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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 10  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0280
ALA 10.0098
ASP 20.0096
VAL 30.0087
VAL 40.0088
MET 50.0084
THR 60.0090
GLN 70.0084
THR 80.0091
PRO 90.0098
SER 100.0096
SER 100.0096
SER 110.0090
VAL 120.0086
VAL 120.0085
SER 130.0080
SER 130.0080
ALA 140.0077
ALA 150.0070
VAL 160.0058
GLY 170.0066
GLY 180.0077
THR 190.0077
VAL 200.0079
THR 210.0083
THR 210.0083
ILE 220.0079
ASN 230.0077
CYS 240.0074
CYS 240.0074
GLN 250.0077
GLN 250.0076
ALA 260.0073
SER 270.0078
GLN 280.0069
SER 290.0059
ILE 300.0060
SER 310.0050
SER 310.0050
ALA 320.0050
TYR 330.0058
LEU 340.0059
ALA 350.0062
TRP 360.0067
TYR 370.0057
GLN 380.0061
GLN 390.0067
LYS 400.0045
PRO 410.0045
GLY 420.0055
GLN 430.0071
PRO 440.0067
PRO 450.0067
LYS 460.0070
LEU 470.0064
LEU 480.0061
ILE 490.0058
ILE 490.0058
TYR 500.0054
ASP 510.0050
ALA 520.0054
SER 530.0050
ASP 540.0047
LEU 550.0048
ALA 560.0049
SER 570.0044
SER 570.0044
GLY 580.0046
VAL 590.0055
SER 600.0061
SER 610.0059
ARG 620.0064
PHE 630.0065
LYS 640.0062
GLY 650.0060
SER 660.0058
GLY 670.0055
SER 680.0050
GLY 690.0053
THR 700.0063
GLN 710.0065
PHE 720.0065
THR 730.0070
LEU 740.0069
THR 750.0071
ILE 760.0071
SER 770.0070
SER 770.0070
ASP 780.0068
LEU 790.0063
GLU 800.0049
CYS 810.0045
ALA 820.0051
ASP 830.0057
ALA 840.0053
ALA 850.0060
THR 860.0066
TYR 870.0066
TYR 880.0074
CYS 890.0069
CYS 890.0069
GLN 900.0069
THR 910.0074
TYR 920.0071
TYR 930.0067
ALA 940.0081
ILE 950.0085
ILE 960.0086
THR 970.0087
TYR 980.0086
GLY 990.0091
ALA 1000.0083
ALA 1010.0086
PHE 1020.0085
GLY 1030.0075
GLY 1040.0081
GLY 1050.0081
THR 1060.0079
GLU 1070.0073
GLU 1070.0073
VAL 1080.0067
VAL 1090.0063
VAL 1100.0056
LYS 1110.0060
ARG 1120.0076
THR 1130.0070
VAL 1140.0106
ALA 1150.0130
ALA 1160.0149
PRO 1170.0147
SER 1180.0156
SER 1180.0156
VAL 1190.0141
PHE 1200.0121
ILE 1210.0103
PHE 1220.0059
PRO 1230.0044
PRO 1240.0037
SER 1250.0070
ASP 1260.0132
GLU 1270.0127
GLN 1280.0108
LEU 1290.0134
LYS 1300.0195
SER 1310.0189
GLY 1320.0175
THR 1330.0116
ALA 1340.0063
SER 1350.0040
VAL 1360.0034
VAL 1370.0070
CYS 1380.0109
LEU 1390.0125
LEU 1400.0147
ASN 1410.0153
ASN 1420.0144
ASN 1420.0144
PHE 1430.0137
TYR 1440.0118
PRO 1450.0160
ARG 1460.0166
GLU 1470.0194
ALA 1480.0203
LYS 1490.0209
VAL 1500.0180
GLN 1510.0187
TRP 1520.0138
LYS 1530.0135
VAL 1540.0097
ASP 1550.0134
ASN 1560.0170
ALA 1570.0139
LEU 1580.0159
GLN 1590.0130
SER 1600.0158
GLY 1610.0166
ASN 1620.0121
SER 1630.0100
GLN 1640.0123
GLU 1650.0141
SER 1660.0138
SER 1660.0139
VAL 1670.0147
VAL 1670.0148
THR 1680.0148
GLU 1690.0076
GLU 1690.0076
GLN 1700.0078
ASP 1710.0083
SER 1720.0067
LYS 1730.0053
ASP 1740.0057
CYS 1750.0078
THR 1760.0101
TYR 1770.0126
SER 1780.0149
LEU 1790.0144
SER 1800.0126
SER 1810.0125
THR 1820.0092
LEU 1830.0072
THR 1840.0070
LEU 1850.0059
SER 1860.0101
LYS 1870.0123
ALA 1880.0141
ASP 1890.0083
TYR 1900.0072
GLU 1910.0128
LYS 1920.0117
HIS 1930.0103
LYS 1940.0144
LYS 1940.0144
VAL 1950.0145
TYR 1960.0096
ALA 1970.0132
CYS 1980.0147
CYS 1980.0148
GLU 1990.0175
VAL 2000.0188
THR 2010.0224
HIS 2020.0206
GLN 2030.0213
GLY 2040.0187
LEU 2050.0215
SER 2060.0254
SER 2070.0255
PRO 2080.0231
VAL 2090.0199
THR 2100.0173
LYS 2110.0159
SER 2120.0140
PHE 2130.0126
ASN 2140.0168
ARG 2150.0144
GLY 2160.0191
GLU 2170.0220
SER 20.0129
VAL 30.0118
GLU 40.0112
GLU 50.0096
SER 60.0084
GLY 70.0065
GLY 80.0067
ARG 90.0061
LEU 100.0073
VAL 110.0043
THR 120.0041
PRO 130.0025
GLY 140.0009
THR 150.0007
PRO 160.0027
LEU 170.0037
THR 180.0056
LEU 190.0070
THR 200.0093
CYS 210.0105
THR 220.0117
VAL 230.0124
SER 240.0135
GLY 250.0141
PHE 260.0129
SER 270.0126
LEU 280.0120
SER 290.0119
SER 290.0119
ASP 300.0119
TYR 310.0113
ALA 320.0105
MET 330.0104
SER 340.0099
TRP 350.0096
VAL 360.0096
ARG 370.0094
GLN 380.0089
ALA 390.0096
PRO 400.0099
GLY 410.0108
LYS 420.0110
GLY 430.0105
LEU 440.0094
GLU 450.0093
TRP 460.0093
ILE 470.0095
GLY 480.0097
ILE 490.0099
ILE 500.0102
TYR 510.0106
ALA 520.0115
SER 530.0116
GLY 540.0111
SER 550.0104
THR 560.0100
THR 560.0100
TYR 570.0095
TYR 580.0093
ALA 590.0101
SER 600.0102
TRP 610.0098
ALA 620.0093
LYS 630.0094
GLY 640.0087
ARG 650.0081
PHE 660.0084
THR 670.0087
ILE 680.0095
SER 690.0101
LYS 700.0108
THR 710.0118
SER 720.0127
THR 730.0126
THR 740.0116
VAL 750.0106
ASP 760.0095
LEU 770.0085
LYS 780.0070
ILE 790.0061
THR 800.0051
SER 810.0038
PRO 820.0042
THR 830.0052
THR 840.0071
GLU 850.0087
ASP 860.0073
THR 870.0076
ALA 880.0089
THR 890.0087
TYR 900.0086
PHE 910.0094
CYS 920.0099
CYS 920.0099
ALA 930.0099
ARG 940.0102
TYR 950.0094
TYR 960.0085
TYR 960.0085
ALA 970.0073
GLY 980.0071
SER 990.0081
ASP 1000.0087
ILE 1010.0104
ILE 1010.0104
TRP 1020.0098
GLY 1030.0100
PRO 1040.0101
GLY 1050.0092
THR 1060.0081
LEU 1070.0077
LEU 1070.0076
VAL 1080.0058
THR 1090.0071
VAL 1100.0061
SER 1110.0073
SER 1120.0081
ALA 1130.0112
SER 1140.0134
THR 1150.0154
LYS 1160.0164
GLY 1170.0166
PRO 1180.0154
SER 1190.0131
VAL 1200.0098
PHE 1210.0059
PRO 1220.0018
LEU 1230.0039
ALA 1240.0064
PRO 1250.0113
SER 1260.0143
GLY 1330.0280
THR 1340.0231
THR 1340.0232
ALA 1350.0174
ALA 1360.0136
LEU 1370.0095
GLY 1380.0079
CYS 1390.0072
CYS 1390.0070
LEU 1400.0079
VAL 1410.0115
LYS 1420.0121
ASP 1430.0134
TYR 1440.0154
PHE 1450.0152
PRO 1460.0151
GLU 1470.0156
GLU 1470.0156
PRO 1480.0182
VAL 1490.0181
THR 1500.0198
VAL 1510.0173
SER 1520.0172
TRP 1530.0141
ASN 1540.0140
SER 1550.0177
GLY 1560.0220
ALA 1570.0213
LEU 1580.0202
THR 1590.0234
SER 1600.0241
SER 1600.0242
GLY 1610.0215
VAL 1620.0187
HIS 1630.0151
THR 1640.0144
PHE 1650.0145
PRO 1660.0149
ALA 1670.0139
VAL 1680.0138
VAL 1680.0138
LEU 1690.0148
GLN 1700.0131
SER 1710.0135
SER 1720.0139
GLY 1730.0154
LEU 1740.0147
TYR 1750.0140
SER 1760.0122
SER 1760.0122
LEU 1770.0121
SER 1780.0107
SER 1780.0107
SER 1790.0120
VAL 1800.0117
VAL 1810.0154
THR 1820.0176
VAL 1830.0192
PRO 1840.0248
SER 1850.0232
SER 1850.0232
SER 1860.0266
SER 1870.0217
LEU 1880.0175
GLY 1890.0199
THR 1900.0194
GLN 1910.0157
GLN 1910.0158
THR 1920.0093
TYR 1930.0086
ILE 1940.0073
CYS 1950.0106
CYS 1950.0105
ASN 1960.0144
VAL 1970.0160
ASN 1980.0204
ASN 1980.0204
HIS 1990.0198
LYS 2000.0222
PRO 2010.0204
SER 2020.0208
ASN 2030.0233
THR 2040.0207
LYS 2050.0202
VAL 2060.0152
ASP 2070.0119
LYS 2080.0064
LYS 2090.0021
VAL 2100.0032
GLU 2110.0077
PRO 2120.0130
LYS 2130.0143
SER 2140.0273

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.