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***  7AMA_L5_corrected  ***

B-factor analysis for ID 2608070735353363794

Overall B-factor prediction

Correlation= 0.449 for 202 C-alpha atoms.

B-factors for all residues

Residue-by-residue B-factor prediction for CA atoms

B-factors are computed based on the first 100 normal modes (B-PREDICT) and are scaled to match the overall B-factors in the submitted model (B-SCALED). A high correlation with the observations is an indicator that the normal modes capture well the overall flexibility features of the model. Comparison of the observed (B-OBS, blue) and the computed (B-SCALED, red) B-factors for all C-alpha atoms is presented below. Differences between B-factors from normal mode analysis and from X-ray crystallographic data may for example indicate regions where the protein flexibility is modified due to external factors such as tight crystall-packing.

  ATOM TYP  RES  RESID   B-PREDICT    B-SCALED      B-OBS
B-SCALEDB-OBS
     2 CA   PRO     19      0.1227    137.7422    184.8300
     9 CA   ARG     20      0.0739    115.5042    134.3500
    20 CA   THR     21      0.0356     98.0778    105.9300
    27 CA   VAL     22      0.0239     92.7416     90.1700
    34 CA   MET     23      0.0231     92.3562     93.8800
    42 CA   VAL     24      0.0164     89.3398     97.1100
    49 CA   ASN     25      0.0259     93.6301     97.5300
    57 CA   LEU     26      0.0249     93.1762    106.3700
    65 CA   ASN     27      0.0494    104.3581    120.9800
    73 CA   ILE     28      0.0389     99.5918    122.9400
    81 CA   HIS     29      0.0656    111.7380    168.5700
    91 CA   SER     40      0.0874    121.6734    133.3000
    97 CA   SER     41      0.1636    156.3884    132.9600
   103 CA   ASP     42      0.0553    107.0485    112.6600
   111 CA   TYR     43      0.0259     93.6557     91.0400
   123 CA   TYR     44      0.0267     94.0063    104.5100
   135 CA   ASN     45      0.0360     98.2741     96.6800
   143 CA   ARG     46      0.0291     95.0931     77.9700
   154 CA   SER     47      0.0141     88.2779     82.8400
   160 CA   THR     48      0.0118     87.2447     73.7300
   167 CA   SER     49      0.0101     86.4548     72.1200
   173 CA   PRO     50      0.0170     89.6082     73.9600
   180 CA   TRP     51      0.0206     91.2183     79.4500
   194 CA   ASN     52      0.0336     97.1421    104.5500
   202 CA   LEU     53      0.0408    100.4476    108.2200
   210 CA   HIS     54      0.0492    104.2452    118.6200
   220 CA   ARG     55      0.0517    105.4198    121.2000
   231 CA   ASN     56      0.0456    102.6188    118.8800
   239 CA   GLU     57      0.0536    106.2708    123.7500
   248 CA   ASP     58      0.0444    102.0870    114.2900
   256 CA   PRO     59      0.0646    111.2894    126.3300
   263 CA   GLU     60      0.0382     99.2686    109.6300
   272 CA   ARG     61      0.0207     91.2869    100.4000
   283 CA   TYR     62      0.0138     88.1356    105.0200
   295 CA   PRO     63      0.0175     89.8241    103.1100
   302 CA   SER     64      0.0299     95.4544    103.8600
   308 CA   VAL     65      0.0374     98.9014    112.6900
   315 CA   ILE     66      0.0288     94.9804    104.8400
   323 CA   TRP     67      0.0341     97.3637    108.4700
   337 CA   GLU     68      0.0297     95.3784    108.5100
   346 CA   ALA     69      0.0242     92.8589     93.7900
   351 CA   LYS     70      0.0328     96.8077    111.3500
   360 CA   CYS     71      0.0217     91.7560     97.1500
   366 CA   ARG     72      0.0325     96.6735    111.2400
   377 CA   HIS     73      0.0370     98.7227     96.0300
   387 CA   LEU     74      0.0498    104.5517    103.0100
   395 CA   GLY     75      0.0328     96.7828     96.6800
   399 CA   CYS     76      0.0210     91.4040     90.8200
   405 CA   ILE     77      0.0329     96.8306     92.9900
   413 CA   ASN     78      0.0792    117.9395     81.5100
   421 CA   ALA     79      0.2165    180.5056     96.7000
   426 CA   ASP     80      0.2514    196.3722    108.4800
   434 CA   GLY     81      0.1582    153.9316    103.8300
   438 CA   ASN     82      0.1195    136.3055    102.1000
   446 CA   VAL     83      0.0546    106.7254    104.0600
   453 CA   ASP     84      0.0595    108.9453    101.3100
   461 CA   TYR     85      0.0647    111.3214    113.5200
   473 CA   HIS     86      0.0832    119.7667    110.0800
   483 CA   MET     87      0.0315     96.1853     96.7400
   491 CA   ASN     88      0.0257     93.5370    101.4100
   499 CA   SER     89      0.0156     88.9776     80.0200
   505 CA   VAL     90      0.0168     89.5027     92.5900
   512 CA   PRO     91      0.0157     88.9933     95.1800
   519 CA   ILE     92      0.0140     88.2434    104.6900
   527 CA   GLN     93      0.0197     90.8188    109.2900
   536 CA   GLN     94      0.0185     90.2795    100.2000
   537 CA   GLN     94      0.0183     90.2033     97.0100
   551 CA   GLU     95      0.0215     91.6676     93.7200
   560 CA   ILE     96      0.0148     88.5770     84.7500
   568 CA   LEU     97      0.0124     87.5103     98.0400
   576 CA   VAL     98      0.0112     86.9323     89.4900
   583 CA   LEU     99      0.0103     86.5544     92.4200
   591 CA   ARG    100      0.0185     90.2823    102.9800
   602 CA   ARG    101      0.0269     94.1078    108.4400
   613 CA   GLU    102      0.0391     99.6562    116.4200
   622 CA   PRO    103      0.0752    116.1298    142.0200
   629 CA   PRO    104      0.0760    116.4705    142.2900
   636 CA   HIS    105      0.0787    117.6906    161.7300
   646 CA   CYS    106      0.0598    109.0977    150.4600
   652 CA   PRO    107      0.0518    105.4321    119.0000
   660 CA   ASN    108      0.0363     98.3894     98.4600
   661 CA   ASN    108      0.0360     98.2397     95.8900
   675 CA   SER    109      0.0286     94.8996     85.3700
   681 CA   PHE    110      0.0173     89.7514     91.0200
   692 CA   ARG    111      0.0191     90.5627    104.9300
   703 CA   LEU    112      0.0142     88.3253    108.1400
   711 CA   GLU    113      0.0192     90.5748    107.1000
   720 CA   LYS    114      0.0253     93.3560    108.2700
   729 CA   ILE    115      0.0228     92.2403    103.2000
   737 CA   LEU    116      0.0280     94.6034    101.0300
   745 CA   VAL    117      0.0189     90.4476    108.9000
   752 CA   SER    118      0.0197     90.8026     93.6600
   758 CA   VAL    119      0.0164     89.3231    103.7700
   765 CA   GLY    120      0.0143     88.3518     84.6300
   769 CA   CYS    121      0.0107     86.7167     82.4500
   775 CA   THR    122      0.0077     85.3635     79.8100
   782 CA   CYS    123      0.0088     85.8681     81.4600
   788 CA   VAL    124      0.0162     89.2363     91.1400
   795 CA   THR    125      0.0330     96.8848    114.1600
   802 CA   PRO    126      0.0897    122.7256    135.7100
   809 CA   ILE    127      0.3251    229.9516    169.8600
   817 CA   PRO     19      0.1664    157.6476    162.1100
   824 CA   ARG     20      0.0546    106.7441    122.0500
   835 CA   THR     21      0.0360     98.2715     98.1000
   842 CA   VAL     22      0.0234     92.5225     92.9600
   849 CA   MET     23      0.0219     91.8490     95.7400
   857 CA   VAL     24      0.0155     88.9166     98.6200
   864 CA   ASN     25      0.0247     93.0931    104.8600
   872 CA   LEU     26      0.0243     92.9049    101.6600
   880 CA   ASN     27      0.0449    102.3192    117.4100
   888 CA   ILE     28      0.0360     98.2555    131.0800
   896 CA   HIS     29      0.0591    108.7875    167.1100
   906 CA   SER     41      0.0743    115.6929    146.5600
   912 CA   ASP     42      0.0456    102.6325    122.6200
   921 CA   TYR     43      0.0205     91.1852    111.9700
   922 CA   TYR     43      0.0202     91.0526    110.5200
   944 CA   TYR     44      0.0212     91.4952    113.9600
   956 CA   ASN     45      0.0308     95.8640    103.3000
   964 CA   ARG     46      0.0254     93.4019     96.6000
   975 CA   SER     47      0.0123     87.4461     80.3700
   981 CA   THR     48      0.0111     86.9192     76.7900
   988 CA   SER     49      0.0096     86.2044     72.7800
   994 CA   PRO     50      0.0152     88.7808     71.3700
  1001 CA   TRP     51      0.0190     90.5239     81.0200
  1015 CA   ASN     52      0.0296     95.3304     76.3600
  1023 CA   LEU     53      0.0365     98.4829     84.6700
  1031 CA   HIS     54      0.0471    103.2964     88.1400
  1041 CA   ARG     55      0.0472    103.3410     96.4700
  1052 CA   ASN     56      0.0433    101.5801    101.1200
  1060 CA   GLU     57      0.0504    104.8318    105.5600
  1069 CA   ASP     58      0.0433    101.5679    112.6100
  1077 CA   PRO     59      0.0696    113.5427    121.1200
  1084 CA   GLU     60      0.0399    100.0379    124.3800
  1093 CA   ARG     61      0.0212     91.5161     99.3800
  1104 CA   TYR     62      0.0132     87.8801     96.7400
  1116 CA   PRO     63      0.0163     89.2903     94.2200
  1123 CA   SER     64      0.0286     94.8992    101.4300
  1129 CA   VAL     65      0.0317     96.2894     91.3200
  1136 CA   ILE     66      0.0228     92.2507     90.7700
  1144 CA   TRP     67      0.0257     93.5408     90.3200
  1158 CA   GLU     68      0.0258     93.6201     83.0700
  1167 CA   ALA     69      0.0217     91.7344     81.2400
  1172 CA   LYS     70      0.0265     93.9259     75.7500
  1181 CA   CYS     71      0.0205     91.2101     77.8300
  1187 CA   ARG     72      0.0303     95.6681     72.5400
  1198 CA   HIS     73      0.0354     97.9882     77.8400
  1208 CA   LEU     74      0.0510    105.0723     72.4600
  1216 CA   GLY     75      0.0317     96.2812     74.2900
  1220 CA   CYS     76      0.0203     91.0937     76.9600
  1226 CA   ILE     77      0.0305     95.7229     89.5500
  1234 CA   ASN     78      0.0751    116.0640     97.8300
  1242 CA   ALA     79      0.1984    172.2653    107.3800
  1247 CA   ASP     80      0.2678    203.8809    102.8200
  1255 CA   GLY     81      0.1650    157.0495     93.9000
  1259 CA   ASN     82      0.1254    138.9854     96.2100
  1267 CA   VAL     83      0.0517    105.4000     85.9200
  1274 CA   ASP     84      0.0564    107.5256     79.9500
  1282 CA   TYR     85      0.0645    111.2228     78.8700
  1294 CA   HIS     86      0.0874    121.6638     89.1900
  1304 CA   MET     87      0.0321     96.4578     81.0900
  1312 CA   ASN     88      0.0268     94.0563     76.1900
  1320 CA   SER     89      0.0159     89.0987     69.1700
  1326 CA   VAL     90      0.0177     89.9300     73.2600
  1333 CA   PRO     91      0.0158     89.0695     70.7400
  1340 CA   ILE     92      0.0151     88.7120     79.0900
  1348 CA   GLN     93      0.0230     92.3259     82.2300
  1357 CA   GLN     94      0.0204     91.1571     90.2200
  1366 CA   GLU     95      0.0277     94.4794     97.3900
  1375 CA   ILE     96      0.0162     89.2090     91.6600
  1383 CA   LEU     97      0.0131     87.8252     90.9400
  1391 CA   VAL     98      0.0112     86.9459     89.0700
  1398 CA   LEU     99      0.0106     86.6603     96.7400
  1406 CA   ARG    100      0.0192     90.6005    104.3400
  1417 CA   ARG    101      0.0288     94.9539    108.2000
  1428 CA   GLU    102      0.0409    100.4618    118.3800
  1437 CA   PRO    103      0.0762    116.5498    148.8200
  1444 CA   PRO    104      0.0798    118.1900    152.3400
  1451 CA   HIS    105      0.0840    120.1235    175.2200
  1461 CA   CYS    106      0.0666    112.1732    147.8900
  1467 CA   PRO    107      0.0613    109.7713    120.8400
  1475 CA   ASN    108      0.0411    100.5759    100.8400
  1476 CA   ASN    108      0.0392     99.6971    106.7900
  1490 CA   SER    109      0.0307     95.8332    103.5500
  1496 CA   PHE    110      0.0185     90.2814    102.7600
  1507 CA   ARG    111      0.0200     90.9508     98.9500
  1518 CA   LEU    112      0.0153     88.7988     99.2200
  1526 CA   GLU    113      0.0207     91.2769    105.0000
  1535 CA   LYS    114      0.0287     94.9136    109.1100
  1544 CA   ILE    115      0.0244     92.9694     86.7700
  1552 CA   LEU    116      0.0292     95.1458     82.9800
  1560 CA   VAL    117      0.0192     90.5781     83.4100
  1567 CA   SER    118      0.0201     91.0050     77.7400
  1568 CA   SER    118      0.0199     90.9343     74.3200
  1576 CA   VAL    119      0.0157     89.0119     83.0500
  1583 CA   GLY    120      0.0133     87.9295     79.1100
  1587 CA   CYS    121      0.0106     86.6584     73.9000
  1593 CA   THR    122      0.0079     85.4659     68.5100
  1600 CA   CYS    123      0.0093     86.0668     76.2300
  1606 CA   VAL    124      0.0179     89.9899     78.3500
  1613 CA   THR    125      0.0346     97.6275     96.2800
  1620 CA   PRO    126      0.0890    122.4159     92.2100
  1627 CA   ILE    127      0.2695    204.6627    117.6600

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.