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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 100  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0702
ALA 10.0192
ASP 20.0066
VAL 30.0056
VAL 40.0042
MET 50.0043
THR 60.0035
GLN 70.0033
THR 80.0062
PRO 90.0088
SER 100.0152
SER 100.0153
SER 110.0061
VAL 120.0085
VAL 120.0085
SER 130.0138
SER 130.0138
ALA 140.0071
ALA 150.0019
VAL 160.0111
GLY 170.0156
GLY 180.0063
THR 190.0071
VAL 200.0111
THR 210.0128
THR 210.0129
ILE 220.0120
ASN 230.0114
CYS 240.0103
CYS 240.0105
GLN 250.0094
GLN 250.0094
ALA 260.0050
SER 270.0071
GLN 280.0067
SER 290.0058
ILE 300.0022
SER 310.0041
SER 310.0041
ALA 320.0042
TYR 330.0064
LEU 340.0060
ALA 350.0070
TRP 360.0087
TYR 370.0069
GLN 380.0090
GLN 390.0098
LYS 400.0234
PRO 410.0264
GLY 420.0264
GLN 430.0257
PRO 440.0135
PRO 450.0078
LYS 460.0112
LEU 470.0080
LEU 480.0071
ILE 490.0074
ILE 490.0075
TYR 500.0107
ASP 510.0112
ALA 520.0052
SER 530.0139
ASP 540.0196
LEU 550.0117
ALA 560.0118
SER 570.0126
SER 570.0126
GLY 580.0310
VAL 590.0170
SER 600.0135
SER 610.0032
ARG 620.0018
PHE 630.0030
LYS 640.0050
GLY 650.0053
SER 660.0104
GLY 670.0061
SER 680.0058
GLY 690.0051
THR 700.0078
GLN 710.0110
PHE 720.0131
THR 730.0091
LEU 740.0091
THR 750.0097
ILE 760.0058
SER 770.0030
SER 770.0030
ASP 780.0048
LEU 790.0104
GLU 800.0176
CYS 810.0194
ALA 820.0141
ASP 830.0120
ALA 840.0111
ALA 850.0077
THR 860.0068
TYR 870.0078
TYR 880.0098
CYS 890.0091
CYS 890.0091
GLN 900.0103
THR 910.0061
TYR 920.0044
TYR 930.0005
ALA 940.0076
ILE 950.0058
ILE 960.0063
THR 970.0059
TYR 980.0068
GLY 990.0064
ALA 1000.0077
ALA 1010.0083
PHE 1020.0091
GLY 1030.0098
GLY 1040.0121
GLY 1050.0136
THR 1060.0075
GLU 1070.0079
GLU 1070.0079
VAL 1080.0075
VAL 1090.0138
VAL 1100.0085
LYS 1110.0056
ARG 1120.0162
THR 1130.0150
VAL 1140.0116
ALA 1150.0073
ALA 1160.0048
PRO 1170.0025
SER 1180.0020
SER 1180.0020
VAL 1190.0024
PHE 1200.0030
ILE 1210.0038
PHE 1220.0032
PRO 1230.0036
PRO 1240.0014
SER 1250.0041
ASP 1260.0065
GLU 1270.0036
GLN 1280.0019
LEU 1290.0022
LYS 1300.0075
SER 1310.0058
GLY 1320.0108
THR 1330.0023
ALA 1340.0011
SER 1350.0022
VAL 1360.0016
VAL 1370.0017
CYS 1380.0012
LEU 1390.0021
LEU 1400.0019
ASN 1410.0014
ASN 1420.0035
ASN 1420.0035
PHE 1430.0036
TYR 1440.0064
PRO 1450.0084
ARG 1460.0090
GLU 1470.0085
ALA 1480.0062
LYS 1490.0070
VAL 1500.0059
GLN 1510.0034
TRP 1520.0032
LYS 1530.0051
VAL 1540.0019
ASP 1550.0026
ASN 1560.0028
ALA 1570.0092
LEU 1580.0087
GLN 1590.0064
SER 1600.0135
GLY 1610.0077
ASN 1620.0119
SER 1630.0114
GLN 1640.0073
GLU 1650.0064
SER 1660.0034
SER 1660.0035
VAL 1670.0046
VAL 1670.0047
THR 1680.0055
GLU 1690.0059
GLU 1690.0057
GLN 1700.0047
ASP 1710.0039
SER 1720.0130
LYS 1730.0158
ASP 1740.0136
CYS 1750.0062
THR 1760.0040
TYR 1770.0026
SER 1780.0035
LEU 1790.0038
SER 1800.0034
SER 1810.0034
THR 1820.0036
LEU 1830.0045
THR 1840.0055
LEU 1850.0063
SER 1860.0065
LYS 1870.0057
ALA 1880.0067
ASP 1890.0069
TYR 1900.0040
GLU 1910.0036
LYS 1920.0045
HIS 1930.0084
LYS 1940.0109
LYS 1940.0109
VAL 1950.0136
TYR 1960.0052
ALA 1970.0045
CYS 1980.0046
CYS 1980.0046
GLU 1990.0003
VAL 2000.0014
THR 2010.0020
HIS 2020.0048
GLN 2030.0061
GLY 2040.0084
LEU 2050.0137
SER 2060.0127
SER 2070.0135
PRO 2080.0065
VAL 2090.0031
THR 2100.0024
LYS 2110.0063
SER 2120.0060
PHE 2130.0061
ASN 2140.0095
ARG 2150.0103
GLY 2160.0107
GLU 2170.0098
SER 20.0264
VAL 30.0060
GLU 40.0083
GLU 50.0064
SER 60.0053
GLY 70.0079
GLY 80.0058
ARG 90.0052
LEU 100.0053
VAL 110.0114
THR 120.0100
PRO 130.0092
GLY 140.0237
THR 150.0201
PRO 160.0209
LEU 170.0076
THR 180.0087
LEU 190.0089
THR 200.0142
CYS 210.0110
THR 220.0131
VAL 230.0098
SER 240.0355
GLY 250.0601
PHE 260.0112
SER 270.0105
LEU 280.0084
SER 290.0141
SER 290.0142
ASP 300.0124
TYR 310.0067
ALA 320.0046
MET 330.0042
SER 340.0043
TRP 350.0046
VAL 360.0066
ARG 370.0075
GLN 380.0202
ALA 390.0340
PRO 400.0392
GLY 410.0702
LYS 420.0338
GLY 430.0333
LEU 440.0096
GLU 450.0101
TRP 460.0089
ILE 470.0069
GLY 480.0057
ILE 490.0054
ILE 500.0018
TYR 510.0028
ALA 520.0034
SER 530.0182
GLY 540.0100
SER 550.0105
THR 560.0070
THR 560.0071
TYR 570.0082
TYR 580.0123
ALA 590.0127
SER 600.0120
TRP 610.0124
ALA 620.0112
LYS 630.0166
GLY 640.0357
ARG 650.0151
PHE 660.0156
THR 670.0252
ILE 680.0104
SER 690.0064
LYS 700.0019
THR 710.0240
SER 720.0366
THR 730.0286
THR 740.0107
VAL 750.0080
ASP 760.0129
LEU 770.0134
LYS 780.0141
ILE 790.0098
THR 800.0148
SER 810.0181
PRO 820.0193
THR 830.0279
THR 840.0168
GLU 850.0189
ASP 860.0161
THR 870.0117
ALA 880.0150
THR 890.0075
TYR 900.0081
PHE 910.0087
CYS 920.0084
CYS 920.0083
ALA 930.0074
ARG 940.0043
TYR 950.0086
TYR 960.0077
TYR 960.0075
ALA 970.0078
GLY 980.0068
SER 990.0088
ASP 1000.0105
ILE 1010.0095
ILE 1010.0095
TRP 1020.0107
GLY 1030.0136
PRO 1040.0104
GLY 1050.0089
THR 1060.0073
LEU 1070.0079
LEU 1070.0079
VAL 1080.0075
THR 1090.0075
VAL 1100.0100
SER 1110.0212
SER 1120.0508
ALA 1130.0250
SER 1140.0348
THR 1150.0153
LYS 1160.0083
GLY 1170.0077
PRO 1180.0069
SER 1190.0076
VAL 1200.0069
PHE 1210.0074
PRO 1220.0027
LEU 1230.0023
ALA 1240.0022
PRO 1250.0038
SER 1260.0047
GLY 1330.0050
THR 1340.0013
THR 1340.0014
ALA 1350.0051
ALA 1360.0030
LEU 1370.0006
GLY 1380.0026
CYS 1390.0071
CYS 1390.0072
LEU 1400.0069
VAL 1410.0059
LYS 1420.0082
ASP 1430.0082
TYR 1440.0069
PHE 1450.0074
PRO 1460.0072
GLU 1470.0071
GLU 1470.0071
PRO 1480.0083
VAL 1490.0068
THR 1500.0064
VAL 1510.0071
SER 1520.0067
TRP 1530.0059
ASN 1540.0102
SER 1550.0217
GLY 1560.0154
ALA 1570.0147
LEU 1580.0087
THR 1590.0175
SER 1600.0060
SER 1600.0060
GLY 1610.0064
VAL 1620.0054
HIS 1630.0034
THR 1640.0042
PHE 1650.0033
PRO 1660.0050
ALA 1670.0051
VAL 1680.0044
VAL 1680.0044
LEU 1690.0098
GLN 1700.0083
SER 1710.0112
SER 1720.0099
GLY 1730.0060
LEU 1740.0060
TYR 1750.0053
SER 1760.0058
SER 1760.0059
LEU 1770.0063
SER 1780.0047
SER 1780.0047
SER 1790.0048
VAL 1800.0041
VAL 1810.0028
THR 1820.0038
VAL 1830.0043
PRO 1840.0083
SER 1850.0022
SER 1850.0022
SER 1860.0092
SER 1870.0062
LEU 1880.0052
GLY 1890.0039
THR 1900.0072
GLN 1910.0045
GLN 1910.0045
THR 1920.0044
TYR 1930.0004
ILE 1940.0030
CYS 1950.0061
CYS 1950.0062
ASN 1960.0064
VAL 1970.0044
ASN 1980.0016
ASN 1980.0016
HIS 1990.0086
LYS 2000.0136
PRO 2010.0090
SER 2020.0141
ASN 2030.0118
THR 2040.0080
LYS 2050.0174
VAL 2060.0052
ASP 2070.0111
LYS 2080.0043
LYS 2090.0024
VAL 2100.0033
GLU 2110.0170
PRO 2120.0123
LYS 2130.0118
SER 2140.0080

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.