
THR 1080.0096
PRO 1090.0111
ASP 1100.0119
ASP 1110.0067
TRP 1120.0039
HIS 1130.0055
ASP 1140.0061
ASP 1140.0061
ALA 1150.0047
VAL 1160.0043
VAL 1170.0039
ILE 1180.0033
ALA 1190.0025
SER 1200.0023
ASP 1210.0024
ARG 1220.0020
PRO 1230.0025
THR 1240.0026
GLU 1250.0028
VAL 1260.0041
ASP 1270.0046
ALA 1280.0032
THR 1290.0020
HIS 1300.0015
ARG 1310.0010
PRO 1320.0023
ILE 1330.0021
GLN 1340.0020
PHE 1350.0022
ARG 1360.0022
LYS 1370.0042
GLU 1380.0029
PHE 1390.0036
SER 1400.0039
VAL 1410.0036
ASP 1420.0090
ASP 1430.0088
SER 1440.0077
TYR 1450.0048
VAL 1460.0036
SER 1470.0019
ALA 1480.0027
ARG 1490.0030
LEU 1500.0040
TYR 1510.0038
ILE 1520.0039
THR 1530.0024
ALA 1540.0016
LEU 1550.0014
GLY 1560.0015
LEU 1570.0015
TYR 1580.0017
GLU 1590.0021
ALA 1600.0025
ARG 1610.0029
ILE 1620.0023
ASN 1630.0025
ASP 1640.0027
GLN 1650.0031
ARG 1660.0030
VAL 1670.0041
GLY 1680.0044
ASP 1690.0046
HIS 1700.0038
VAL 1710.0035
MET 1720.0042
ALA 1730.0035
PRO 1740.0029
GLY 1750.0037
TRP 1760.0039
GLN 1770.0049
SER 1780.0057
TYR 1790.0044
GLN 1800.0055
TYR 1810.0049
ARG 1820.0045
HIS 1830.0034
GLU 1840.0023
TYR 1850.0012
ASN 1860.0025
THR 1870.0032
TYR 1880.0030
ASP 1890.0022
VAL 1900.0026
THR 1910.0018
ASP 1920.0024
LEU 1930.0018
LEU 1940.0018
LYS 1950.0034
GLN 1960.0052
GLY 1970.0050
PRO 1980.0041
ASN 1990.0024
ALA 2000.0022
ILE 2010.0034
GLY 2020.0037
VAL 2030.0031
THR 2040.0024
VAL 2050.0019
GLY 2060.0016
GLU 2070.0018
GLY 2080.0026
TRP 2090.0032
TYR 2100.0024
SER 2110.0026
GLY 2120.0029
ARG 2130.0028
ILE 2140.0036
GLY 2150.0041
TYR 2160.0042
ASP 2170.0055
GLY 2180.0046
GLY 2190.0048
LYS 2200.0045
ARG 2210.0040
ASN 2220.0044
ILE 2230.0050
TYR 2240.0042
GLY 2250.0040
ASP 2260.0041
THR 2270.0022
LEU 2280.0014
GLY 2290.0022
LEU 2300.0030
LEU 2310.0036
SER 2320.0056
SER 2320.0056
LEU 2330.0049
LEU 2340.0043
LEU 2340.0043
VAL 2350.0037
VAL 2360.0031
THR 2370.0020
LYS 2380.0048
SER 2390.0074
ASP 2400.0090
GLY 2410.0058
SER 2420.0044
LYS 2430.0035
LEU 2440.0038
LEU 2440.0038
TYR 2450.0059
ILE 2460.0067
PRO 2470.0062
SER 2480.0046
ASP 2490.0043
SER 2500.0036
SER 2500.0036
SER 2510.0045
TRP 2520.0033
LYS 2530.0025
SER 2540.0025
SER 2550.0020
THR 2560.0023
GLY 2570.0026
PRO 2580.0028
ILE 2590.0031
ILE 2600.0029
SER 2610.0034
SER 2620.0017
GLU 2630.0009
ILE 2640.0015
ILE 2640.0015
TYR 2650.0015
ASP 2660.0009
GLY 2670.0043
GLU 2680.0045
GLU 2690.0046
TYR 2700.0046
ASP 2710.0048
SER 2720.0058
ARG 2730.0046
LEU 2740.0033
GLU 2750.0045
GLN 2760.0041
LYS 2770.0071
GLY 2780.0051
TRP 2790.0026
SER 2800.0025
GLN 2810.0022
VAL 2820.0039
GLY 2830.0061
PHE 2840.0054
ASN 2850.0064
SER 2860.0042
THR 2870.0044
GLY 2880.0040
TRP 2890.0023
LEU 2900.0025
GLY 2910.0028
THR 2920.0032
HIS 2930.0036
GLU 2940.0049
LEU 2950.0057
SER 2960.0079
PHE 2970.0075
PRO 2980.0088
LYS 2990.0072
GLU 3000.0086
ARG 3010.0074
LEU 3020.0035
ALA 3030.0020
SER 3040.0013
PRO 3050.0026
ASP 3060.0038
GLY 3070.0070
PRO 3080.0065
PRO 3090.0063
VAL 3100.0060
ARG 3110.0057
ARG 3120.0037
VAL 3130.0031
ALA 3140.0019
GLU 3150.0021
GLU 3150.0021
HIS 3160.0029
LYS 3170.0070
LEU 3180.0057
ALA 3190.0058
ASN 3200.0047
VAL 3210.0038
PHE 3220.0071
SER 3230.0073
SER 3240.0072
ALA 3250.0070
SER 3260.0078
GLY 3270.0070
LYS 3280.0069
THR 3290.0068
VAL 3300.0063
LEU 3310.0061
ASP 3320.0040
PHE 3330.0035
GLY 3340.0031
GLN 3350.0021
ASN 3360.0009
LEU 3370.0007
VAL 3380.0016
GLY 3390.0017
TRP 3400.0026
LEU 3410.0033
ARG 3420.0093
ILE 3430.0086
ARG 3440.0091
ARG 3440.0091
VAL 3450.0082
LYS 3460.0078
GLY 3470.0091
PRO 3480.0081
LYS 3490.0072
GLY 3500.0073
GLN 3510.0072
THR 3520.0047
ILE 3530.0047
ARG 3540.0051
PHE 3550.0054
VAL 3560.0057
HIS 3570.0021
THR 3580.0019
GLU 3590.0027
VAL 3600.0027
MET 3610.0030
GLU 3620.0040
ASN 3630.0052
GLY 3640.0068
GLU 3650.0061
VAL 3660.0052
ALA 3670.0051
THR 3680.0045
ARG 3690.0040
PRO 3700.0046
LEU 3710.0047
ARG 3720.0025
GLN 3730.0021
ALA 3740.0022
LYS 3750.0023
ALA 3760.0028
THR 3770.0052
ASP 3780.0052
HIS 3790.0049
PHE 3800.0049
THR 3810.0047
LEU 3820.0069
SER 3830.0069
GLY 3840.0073
GLU 3850.0079
GLU 3850.0078
GLY 3860.0096
GLY 3860.0096
VAL 3870.0078
GLN 3880.0072
GLU 3890.0083
GLU 3890.0083
TRP 3900.0078
GLU 3910.0085
PRO 3920.0026
SER 3930.0021
PHE 3940.0013
THR 3950.0012
TYR 3960.0011
HIS 3970.0008
GLY 3980.0011
PHE 3990.0011
ARG 4000.0020
TYR 4010.0025
VAL 4020.0054
GLN 4030.0053
VAL 4040.0051
ASP 4050.0047
GLY 4060.0046
TRP 4070.0075
PRO 4080.0086
ALA 4090.0115
ASP 4100.0116
THR 4110.0120
PRO 4120.0101
LEU 4130.0085
ASP 4140.0099
GLU 4150.0114
ASN 4160.0125
SER 4170.0062
VAL 4180.0062
THR 4190.0065
THR 4190.0065
ALA 4200.0065
ILE 4210.0065
VAL 4220.0025
VAL 4230.0038
HIS 4240.0053
SER 4250.0067
ASP 4260.0061
MET 4270.0068
GLU 4280.0054
ARG 4290.0029
THR 4300.0032
GLY 4310.0042
TYR 4320.0105
PHE 4330.0100
GLU 4340.0100
CYS 4350.0108
SER 4360.0122
ASN 4370.0045
PRO 4380.0048
LEU 4390.0045
ILE 4400.0049
SER 4410.0050
LYS 4420.0036
LEU 4430.0048
HIS 4440.0040
GLU 4450.0041
GLU 4450.0041
ASN 4460.0059
ILE 4470.0041
LEU 4480.0039
TRP 4490.0046
SER 4500.0052
MET 4510.0051
ARG 4520.0049
GLY 4530.0050
ASN 4540.0052
PHE 4550.0052
PHE 4560.0055
SER 4570.0058
ILE 4580.0056
PRO 4590.0055
THR 4600.0058
ASP 4610.0060
CYS 4620.0051
PRO 4630.0049
GLN 4640.0046
ARG 4650.0043
ASP 4660.0040
GLU 4670.0044
ARG 4680.0047
LEU 4690.0050
GLY 4700.0054
TRP 4710.0053
THR 4720.0031
GLY 4730.0036
ASP 4740.0042
ILE 4750.0034
HIS 4760.0027
ALA 4770.0076
PHE 4780.0065
SER 4790.0064
ARG 4800.0063
THR 4810.0053
ALA 4820.0055
ASN 4830.0034
PHE 4840.0030
ILE 4850.0030
TYR 4860.0028
ASP 4870.0041
THR 4880.0043
ALA 4890.0041
GLY 4900.0052
PHE 4910.0056
LEU 4920.0046
ARG 4930.0044
ALA 4940.0048
TRP 4950.0048
LEU 4960.0041
LYS 4970.0040
ASP 4980.0047
ALA 4990.0052
ARG 5000.0044
SER 5010.0043
GLU 5020.0057
GLN 5030.0047
LEU 5040.0047
ASN 5050.0049
HIS 5060.0045
SER 5070.0045
TYR 5080.0044
SER 5090.0042
LEU 5100.0035
PRO 5110.0042
TYR 5120.0041
VAL 5130.0046
ILE 5140.0050
PRO 5150.0057
ASN 5160.0056
ILE 5170.0072
HIS 5180.0066
GLY 5190.0070
ASN 5200.0064
GLY 5210.0060
GLU 5220.0039
THR 5230.0034
PRO 5240.0021
THR 5250.0019
SER 5260.0016
ILE 5270.0014
TRP 5280.0016
GLY 5290.0007
ASP 5300.0007
ALA 5310.0011
ILE 5320.0009
VAL 5330.0010
GLY 5340.0004
VAL 5350.0009
PRO 5360.0013
TRP 5370.0017
GLN 5380.0020
LEU 5390.0013
TYR 5400.0017
GLU 5410.0025
SER 5420.0017
PHE 5430.0023
GLY 5440.0035
ASP 5450.0039
LYS 5460.0041
VAL 5470.0045
MET 5480.0037
MET 5480.0037
LEU 5490.0029
GLU 5500.0034
GLU 5510.0035
GLN 5520.0028
TYR 5530.0028
GLY 5540.0029
GLY 5550.0027
ALA 5560.0026
LYS 5570.0046
ASP 5580.0046
TRP 5590.0041
VAL 5600.0043
ASP 5610.0050
LYS 5620.0078
GLY 5630.0071
ILE 5640.0069
VAL 5650.0075
ARG 5660.0076
ASN 5670.0216
ASP 5680.0316
VAL 5690.0226
GLY 5700.0159
LEU 5710.0046
TRP 5720.0055
ASP 5730.0069
ARG 5740.0072
SER 5750.0072
THR 5760.0047
PHE 5770.0041
GLN 5780.0034
TRP 5790.0033
ALA 5800.0031
ASP 5810.0038
TRP 5820.0082
LEU 5830.0095
ASP 5840.0093
PRO 5850.0108
LYS 5860.0147
ALA 5870.0212
PRO 5880.0291
ALA 5890.0269
ASP 5900.0338
ASP 5910.0298
PRO 5920.0162
GLY 5930.0146
ASP 5940.0165
ALA 5950.0124
THR 5960.0138
THR 5970.0036
ASN 5980.0034
LYS 5990.0023
TYR 6000.0026
LEU 6010.0035
VAL 6020.0020
SER 6030.0022
ASP 6040.0019
ALA 6050.0019
TYR 6060.0023
LEU 6070.0031
LEU 6070.0031
LEU 6080.0018
HIS 6090.0017
SER 6100.0027
THR 6110.0019
ASP 6120.0015
MET 6130.0018
LEU 6140.0021
ALA 6150.0019
ASN 6160.0015
ILE 6170.0026
SER 6180.0024
THR 6190.0032
SER 6200.0037
LEU 6210.0034
SER 6220.0028
SER 6220.0028
LYS 6230.0019
GLY 6240.0024
GLU 6250.0029
GLU 6260.0026
ALA 6270.0028
SER 6280.0035
SER 6280.0035
ASN 6290.0031
TYR 6300.0032
THR 6310.0043
GLU 6320.0054
GLU 6320.0054
TRP 6330.0050
HIS 6340.0051
ALA 6350.0081
LYS 6360.0090
LEU 6370.0067
THR 6380.0077
LYS 6390.0115
LYS 6390.0114
GLU 6400.0103
PHE 6410.0071
GLN 6420.0100
LYS 6430.0117
ALA 6440.0097
TRP 6450.0077
ILE 6460.0085
THR 6470.0378
SER 6480.0566
SER 6480.0568
ASN 6490.0469
GLY 6500.0168
THR 6510.0265
MET 6520.0064
ALA 6530.0071
ASN 6540.0084
GLU 6550.0110
THR 6560.0120
GLN 6570.0067
THR 6580.0076
GLY 6590.0084
LEU 6600.0082
ALA 6610.0079
LEU 6620.0063
PRO 6630.0065
LEU 6640.0060
TYR 6650.0068
PHE 6660.0077
ASP 6670.0041
LEU 6680.0082
PHE 6690.0100
PRO 6700.0185
SER 6710.0190
ALA 6720.0428
GLU 6730.0343
GLU 6730.0343
GLN 6740.0070
ALA 6750.0096
GLN 6760.0217
SER 6770.0126
ALA 6780.0114
ALA 6790.0109
LYS 6800.0093
ARG 6810.0094
LEU 6820.0011
VAL 6830.0163
ASN 6840.0229
ILE 6850.0204
ILE 6860.0169
LYS 6870.0455
GLN 6880.0587
ASN 6890.0444
ASP 6900.0455
TYR 6910.0243
LYS 6920.0088
VAL 6930.0037
VAL 6930.0037
GLY 6940.0032
THR 6950.0051
GLY 6960.0090
PHE 6970.0057
ALA 6980.0067
GLY 6990.0062
THR 7000.0045
HIS 7010.0043
LEU 7020.0101
LEU 7030.0085
GLY 7040.0097
HIS 7050.0118
THR 7060.0112
LEU 7070.0129
SER 7080.0176
LYS 7090.0165
TYR 7100.0108
TYR 7100.0108
GLY 7110.0139
GLU 7120.0186
SER 7130.0205
ASP 7140.0213
ALA 7150.0160
PHE 7160.0146
TYR 7170.0134
SER 7180.0135
MET 7190.0134
LEU 7200.0118
ARG 7210.0106
GLN 7220.0136
THR 7230.0103
GLU 7240.0093
VAL 7250.0062
PRO 7260.0045
SER 7270.0047
TRP 7280.0052
LEU 7290.0051
TYR 7300.0040
GLN 7310.0035
VAL 7320.0043
VAL 7330.0033
MET 7340.0036
ASN 7350.0043
GLY 7360.0051
THR 7370.0050
THR 7380.0055
THR 7390.0055
TRP 7400.0057
GLU 7410.0064
ARG 7420.0066
TRP 7430.0042
ASP 7440.0045
SER 7450.0062
MET 7460.0049
LEU 7470.0033
PRO 7480.0028
ASN 7490.0036
GLY 7500.0036
SER 7510.0032
ILE 7520.0045
ASN 7530.0057
PRO 7540.0078
GLY 7550.0106
GLN 7560.0128
MET 7570.0089
THR 7580.0074
SER 7590.0070
PHE 7600.0058
ASN 7610.0061
HIS 7620.0065
TYR 7630.0053
ALA 7640.0059
VAL 7650.0054
GLY 7660.0041
SER 7670.0093
SER 7670.0093
VAL 7680.0087
GLY 7690.0083
SER 7700.0104
TRP 7710.0106
LEU 7720.0102
HIS 7730.0095
GLU 7740.0106
VAL 7750.0116
ILE 7760.0110
GLY 7770.0132
GLY 7780.0133
LEU 7790.0106
SER 7800.0095
PRO 7810.0076
ALA 7820.0094
GLU 7830.0073
PRO 7840.0040
GLY 7850.0042
TRP 7860.0053
ARG 7870.0080
ARG 7880.0083
ILE 7890.0097
ASN 7900.0125
ASN 7900.0125
ILE 7910.0172
GLU 7920.0166
VAL 7930.0156
VAL 7940.0133
PRO 7950.0123
GLY 7960.0107
GLY 7970.0136
ASP 7980.0198
LEU 7990.0150
GLN 8000.0182
GLN 8000.0181
GLN 8010.0138
ALA 8020.0149
SER 8030.0141
SER 8030.0141
THR 8040.0113
LYS 8050.0105
PHE 8060.0078
LEU 8070.0039
THR 8080.0044
PRO 8090.0052
TYR 8100.0059
GLY 8110.0052
MET 8120.0083
ALA 8130.0098
SER 8140.0125
THR 8150.0153
LYS 8160.0179
LYS 8160.0179
TRP 8170.0144
TRP 8180.0100
LEU 8190.0150
ASP 8200.0247
GLY 8210.0353
GLY 8280.0374
PHE 8290.0303
ASP 8300.0241
PHE 8310.0070
HIS 8320.0088
LEU 8330.0234
VAL 8340.0206
ALA 8350.0183
GLU 8360.0153
VAL 8370.0133
PRO 8380.0030
PRO 8390.0060
ASN 8400.0095
THR 8410.0058
ARG 8420.0085
ALA 8430.0181
THR 8440.0168
VAL 8450.0234
VAL 8460.0218
LEU 8470.0320
PRO 8480.0270
GLY 8490.0323
LYS 8500.0451
GLY 8510.0690
GLY 8520.0504
GLU 8530.0607
LYS 8540.0461
VAL 8550.0399
ASP 8560.0297
VAL 8570.0244
GLY 8580.0083
SER 8590.0047
GLY 8600.0112
VAL 8610.0210
HIS 8620.0260
GLU 8630.0282
TYR 8640.0265
HIS 8650.0192
VAL 8660.0247
ARG 8670.0362
ARG 8670.0361
CYS 8680.0473
VAL 8690.0157
LYS 8700.0434

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.