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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 102  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0414
ALA 10.0199
ASP 20.0132
VAL 30.0080
VAL 40.0129
MET 50.0087
THR 60.0090
GLN 70.0111
THR 80.0106
PRO 90.0099
SER 100.0177
SER 100.0178
SER 110.0104
VAL 120.0087
VAL 120.0086
SER 130.0128
SER 130.0127
ALA 140.0091
ALA 150.0057
VAL 160.0081
GLY 170.0085
GLY 180.0106
THR 190.0094
VAL 200.0057
THR 210.0039
THR 210.0040
ILE 220.0061
ASN 230.0072
CYS 240.0082
CYS 240.0081
GLN 250.0045
GLN 250.0042
ALA 260.0052
SER 270.0128
GLN 280.0036
SER 290.0026
ILE 300.0031
SER 310.0087
SER 310.0087
ALA 320.0092
TYR 330.0050
LEU 340.0048
ALA 350.0050
TRP 360.0064
TYR 370.0076
GLN 380.0079
GLN 390.0075
LYS 400.0106
PRO 410.0222
GLY 420.0223
GLN 430.0115
PRO 440.0100
PRO 450.0114
LYS 460.0096
LEU 470.0071
LEU 480.0061
ILE 490.0037
ILE 490.0037
TYR 500.0009
ASP 510.0033
ALA 520.0067
SER 530.0091
ASP 540.0053
LEU 550.0053
ALA 560.0100
SER 570.0149
SER 570.0149
GLY 580.0100
VAL 590.0046
SER 600.0101
SER 610.0136
ARG 620.0107
PHE 630.0063
LYS 640.0062
GLY 650.0080
SER 660.0109
GLY 670.0123
SER 680.0093
GLY 690.0067
THR 700.0050
GLN 710.0030
PHE 720.0088
THR 730.0088
LEU 740.0059
THR 750.0050
ILE 760.0044
SER 770.0088
SER 770.0088
ASP 780.0102
LEU 790.0058
GLU 800.0061
CYS 810.0073
ALA 820.0101
ASP 830.0041
ALA 840.0048
ALA 850.0065
THR 860.0072
TYR 870.0085
TYR 880.0062
CYS 890.0070
CYS 890.0070
GLN 900.0078
THR 910.0050
TYR 920.0037
TYR 930.0052
ALA 940.0191
ILE 950.0123
ILE 960.0179
THR 970.0163
TYR 980.0154
GLY 990.0156
ALA 1000.0044
ALA 1010.0054
PHE 1020.0060
GLY 1030.0084
GLY 1040.0083
GLY 1050.0104
THR 1060.0132
GLU 1070.0103
GLU 1070.0103
VAL 1080.0099
VAL 1090.0121
VAL 1100.0048
LYS 1110.0057
ARG 1120.0204
THR 1130.0177
VAL 1140.0063
ALA 1150.0083
ALA 1160.0096
PRO 1170.0143
SER 1180.0103
SER 1180.0103
VAL 1190.0082
PHE 1200.0059
ILE 1210.0023
PHE 1220.0033
PRO 1230.0040
PRO 1240.0170
SER 1250.0176
ASP 1260.0194
GLU 1270.0141
GLN 1280.0163
LEU 1290.0206
LYS 1300.0201
SER 1310.0113
GLY 1320.0280
THR 1330.0158
ALA 1340.0145
SER 1350.0133
VAL 1360.0032
VAL 1370.0029
CYS 1380.0030
LEU 1390.0065
LEU 1400.0074
ASN 1410.0080
ASN 1420.0076
ASN 1420.0076
PHE 1430.0064
TYR 1440.0068
PRO 1450.0178
ARG 1460.0186
GLU 1470.0202
ALA 1480.0276
LYS 1490.0262
VAL 1500.0186
GLN 1510.0120
TRP 1520.0120
LYS 1530.0147
VAL 1540.0086
ASP 1550.0088
ASN 1560.0107
ALA 1570.0057
LEU 1580.0112
GLN 1590.0142
SER 1600.0370
GLY 1610.0286
ASN 1620.0370
SER 1630.0187
GLN 1640.0101
GLU 1650.0078
SER 1660.0096
SER 1660.0095
VAL 1670.0106
VAL 1670.0106
THR 1680.0138
GLU 1690.0240
GLU 1690.0240
GLN 1700.0183
ASP 1710.0208
SER 1720.0255
LYS 1730.0286
ASP 1740.0298
CYS 1750.0057
THR 1760.0073
TYR 1770.0086
SER 1780.0107
LEU 1790.0093
SER 1800.0078
SER 1810.0066
THR 1820.0041
LEU 1830.0068
THR 1840.0081
LEU 1850.0091
SER 1860.0094
LYS 1870.0139
ALA 1880.0159
ASP 1890.0090
TYR 1900.0117
GLU 1910.0147
LYS 1920.0092
HIS 1930.0085
LYS 1940.0104
LYS 1940.0104
VAL 1950.0095
TYR 1960.0028
ALA 1970.0047
CYS 1980.0049
CYS 1980.0050
GLU 1990.0080
VAL 2000.0085
THR 2010.0124
HIS 2020.0038
GLN 2030.0180
GLY 2040.0241
LEU 2050.0283
SER 2060.0286
SER 2070.0414
PRO 2080.0130
VAL 2090.0096
THR 2100.0085
LYS 2110.0079
SER 2120.0079
PHE 2130.0066
ASN 2140.0131
ARG 2150.0178
GLY 2160.0195
GLU 2170.0258
SER 20.0039
VAL 30.0071
GLU 40.0143
GLU 50.0101
SER 60.0157
GLY 70.0149
GLY 80.0079
ARG 90.0068
LEU 100.0035
VAL 110.0030
THR 120.0053
PRO 130.0111
GLY 140.0093
THR 150.0077
PRO 160.0093
LEU 170.0067
THR 180.0058
LEU 190.0050
THR 200.0104
CYS 210.0087
THR 220.0121
VAL 230.0107
SER 240.0163
GLY 250.0207
PHE 260.0039
SER 270.0066
LEU 280.0089
SER 290.0198
SER 290.0199
ASP 300.0154
TYR 310.0095
ALA 320.0022
MET 330.0011
SER 340.0022
TRP 350.0049
VAL 360.0042
ARG 370.0034
GLN 380.0051
ALA 390.0039
PRO 400.0048
GLY 410.0107
LYS 420.0081
GLY 430.0145
LEU 440.0049
GLU 450.0042
TRP 460.0044
ILE 470.0035
GLY 480.0015
ILE 490.0039
ILE 500.0042
TYR 510.0036
ALA 520.0022
SER 530.0132
GLY 540.0074
SER 550.0055
THR 560.0048
THR 560.0049
TYR 570.0057
TYR 580.0034
ALA 590.0095
SER 600.0126
TRP 610.0107
ALA 620.0101
LYS 630.0071
GLY 640.0220
ARG 650.0127
PHE 660.0095
THR 670.0125
ILE 680.0050
SER 690.0037
LYS 700.0044
THR 710.0086
SER 720.0180
THR 730.0121
THR 740.0064
VAL 750.0055
ASP 760.0052
LEU 770.0017
LYS 780.0017
ILE 790.0021
THR 800.0035
SER 810.0025
PRO 820.0045
THR 830.0090
THR 840.0044
GLU 850.0098
ASP 860.0023
THR 870.0032
ALA 880.0035
THR 890.0014
TYR 900.0028
PHE 910.0040
CYS 920.0028
CYS 920.0027
ALA 930.0040
ARG 940.0047
TYR 950.0083
TYR 960.0082
TYR 960.0082
ALA 970.0068
GLY 980.0058
SER 990.0075
ASP 1000.0080
ILE 1010.0072
ILE 1010.0073
TRP 1020.0056
GLY 1030.0030
PRO 1040.0123
GLY 1050.0073
THR 1060.0070
LEU 1070.0032
LEU 1070.0033
VAL 1080.0036
THR 1090.0033
VAL 1100.0043
SER 1110.0064
SER 1120.0128
ALA 1130.0073
SER 1140.0066
THR 1150.0055
LYS 1160.0047
GLY 1170.0062
PRO 1180.0061
SER 1190.0093
VAL 1200.0092
PHE 1210.0060
PRO 1220.0053
LEU 1230.0039
ALA 1240.0061
PRO 1250.0141
SER 1260.0152
GLY 1330.0129
THR 1340.0058
THR 1340.0060
ALA 1350.0106
ALA 1360.0082
LEU 1370.0076
GLY 1380.0070
CYS 1390.0054
CYS 1390.0054
LEU 1400.0034
VAL 1410.0040
LYS 1420.0055
ASP 1430.0050
TYR 1440.0045
PHE 1450.0013
PRO 1460.0019
GLU 1470.0023
GLU 1470.0023
PRO 1480.0051
VAL 1490.0064
THR 1500.0093
VAL 1510.0094
SER 1520.0082
TRP 1530.0063
ASN 1540.0073
SER 1550.0116
GLY 1560.0073
ALA 1570.0273
LEU 1580.0160
THR 1590.0147
SER 1600.0078
SER 1600.0078
GLY 1610.0042
VAL 1620.0019
HIS 1630.0082
THR 1640.0085
PHE 1650.0077
PRO 1660.0105
ALA 1670.0093
VAL 1680.0074
VAL 1680.0074
LEU 1690.0089
GLN 1700.0112
SER 1710.0120
SER 1720.0105
GLY 1730.0080
LEU 1740.0068
TYR 1750.0056
SER 1760.0050
SER 1760.0050
LEU 1770.0044
SER 1780.0050
SER 1780.0050
SER 1790.0058
VAL 1800.0066
VAL 1810.0075
THR 1820.0076
VAL 1830.0099
PRO 1840.0121
SER 1850.0045
SER 1850.0045
SER 1860.0146
SER 1870.0111
LEU 1880.0095
GLY 1890.0171
THR 1900.0162
GLN 1910.0080
GLN 1910.0077
THR 1920.0292
TYR 1930.0020
ILE 1940.0022
CYS 1950.0045
CYS 1950.0046
ASN 1960.0047
VAL 1970.0080
ASN 1980.0111
ASN 1980.0112
HIS 1990.0088
LYS 2000.0084
PRO 2010.0074
SER 2020.0118
ASN 2030.0107
THR 2040.0080
LYS 2050.0074
VAL 2060.0046
ASP 2070.0079
LYS 2080.0159
LYS 2090.0171
VAL 2100.0123
GLU 2110.0164
PRO 2120.0135
LYS 2130.0081
SER 2140.0080

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.