CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  rhamnosidase_6gsz_2  ***

<R2> analysis for 2606190905412989214

---  normal mode 56  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0537
ALA 20.0068
LEU 30.0063
SER 40.0064
ILE 50.0064
SER 60.0072
GLN 70.0071
VAL 80.0055
ALA 90.0048
PHE 100.0042
GLU 110.0059
HIS 120.0040
HIS 130.0031
ARG 140.0042
THR 150.0039
ALA 160.0030
LEU 170.0039
GLY 180.0052
ILE 190.0044
GLY 200.0067
GLU 210.0063
THR 220.0052
GLN 230.0052
PRO 240.0044
ARG 250.0059
VAL 260.0060
SER 270.0039
TRP 280.0040
ARG 290.0038
ARG 290.0038
PHE 300.0041
ASP 310.0040
GLY 320.0082
ASN 330.0089
VAL 340.0071
SER 350.0080
ASP 360.0070
TRP 370.0051
GLU 380.0030
GLN 390.0020
ARG 400.0029
ARG 400.0029
ALA 410.0033
TYR 420.0022
GLU 430.0029
ILE 440.0046
GLU 450.0056
VAL 460.0066
LYS 470.0060
ARG 480.0096
ALA 490.0130
GLY 500.0168
HIS 510.0146
ASP 520.0162
ALA 530.0134
ASP 540.0097
VAL 550.0060
PHE 560.0036
ARG 570.0025
SER 580.0039
SER 580.0040
GLU 590.0049
SER 600.0040
SER 610.0026
SER 610.0027
ASP 620.0047
SER 630.0048
VAL 640.0052
LEU 650.0055
VAL 660.0051
PRO 670.0068
TRP 680.0058
PRO 690.0069
SER 700.0060
SER 710.0054
PRO 720.0077
LEU 730.0049
GLN 740.0108
SER 750.0133
GLY 760.0129
GLU 770.0066
GLU 780.0051
ALA 790.0034
THR 800.0043
VAL 810.0049
ARG 820.0074
VAL 830.0059
ARG 840.0053
SER 850.0041
PHE 860.0037
GLY 870.0042
SER 880.0052
ASP 890.0090
GLY 900.0122
GLN 910.0143
HIS 920.0078
ASP 930.0070
THR 940.0075
PRO 950.0089
TRP 960.0085
SER 970.0092
ASP 980.0106
ALA 990.0077
VAL 1000.0052
THR 1010.0025
VAL 1020.0031
GLU 1030.0046
PRO 1040.0054
GLY 1050.0057
LEU 1060.0085
LEU 1070.0153
THR 1080.0237
PRO 1090.0251
ASP 1100.0277
ASP 1110.0195
TRP 1120.0086
HIS 1130.0092
ASP 1140.0070
ASP 1140.0070
ALA 1150.0050
VAL 1160.0063
VAL 1170.0063
ILE 1180.0070
ALA 1190.0104
SER 1200.0118
ASP 1210.0126
ARG 1220.0144
PRO 1230.0147
THR 1240.0213
GLU 1250.0282
VAL 1260.0411
ASP 1270.0358
ALA 1280.0275
THR 1290.0193
HIS 1300.0172
ARG 1310.0127
PRO 1320.0117
ILE 1330.0082
GLN 1340.0070
PHE 1350.0063
ARG 1360.0075
LYS 1370.0162
GLU 1380.0143
PHE 1390.0126
SER 1400.0119
VAL 1410.0109
ASP 1420.0282
ASP 1430.0250
SER 1440.0199
TYR 1450.0088
VAL 1460.0083
SER 1470.0066
ALA 1480.0057
ARG 1490.0051
LEU 1500.0043
TYR 1510.0043
ILE 1520.0019
THR 1530.0035
ALA 1540.0053
LEU 1550.0068
GLY 1560.0080
LEU 1570.0049
TYR 1580.0011
GLU 1590.0036
ALA 1600.0053
ARG 1610.0097
ILE 1620.0092
ASN 1630.0115
ASP 1640.0136
GLN 1650.0125
ARG 1660.0118
VAL 1670.0074
GLY 1680.0072
ASP 1690.0084
HIS 1700.0069
VAL 1710.0068
MET 1720.0060
ALA 1730.0058
PRO 1740.0059
GLY 1750.0060
TRP 1760.0067
GLN 1770.0103
SER 1780.0093
TYR 1790.0091
GLN 1800.0080
TYR 1810.0079
ARG 1820.0073
HIS 1830.0073
GLU 1840.0060
TYR 1850.0056
ASN 1860.0046
THR 1870.0045
TYR 1880.0043
ASP 1890.0048
VAL 1900.0047
THR 1910.0053
ASP 1920.0117
LEU 1930.0089
LEU 1940.0008
LYS 1950.0065
GLN 1960.0146
GLY 1970.0129
PRO 1980.0116
ASN 1990.0091
ALA 2000.0118
ILE 2010.0128
GLY 2020.0074
VAL 2030.0055
THR 2040.0047
VAL 2050.0061
GLY 2060.0098
GLU 2070.0103
GLY 2080.0101
TRP 2090.0102
TYR 2100.0113
SER 2110.0108
GLY 2120.0145
ARG 2130.0132
ILE 2140.0131
GLY 2150.0129
TYR 2160.0137
ASP 2170.0166
GLY 2180.0161
GLY 2190.0173
LYS 2200.0179
ARG 2210.0201
ASN 2220.0167
ILE 2230.0155
TYR 2240.0183
GLY 2250.0209
ASP 2260.0208
THR 2270.0105
LEU 2280.0091
GLY 2290.0075
LEU 2300.0062
LEU 2310.0059
SER 2320.0040
SER 2320.0040
LEU 2330.0046
LEU 2340.0050
LEU 2340.0050
VAL 2350.0059
VAL 2360.0063
THR 2370.0076
LYS 2380.0073
SER 2390.0066
ASP 2400.0140
GLY 2410.0151
SER 2420.0123
LYS 2430.0108
LEU 2440.0088
LEU 2440.0088
TYR 2450.0099
ILE 2460.0070
PRO 2470.0045
SER 2480.0044
ASP 2490.0039
SER 2500.0049
SER 2500.0049
SER 2510.0034
TRP 2520.0076
LYS 2530.0061
SER 2540.0056
SER 2550.0066
THR 2560.0084
GLY 2570.0092
PRO 2580.0086
ILE 2590.0086
ILE 2600.0087
SER 2610.0091
SER 2620.0084
GLU 2630.0079
ILE 2640.0089
ILE 2640.0089
TYR 2650.0092
ASP 2660.0090
GLY 2670.0061
GLU 2680.0065
GLU 2690.0058
TYR 2700.0074
ASP 2710.0076
SER 2720.0087
ARG 2730.0083
LEU 2740.0072
GLU 2750.0062
GLN 2760.0060
LYS 2770.0238
GLY 2780.0222
TRP 2790.0166
SER 2800.0161
GLN 2810.0194
VAL 2820.0210
GLY 2830.0261
PHE 2840.0219
ASN 2850.0209
SER 2860.0121
THR 2870.0134
GLY 2880.0113
TRP 2890.0088
LEU 2900.0086
GLY 2910.0094
THR 2920.0088
HIS 2930.0104
GLU 2940.0122
LEU 2950.0169
SER 2960.0206
PHE 2970.0214
PRO 2980.0216
LYS 2990.0171
GLU 3000.0204
ARG 3010.0153
LEU 3020.0097
ALA 3030.0080
SER 3040.0060
PRO 3050.0044
ASP 3060.0040
GLY 3070.0059
PRO 3080.0062
PRO 3090.0064
VAL 3100.0064
ARG 3110.0067
ARG 3120.0076
VAL 3130.0069
ALA 3140.0050
GLU 3150.0048
GLU 3150.0048
HIS 3160.0060
LYS 3170.0095
LEU 3180.0117
ALA 3190.0156
ASN 3200.0182
VAL 3210.0191
PHE 3220.0259
SER 3230.0269
SER 3240.0210
ALA 3250.0254
SER 3260.0261
GLY 3270.0226
LYS 3280.0173
THR 3290.0150
VAL 3300.0118
LEU 3310.0107
ASP 3320.0083
PHE 3330.0070
GLY 3340.0075
GLN 3350.0071
ASN 3360.0076
LEU 3370.0053
VAL 3380.0063
GLY 3390.0060
TRP 3400.0060
LEU 3410.0055
ARG 3420.0089
ILE 3430.0087
ARG 3440.0075
ARG 3440.0075
VAL 3450.0077
LYS 3460.0070
GLY 3470.0067
PRO 3480.0042
LYS 3490.0049
GLY 3500.0075
GLN 3510.0072
THR 3520.0046
ILE 3530.0044
ARG 3540.0032
PHE 3550.0033
VAL 3560.0019
HIS 3570.0041
THR 3580.0045
GLU 3590.0031
VAL 3600.0057
MET 3610.0088
GLU 3620.0185
ASN 3630.0224
GLY 3640.0182
GLU 3650.0102
VAL 3660.0050
ALA 3670.0099
THR 3680.0097
ARG 3690.0107
PRO 3700.0087
LEU 3710.0091
ARG 3720.0117
GLN 3730.0105
ALA 3740.0099
LYS 3750.0109
ALA 3760.0111
THR 3770.0047
ASP 3780.0050
HIS 3790.0046
PHE 3800.0061
THR 3810.0060
LEU 3820.0070
SER 3830.0059
GLY 3840.0052
GLU 3850.0058
GLU 3850.0057
GLY 3860.0082
GLY 3860.0081
VAL 3870.0054
GLN 3880.0057
GLU 3890.0063
GLU 3890.0063
TRP 3900.0071
GLU 3910.0081
PRO 3920.0068
SER 3930.0073
PHE 3940.0060
THR 3950.0054
TYR 3960.0072
HIS 3970.0076
GLY 3980.0077
PHE 3990.0060
ARG 4000.0060
TYR 4010.0063
VAL 4020.0036
GLN 4030.0034
VAL 4040.0040
ASP 4050.0049
GLY 4060.0057
TRP 4070.0106
PRO 4080.0094
ALA 4090.0098
ASP 4100.0098
THR 4110.0112
PRO 4120.0193
LEU 4130.0188
ASP 4140.0188
GLU 4150.0166
ASN 4160.0145
SER 4170.0109
VAL 4180.0106
THR 4190.0088
THR 4190.0088
ALA 4200.0094
ILE 4210.0082
VAL 4220.0060
VAL 4230.0066
HIS 4240.0068
SER 4250.0071
ASP 4260.0067
MET 4270.0046
GLU 4280.0046
ARG 4290.0050
THR 4300.0067
GLY 4310.0077
TYR 4320.0095
PHE 4330.0103
GLU 4340.0109
CYS 4350.0118
SER 4360.0126
ASN 4370.0092
PRO 4380.0109
LEU 4390.0087
ILE 4400.0078
SER 4410.0107
LYS 4420.0089
LEU 4430.0072
HIS 4440.0083
GLU 4450.0092
GLU 4450.0092
ASN 4460.0076
ILE 4470.0053
LEU 4480.0058
TRP 4490.0048
SER 4500.0045
MET 4510.0056
ARG 4520.0043
GLY 4530.0043
ASN 4540.0045
PHE 4550.0051
PHE 4560.0057
SER 4570.0056
ILE 4580.0056
PRO 4590.0067
THR 4600.0073
ASP 4610.0084
CYS 4620.0055
PRO 4630.0072
GLN 4640.0093
ARG 4650.0100
ASP 4660.0101
GLU 4670.0098
ARG 4680.0100
LEU 4690.0093
GLY 4700.0096
TRP 4710.0111
THR 4720.0072
GLY 4730.0064
ASP 4740.0067
ILE 4750.0071
HIS 4760.0062
ALA 4770.0033
PHE 4780.0037
SER 4790.0037
ARG 4800.0028
THR 4810.0033
ALA 4820.0053
ASN 4830.0060
PHE 4840.0063
ILE 4850.0054
TYR 4860.0049
ASP 4870.0036
THR 4880.0036
ALA 4890.0035
GLY 4900.0037
PHE 4910.0038
LEU 4920.0059
ARG 4930.0056
ALA 4940.0048
TRP 4950.0049
LEU 4960.0049
LYS 4970.0074
ASP 4980.0071
ALA 4990.0077
ARG 5000.0063
SER 5010.0051
GLU 5020.0078
GLN 5030.0081
LEU 5040.0051
ASN 5050.0073
HIS 5060.0107
SER 5070.0101
TYR 5080.0085
SER 5090.0113
LEU 5100.0123
PRO 5110.0145
TYR 5120.0149
VAL 5130.0138
ILE 5140.0123
PRO 5150.0108
ASN 5160.0107
ILE 5170.0156
HIS 5180.0172
GLY 5190.0156
ASN 5200.0170
GLY 5210.0203
GLU 5220.0189
THR 5230.0150
PRO 5240.0116
THR 5250.0098
SER 5260.0079
ILE 5270.0065
TRP 5280.0082
GLY 5290.0068
ASP 5300.0062
ALA 5310.0087
ILE 5320.0048
VAL 5330.0062
GLY 5340.0070
VAL 5350.0057
PRO 5360.0058
TRP 5370.0073
GLN 5380.0062
LEU 5390.0053
TYR 5400.0072
GLU 5410.0075
SER 5420.0059
PHE 5430.0067
GLY 5440.0086
ASP 5450.0088
LYS 5460.0102
VAL 5470.0129
MET 5480.0108
MET 5480.0107
LEU 5490.0117
GLU 5500.0129
GLU 5510.0111
GLN 5520.0088
TYR 5530.0099
GLY 5540.0078
GLY 5550.0067
ALA 5560.0089
LYS 5570.0095
ASP 5580.0074
TRP 5590.0083
VAL 5600.0082
ASP 5610.0065
LYS 5620.0042
GLY 5630.0091
ILE 5640.0078
VAL 5650.0056
ARG 5660.0055
ASN 5670.0306
ASP 5680.0537
VAL 5690.0455
GLY 5700.0331
LEU 5710.0078
TRP 5720.0050
ASP 5730.0105
ARG 5740.0144
SER 5750.0192
THR 5760.0156
PHE 5770.0131
GLN 5780.0087
TRP 5790.0086
ALA 5800.0069
ASP 5810.0087
TRP 5820.0097
LEU 5830.0106
ASP 5840.0125
PRO 5850.0139
LYS 5860.0142
ALA 5870.0162
PRO 5880.0161
ALA 5890.0154
ASP 5900.0177
ASP 5910.0179
PRO 5920.0117
GLY 5930.0126
ASP 5940.0126
ALA 5950.0117
THR 5960.0144
THR 5970.0102
ASN 5980.0073
LYS 5990.0023
TYR 6000.0040
LEU 6010.0094
VAL 6020.0072
SER 6030.0073
ASP 6040.0081
ALA 6050.0089
TYR 6060.0091
LEU 6070.0136
LEU 6070.0136
LEU 6080.0134
HIS 6090.0135
SER 6100.0139
THR 6110.0139
ASP 6120.0155
MET 6130.0132
LEU 6140.0138
ALA 6150.0142
ASN 6160.0122
ILE 6170.0135
SER 6180.0146
THR 6190.0199
SER 6200.0198
LEU 6210.0182
SER 6220.0254
SER 6220.0254
LYS 6230.0175
GLY 6240.0277
GLU 6250.0341
GLU 6260.0269
ALA 6270.0155
SER 6280.0204
SER 6280.0204
ASN 6290.0240
TYR 6300.0192
THR 6310.0155
GLU 6320.0157
GLU 6320.0156
TRP 6330.0171
HIS 6340.0148
ALA 6350.0150
LYS 6360.0185
LEU 6370.0175
THR 6380.0173
LYS 6390.0172
LYS 6390.0172
GLU 6400.0171
PHE 6410.0170
GLN 6420.0177
LYS 6430.0164
ALA 6440.0152
TRP 6450.0162
ILE 6460.0178
THR 6470.0318
SER 6480.0396
SER 6480.0396
ASN 6490.0275
GLY 6500.0135
THR 6510.0103
MET 6520.0135
ALA 6530.0161
ASN 6540.0173
GLU 6550.0157
THR 6560.0177
GLN 6570.0125
THR 6580.0125
GLY 6590.0124
LEU 6600.0123
ALA 6610.0124
LEU 6620.0126
PRO 6630.0108
LEU 6640.0100
TYR 6650.0115
PHE 6660.0115
ASP 6670.0113
LEU 6680.0153
PHE 6690.0108
PRO 6700.0160
SER 6710.0138
ALA 6720.0220
GLU 6730.0239
GLU 6730.0239
GLN 6740.0115
ALA 6750.0024
GLN 6760.0148
SER 6770.0064
ALA 6780.0069
ALA 6790.0114
LYS 6800.0130
ARG 6810.0114
LEU 6820.0122
VAL 6830.0136
ASN 6840.0113
ILE 6850.0049
ILE 6860.0055
LYS 6870.0158
GLN 6880.0208
ASN 6890.0171
ASP 6900.0175
TYR 6910.0056
LYS 6920.0121
VAL 6930.0115
VAL 6930.0115
GLY 6940.0110
THR 6950.0116
GLY 6960.0139
PHE 6970.0075
ALA 6980.0076
GLY 6990.0073
THR 7000.0071
HIS 7010.0071
LEU 7020.0094
LEU 7030.0086
GLY 7040.0087
HIS 7050.0096
THR 7060.0093
LEU 7070.0113
SER 7080.0160
LYS 7090.0158
TYR 7100.0124
TYR 7100.0124
GLY 7110.0158
GLU 7120.0139
SER 7130.0129
ASP 7140.0117
ALA 7150.0090
PHE 7160.0075
TYR 7170.0037
SER 7180.0027
MET 7190.0014
LEU 7200.0039
ARG 7210.0044
GLN 7220.0096
THR 7230.0128
GLU 7240.0144
VAL 7250.0157
PRO 7260.0146
SER 7270.0108
TRP 7280.0111
LEU 7290.0113
TYR 7300.0117
GLN 7310.0124
VAL 7320.0110
VAL 7330.0109
MET 7340.0101
ASN 7350.0107
GLY 7360.0104
THR 7370.0070
THR 7380.0071
THR 7390.0074
TRP 7400.0067
GLU 7410.0068
ARG 7420.0109
TRP 7430.0121
ASP 7440.0116
SER 7450.0093
MET 7460.0095
LEU 7470.0184
PRO 7480.0245
ASN 7490.0281
GLY 7500.0199
SER 7510.0164
ILE 7520.0117
ASN 7530.0128
PRO 7540.0160
GLY 7550.0126
GLN 7560.0095
MET 7570.0081
THR 7580.0068
SER 7590.0048
PHE 7600.0040
ASN 7610.0036
HIS 7620.0047
TYR 7630.0058
ALA 7640.0049
VAL 7650.0057
GLY 7660.0070
SER 7670.0053
SER 7670.0053
VAL 7680.0038
GLY 7690.0063
SER 7700.0067
TRP 7710.0048
LEU 7720.0078
HIS 7730.0085
GLU 7740.0085
VAL 7750.0078
ILE 7760.0075
GLY 7770.0106
GLY 7780.0094
LEU 7790.0095
SER 7800.0102
PRO 7810.0100
ALA 7820.0077
GLU 7830.0073
PRO 7840.0075
GLY 7850.0068
TRP 7860.0066
ARG 7870.0071
ARG 7880.0076
ILE 7890.0076
ASN 7900.0090
ASN 7900.0090
ILE 7910.0095
GLU 7920.0108
VAL 7930.0100
VAL 7940.0092
PRO 7950.0077
GLY 7960.0077
GLY 7970.0105
ASP 7980.0094
LEU 7990.0095
GLN 8000.0087
GLN 8000.0087
GLN 8010.0098
ALA 8020.0138
SER 8030.0126
SER 8030.0126
THR 8040.0116
LYS 8050.0102
PHE 8060.0090
LEU 8070.0056
THR 8080.0035
PRO 8090.0036
TYR 8100.0006
GLY 8110.0027
MET 8120.0079
ALA 8130.0077
SER 8140.0098
THR 8150.0106
LYS 8160.0128
LYS 8160.0128
TRP 8170.0100
TRP 8180.0065
LEU 8190.0052
ASP 8200.0081
GLY 8210.0133
GLY 8280.0147
PHE 8290.0112
ASP 8300.0086
PHE 8310.0031
HIS 8320.0082
LEU 8330.0117
VAL 8340.0121
ALA 8350.0097
GLU 8360.0096
VAL 8370.0068
PRO 8380.0032
PRO 8390.0023
ASN 8400.0032
THR 8410.0038
ARG 8420.0064
ALA 8430.0076
THR 8440.0080
VAL 8450.0078
VAL 8460.0081
LEU 8470.0117
PRO 8480.0108
GLY 8490.0189
LYS 8500.0256
GLY 8510.0283
GLY 8520.0204
GLU 8530.0173
LYS 8540.0134
VAL 8550.0164
ASP 8560.0166
VAL 8570.0136
GLY 8580.0063
SER 8590.0047
GLY 8600.0102
VAL 8610.0153
HIS 8620.0162
GLU 8630.0136
TYR 8640.0129
HIS 8650.0099
VAL 8660.0109
ARG 8670.0137
ARG 8670.0136
CYS 8680.0148
VAL 8690.0116
LYS 8700.0320

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.