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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 101  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0590
ALA 10.0234
ASP 20.0116
VAL 30.0082
VAL 40.0066
MET 50.0062
THR 60.0076
GLN 70.0072
THR 80.0058
PRO 90.0054
SER 100.0140
SER 100.0140
SER 110.0074
VAL 120.0082
VAL 120.0080
SER 130.0127
SER 130.0125
ALA 140.0157
ALA 150.0183
VAL 160.0129
GLY 170.0109
GLY 180.0136
THR 190.0087
VAL 200.0078
THR 210.0081
THR 210.0082
ILE 220.0041
ASN 230.0033
CYS 240.0043
CYS 240.0043
GLN 250.0037
GLN 250.0039
ALA 260.0018
SER 270.0045
GLN 280.0081
SER 290.0079
ILE 300.0032
SER 310.0038
SER 310.0038
ALA 320.0063
TYR 330.0056
LEU 340.0044
ALA 350.0047
TRP 360.0047
TYR 370.0125
GLN 380.0130
GLN 390.0102
LYS 400.0231
PRO 410.0331
GLY 420.0347
GLN 430.0072
PRO 440.0047
PRO 450.0052
LYS 460.0160
LEU 470.0135
LEU 480.0107
ILE 490.0082
ILE 490.0083
TYR 500.0096
ASP 510.0087
ALA 520.0068
SER 530.0041
ASP 540.0078
LEU 550.0093
ALA 560.0208
SER 570.0226
SER 570.0227
GLY 580.0407
VAL 590.0203
SER 600.0277
SER 610.0122
ARG 620.0058
PHE 630.0057
LYS 640.0032
GLY 650.0027
SER 660.0033
GLY 670.0132
SER 680.0124
GLY 690.0108
THR 700.0071
GLN 710.0083
PHE 720.0093
THR 730.0048
LEU 740.0026
THR 750.0033
ILE 760.0061
SER 770.0040
SER 770.0040
ASP 780.0012
LEU 790.0044
GLU 800.0062
CYS 810.0092
ALA 820.0173
ASP 830.0128
ALA 840.0102
ALA 850.0136
THR 860.0104
TYR 870.0114
TYR 880.0035
CYS 890.0059
CYS 890.0059
GLN 900.0065
THR 910.0046
TYR 920.0049
TYR 930.0035
ALA 940.0058
ILE 950.0032
ILE 960.0125
THR 970.0077
TYR 980.0030
GLY 990.0034
ALA 1000.0050
ALA 1010.0069
PHE 1020.0081
GLY 1030.0087
GLY 1040.0072
GLY 1050.0056
THR 1060.0092
GLU 1070.0052
GLU 1070.0052
VAL 1080.0035
VAL 1090.0112
VAL 1100.0099
LYS 1110.0166
ARG 1120.0129
THR 1130.0219
VAL 1140.0211
ALA 1150.0055
ALA 1160.0010
PRO 1170.0018
SER 1180.0039
SER 1180.0039
VAL 1190.0041
PHE 1200.0053
ILE 1210.0027
PHE 1220.0029
PRO 1230.0029
PRO 1240.0042
SER 1250.0034
ASP 1260.0040
GLU 1270.0036
GLN 1280.0037
LEU 1290.0082
LYS 1300.0098
SER 1310.0081
GLY 1320.0172
THR 1330.0091
ALA 1340.0079
SER 1350.0077
VAL 1360.0035
VAL 1370.0029
CYS 1380.0025
LEU 1390.0022
LEU 1400.0022
ASN 1410.0022
ASN 1420.0031
ASN 1420.0031
PHE 1430.0033
TYR 1440.0047
PRO 1450.0065
ARG 1460.0061
GLU 1470.0055
ALA 1480.0051
LYS 1490.0052
VAL 1500.0045
GLN 1510.0038
TRP 1520.0047
LYS 1530.0048
VAL 1540.0066
ASP 1550.0068
ASN 1560.0069
ALA 1570.0061
LEU 1580.0079
GLN 1590.0107
SER 1600.0063
GLY 1610.0070
ASN 1620.0057
SER 1630.0080
GLN 1640.0133
GLU 1650.0126
SER 1660.0125
SER 1660.0124
VAL 1670.0103
VAL 1670.0103
THR 1680.0108
GLU 1690.0079
GLU 1690.0080
GLN 1700.0085
ASP 1710.0122
SER 1720.0252
LYS 1730.0161
ASP 1740.0056
CYS 1750.0044
THR 1760.0035
TYR 1770.0035
SER 1780.0055
LEU 1790.0055
SER 1800.0065
SER 1810.0032
THR 1820.0034
LEU 1830.0017
THR 1840.0053
LEU 1850.0060
SER 1860.0088
LYS 1870.0141
ALA 1880.0140
ASP 1890.0090
TYR 1900.0071
GLU 1910.0095
LYS 1920.0075
HIS 1930.0043
LYS 1940.0046
LYS 1940.0046
VAL 1950.0046
TYR 1960.0039
ALA 1970.0022
CYS 1980.0018
CYS 1980.0018
GLU 1990.0079
VAL 2000.0048
THR 2010.0065
HIS 2020.0126
GLN 2030.0134
GLY 2040.0036
LEU 2050.0301
SER 2060.0275
SER 2070.0305
PRO 2080.0139
VAL 2090.0149
THR 2100.0191
LYS 2110.0098
SER 2120.0057
PHE 2130.0031
ASN 2140.0053
ARG 2150.0066
GLY 2160.0076
GLU 2170.0110
SER 20.0160
VAL 30.0057
GLU 40.0214
GLU 50.0175
SER 60.0228
GLY 70.0168
GLY 80.0054
ARG 90.0070
LEU 100.0124
VAL 110.0194
THR 120.0111
PRO 130.0026
GLY 140.0017
THR 150.0088
PRO 160.0120
LEU 170.0141
THR 180.0116
LEU 190.0054
THR 200.0131
CYS 210.0092
THR 220.0155
VAL 230.0165
SER 240.0392
GLY 250.0590
PHE 260.0131
SER 270.0081
LEU 280.0078
SER 290.0230
SER 290.0231
ASP 300.0166
TYR 310.0067
ALA 320.0017
MET 330.0008
SER 340.0012
TRP 350.0063
VAL 360.0103
ARG 370.0115
GLN 380.0205
ALA 390.0139
PRO 400.0153
GLY 410.0283
LYS 420.0168
GLY 430.0385
LEU 440.0121
GLU 450.0126
TRP 460.0096
ILE 470.0056
GLY 480.0035
ILE 490.0015
ILE 500.0032
TYR 510.0021
ALA 520.0024
SER 530.0024
GLY 540.0065
SER 550.0069
THR 560.0037
THR 560.0037
TYR 570.0026
TYR 580.0035
ALA 590.0112
SER 600.0143
TRP 610.0093
ALA 620.0054
LYS 630.0124
GLY 640.0150
ARG 650.0029
PHE 660.0039
THR 670.0059
ILE 680.0045
SER 690.0064
LYS 700.0070
THR 710.0049
SER 720.0108
THR 730.0053
THR 740.0076
VAL 750.0058
ASP 760.0064
LEU 770.0049
LYS 780.0104
ILE 790.0101
THR 800.0091
SER 810.0060
PRO 820.0088
THR 830.0282
THR 840.0343
GLU 850.0250
ASP 860.0041
THR 870.0098
ALA 880.0100
THR 890.0136
TYR 900.0119
PHE 910.0140
CYS 920.0058
CYS 920.0057
ALA 930.0047
ARG 940.0048
TYR 950.0065
TYR 960.0083
TYR 960.0084
ALA 970.0064
GLY 980.0084
SER 990.0076
ASP 1000.0086
ILE 1010.0080
ILE 1010.0080
TRP 1020.0040
GLY 1030.0044
PRO 1040.0246
GLY 1050.0201
THR 1060.0184
LEU 1070.0091
LEU 1070.0090
VAL 1080.0080
THR 1090.0116
VAL 1100.0134
SER 1110.0042
SER 1120.0191
ALA 1130.0125
SER 1140.0145
THR 1150.0141
LYS 1160.0082
GLY 1170.0076
PRO 1180.0103
SER 1190.0027
VAL 1200.0045
PHE 1210.0054
PRO 1220.0039
LEU 1230.0033
ALA 1240.0028
PRO 1250.0035
SER 1260.0024
GLY 1330.0152
THR 1340.0122
THR 1340.0121
ALA 1350.0144
ALA 1360.0050
LEU 1370.0032
GLY 1380.0054
CYS 1390.0050
CYS 1390.0050
LEU 1400.0023
VAL 1410.0019
LYS 1420.0089
ASP 1430.0069
TYR 1440.0068
PHE 1450.0093
PRO 1460.0098
GLU 1470.0106
GLU 1470.0106
PRO 1480.0082
VAL 1490.0098
THR 1500.0142
VAL 1510.0055
SER 1520.0060
TRP 1530.0061
ASN 1540.0139
SER 1550.0160
GLY 1560.0129
ALA 1570.0183
LEU 1580.0096
THR 1590.0061
SER 1600.0122
SER 1600.0123
GLY 1610.0111
VAL 1620.0076
HIS 1630.0069
THR 1640.0080
PHE 1650.0079
PRO 1660.0156
ALA 1670.0154
VAL 1680.0155
VAL 1680.0155
LEU 1690.0144
GLN 1700.0208
SER 1710.0233
SER 1720.0190
GLY 1730.0083
LEU 1740.0107
TYR 1750.0114
SER 1760.0112
SER 1760.0113
LEU 1770.0094
SER 1780.0044
SER 1780.0044
SER 1790.0045
VAL 1800.0047
VAL 1810.0068
THR 1820.0065
VAL 1830.0074
PRO 1840.0143
SER 1850.0169
SER 1850.0169
SER 1860.0151
SER 1870.0084
LEU 1880.0108
GLY 1890.0106
THR 1900.0130
GLN 1910.0065
GLN 1910.0066
THR 1920.0159
TYR 1930.0028
ILE 1940.0032
CYS 1950.0059
CYS 1950.0060
ASN 1960.0095
VAL 1970.0135
ASN 1980.0170
ASN 1980.0170
HIS 1990.0142
LYS 2000.0093
PRO 2010.0005
SER 2020.0104
ASN 2030.0201
THR 2040.0256
LYS 2050.0275
VAL 2060.0242
ASP 2070.0199
LYS 2080.0085
LYS 2090.0047
VAL 2100.0068
GLU 2110.0070
PRO 2120.0054
LYS 2130.0060
SER 2140.0163

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.