CNRS Nantes University US2B US2B
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***  loop2_roda_ext  ***

Normal Mode Analysis for ID 2608102056014079236

The following table indicates for every normal mode its frequency (black, normalized relative to the lowest mode frequency) and its collectivity (magenta). If a second structure was submitted, the cummulative overlap between the normal modes and the conformational change is computed (red). The corresponding amplitude (dq) is then also given (green). Click on the mode link to obtain a visualization of the mean square displacement <R2> of the C-alpha atoms associated to each mode.

[HELP on collectivity] [HELP on overlap]

<R2> frequency collectivity
mode 7 1.00 0.7601
mode 8 1.08 0.5857
mode 9 1.36 0.7078
mode 10 2.57 0.3217
mode 11 2.77 0.2696
mode 12 3.05 0.1851
mode 13 3.84 0.6059
mode 14 4.51 0.0912
mode 15 4.68 0.0286
mode 16 4.92 0.2036
mode 17 6.17 0.1753
mode 18 6.97 0.3017
mode 19 7.31 0.3633
mode 20 8.31 0.5068
mode 21 8.57 0.5087
mode 22 9.19 0.6145
mode 23 9.56 0.2815
mode 24 9.82 0.2876
mode 25 10.42 0.3830
mode 26 10.57 0.4329
mode 27 10.77 0.3233
mode 28 11.54 0.2445
mode 29 12.05 0.3426
mode 30 12.28 0.3266
mode 31 12.51 0.2525
mode 32 12.76 0.2935
mode 33 13.05 0.2262
mode 34 13.20 0.2900
mode 35 13.37 0.2671
mode 36 13.65 0.2127
mode 37 13.69 0.1475
mode 38 13.72 0.1666
mode 39 14.03 0.5007
mode 40 14.51 0.3884
mode 41 14.77 0.3856
mode 42 15.12 0.5145
mode 43 15.34 0.5503
mode 44 15.54 0.3413
mode 45 15.73 0.3762
mode 46 15.77 0.3085
mode 47 16.02 0.3120
mode 48 16.19 0.0785
mode 49 16.22 0.0826
mode 50 16.38 0.2769
mode 51 16.48 0.3752
mode 52 16.62 0.5067
mode 53 16.91 0.2695
mode 54 17.08 0.3450
mode 55 17.38 0.4101
mode 56 17.42 0.4641
mode 57 17.66 0.5308
mode 58 17.81 0.4476
mode 59 18.01 0.4556
mode 60 18.08 0.4034
mode 61 18.18 0.3277
mode 62 18.25 0.4801
mode 63 18.46 0.5289
mode 64 18.75 0.4453
mode 65 18.82 0.3678
mode 66 19.02 0.3880
mode 67 19.21 0.4012
mode 68 19.42 0.5126
mode 69 19.52 0.4700
mode 70 19.66 0.3277
mode 71 19.76 0.4062
mode 72 19.90 0.4843
mode 73 20.24 0.4508
mode 74 20.30 0.5301
mode 75 20.38 0.4469
mode 76 20.46 0.4338
mode 77 20.51 0.4090
mode 78 20.64 0.4407
mode 79 20.81 0.5091
mode 80 20.82 0.4161
mode 81 20.98 0.5215
mode 82 21.11 0.3710
mode 83 21.21 0.3288
mode 84 21.28 0.0454
mode 85 21.31 0.0840
mode 86 21.34 0.5107
mode 87 21.39 0.4703
mode 88 21.63 0.3928
mode 89 21.72 0.4389
mode 90 21.79 0.4110
mode 91 21.98 0.4410
mode 92 22.06 0.4133
mode 93 22.21 0.3449
mode 94 22.33 0.4669
mode 95 22.44 0.2000
mode 96 22.46 0.3220
mode 97 22.53 0.2212
mode 98 22.59 0.2074
mode 99 22.79 0.3808
mode 100 23.13 0.4598
mode 101 23.24 0.4206
mode 102 23.32 0.3716
mode 103 23.39 0.3113
mode 104 23.40 0.3091
mode 105 23.44 0.2642
mode 106 23.54 0.4509

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.