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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 103  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0884
ALA 10.0273
ASP 20.0192
VAL 30.0164
VAL 40.0137
MET 50.0103
THR 60.0104
GLN 70.0135
THR 80.0134
PRO 90.0127
SER 100.0081
SER 100.0082
SER 110.0098
VAL 120.0064
VAL 120.0062
SER 130.0091
SER 130.0089
ALA 140.0117
ALA 150.0111
VAL 160.0104
GLY 170.0116
GLY 180.0114
THR 190.0061
VAL 200.0115
THR 210.0153
THR 210.0154
ILE 220.0156
ASN 230.0149
CYS 240.0146
CYS 240.0147
GLN 250.0136
GLN 250.0136
ALA 260.0069
SER 270.0119
GLN 280.0121
SER 290.0126
ILE 300.0116
SER 310.0115
SER 310.0115
ALA 320.0098
TYR 330.0056
LEU 340.0054
ALA 350.0073
TRP 360.0081
TYR 370.0023
GLN 380.0042
GLN 390.0051
LYS 400.0117
PRO 410.0100
GLY 420.0121
GLN 430.0145
PRO 440.0062
PRO 450.0084
LYS 460.0041
LEU 470.0044
LEU 480.0044
ILE 490.0084
ILE 490.0084
TYR 500.0116
ASP 510.0151
ALA 520.0080
SER 530.0189
ASP 540.0254
LEU 550.0083
ALA 560.0159
SER 570.0229
SER 570.0229
GLY 580.0143
VAL 590.0135
SER 600.0244
SER 610.0196
ARG 620.0145
PHE 630.0134
LYS 640.0150
GLY 650.0135
SER 660.0198
GLY 670.0091
SER 680.0059
GLY 690.0043
THR 700.0098
GLN 710.0137
PHE 720.0164
THR 730.0167
LEU 740.0155
THR 750.0159
ILE 760.0113
SER 770.0093
SER 770.0093
ASP 780.0098
LEU 790.0081
GLU 800.0088
CYS 810.0079
ALA 820.0051
ASP 830.0063
ALA 840.0081
ALA 850.0103
THR 860.0075
TYR 870.0072
TYR 880.0075
CYS 890.0079
CYS 890.0079
GLN 900.0083
THR 910.0016
TYR 920.0032
TYR 930.0064
ALA 940.0210
ILE 950.0108
ILE 960.0296
THR 970.0135
TYR 980.0154
GLY 990.0051
ALA 1000.0060
ALA 1010.0068
PHE 1020.0074
GLY 1030.0090
GLY 1040.0115
GLY 1050.0121
THR 1060.0099
GLU 1070.0114
GLU 1070.0113
VAL 1080.0079
VAL 1090.0098
VAL 1100.0059
LYS 1110.0146
ARG 1120.0132
THR 1130.0142
VAL 1140.0121
ALA 1150.0060
ALA 1160.0057
PRO 1170.0039
SER 1180.0032
SER 1180.0032
VAL 1190.0039
PHE 1200.0050
ILE 1210.0028
PHE 1220.0030
PRO 1230.0034
PRO 1240.0017
SER 1250.0028
ASP 1260.0035
GLU 1270.0026
GLN 1280.0028
LEU 1290.0029
LYS 1300.0017
SER 1310.0047
GLY 1320.0081
THR 1330.0050
ALA 1340.0038
SER 1350.0028
VAL 1360.0038
VAL 1370.0041
CYS 1380.0046
LEU 1390.0038
LEU 1400.0028
ASN 1410.0017
ASN 1420.0009
ASN 1420.0009
PHE 1430.0017
TYR 1440.0026
PRO 1450.0046
ARG 1460.0057
GLU 1470.0103
ALA 1480.0093
LYS 1490.0121
VAL 1500.0125
GLN 1510.0073
TRP 1520.0058
LYS 1530.0040
VAL 1540.0034
ASP 1550.0034
ASN 1560.0034
ALA 1570.0035
LEU 1580.0048
GLN 1590.0006
SER 1600.0100
GLY 1610.0154
ASN 1620.0143
SER 1630.0127
GLN 1640.0073
GLU 1650.0076
SER 1660.0059
SER 1660.0058
VAL 1670.0049
VAL 1670.0050
THR 1680.0021
GLU 1690.0068
GLU 1690.0067
GLN 1700.0048
ASP 1710.0048
SER 1720.0089
LYS 1730.0075
ASP 1740.0016
CYS 1750.0037
THR 1760.0021
TYR 1770.0013
SER 1780.0041
LEU 1790.0058
SER 1800.0069
SER 1810.0058
THR 1820.0062
LEU 1830.0069
THR 1840.0079
LEU 1850.0054
SER 1860.0038
LYS 1870.0052
ALA 1880.0050
ASP 1890.0039
TYR 1900.0042
GLU 1910.0043
LYS 1920.0035
HIS 1930.0054
LYS 1940.0055
LYS 1940.0055
VAL 1950.0054
TYR 1960.0026
ALA 1970.0016
CYS 1980.0025
CYS 1980.0024
GLU 1990.0022
VAL 2000.0020
THR 2010.0019
HIS 2020.0069
GLN 2030.0077
GLY 2040.0065
LEU 2050.0053
SER 2060.0088
SER 2070.0052
PRO 2080.0045
VAL 2090.0044
THR 2100.0042
LYS 2110.0050
SER 2120.0044
PHE 2130.0046
ASN 2140.0050
ARG 2150.0049
GLY 2160.0052
GLU 2170.0091
SER 20.0372
VAL 30.0132
GLU 40.0097
GLU 50.0128
SER 60.0142
GLY 70.0147
GLY 80.0009
ARG 90.0026
LEU 100.0051
VAL 110.0085
THR 120.0066
PRO 130.0062
GLY 140.0074
THR 150.0089
PRO 160.0091
LEU 170.0036
THR 180.0044
LEU 190.0091
THR 200.0253
CYS 210.0203
THR 220.0195
VAL 230.0240
SER 240.0560
GLY 250.0884
PHE 260.0039
SER 270.0040
LEU 280.0113
SER 290.0276
SER 290.0276
ASP 300.0268
TYR 310.0201
ALA 320.0101
MET 330.0106
SER 340.0109
TRP 350.0073
VAL 360.0055
ARG 370.0041
GLN 380.0083
ALA 390.0073
PRO 400.0209
GLY 410.0501
LYS 420.0220
GLY 430.0442
LEU 440.0079
GLU 450.0077
TRP 460.0058
ILE 470.0054
GLY 480.0091
ILE 490.0128
ILE 500.0116
TYR 510.0055
ALA 520.0146
SER 530.0297
GLY 540.0310
SER 550.0354
THR 560.0219
THR 560.0219
TYR 570.0219
TYR 580.0175
ALA 590.0122
SER 600.0180
TRP 610.0150
ALA 620.0119
LYS 630.0055
GLY 640.0145
ARG 650.0105
PHE 660.0116
THR 670.0133
ILE 680.0079
SER 690.0075
LYS 700.0105
THR 710.0303
SER 720.0281
THR 730.0278
THR 740.0230
VAL 750.0160
ASP 760.0182
LEU 770.0040
LYS 780.0045
ILE 790.0064
THR 800.0111
SER 810.0056
PRO 820.0058
THR 830.0081
THR 840.0147
GLU 850.0162
ASP 860.0071
THR 870.0100
ALA 880.0060
THR 890.0022
TYR 900.0041
PHE 910.0065
CYS 920.0123
CYS 920.0122
ALA 930.0099
ARG 940.0080
TYR 950.0052
TYR 960.0059
TYR 960.0058
ALA 970.0123
GLY 980.0054
SER 990.0032
ASP 1000.0008
ILE 1010.0085
ILE 1010.0085
TRP 1020.0075
GLY 1030.0060
PRO 1040.0090
GLY 1050.0070
THR 1060.0075
LEU 1070.0039
LEU 1070.0039
VAL 1080.0051
THR 1090.0083
VAL 1100.0094
SER 1110.0056
SER 1120.0052
ALA 1130.0072
SER 1140.0055
THR 1150.0033
LYS 1160.0014
GLY 1170.0017
PRO 1180.0022
SER 1190.0008
VAL 1200.0026
PHE 1210.0035
PRO 1220.0051
LEU 1230.0033
ALA 1240.0031
PRO 1250.0058
SER 1260.0071
GLY 1330.0049
THR 1340.0034
THR 1340.0034
ALA 1350.0040
ALA 1360.0021
LEU 1370.0017
GLY 1380.0038
CYS 1390.0040
CYS 1390.0040
LEU 1400.0018
VAL 1410.0005
LYS 1420.0043
ASP 1430.0028
TYR 1440.0018
PHE 1450.0008
PRO 1460.0026
GLU 1470.0043
GLU 1470.0042
PRO 1480.0034
VAL 1490.0034
THR 1500.0039
VAL 1510.0029
SER 1520.0030
TRP 1530.0036
ASN 1540.0042
SER 1550.0050
GLY 1560.0034
ALA 1570.0123
LEU 1580.0074
THR 1590.0062
SER 1600.0046
SER 1600.0046
GLY 1610.0061
VAL 1620.0041
HIS 1630.0022
THR 1640.0027
PHE 1650.0033
PRO 1660.0056
ALA 1670.0078
VAL 1680.0132
VAL 1680.0132
LEU 1690.0115
GLN 1700.0064
SER 1710.0018
SER 1720.0189
GLY 1730.0149
LEU 1740.0032
TYR 1750.0040
SER 1760.0046
SER 1760.0046
LEU 1770.0049
SER 1780.0033
SER 1780.0033
SER 1790.0034
VAL 1800.0038
VAL 1810.0032
THR 1820.0026
VAL 1830.0023
PRO 1840.0028
SER 1850.0053
SER 1850.0053
SER 1860.0084
SER 1870.0047
LEU 1880.0051
GLY 1890.0071
THR 1900.0117
GLN 1910.0069
GLN 1910.0068
THR 1920.0135
TYR 1930.0026
ILE 1940.0031
CYS 1950.0049
CYS 1950.0049
ASN 1960.0033
VAL 1970.0025
ASN 1980.0035
ASN 1980.0034
HIS 1990.0028
LYS 2000.0018
PRO 2010.0019
SER 2020.0030
ASN 2030.0051
THR 2040.0050
LYS 2050.0036
VAL 2060.0031
ASP 2070.0056
LYS 2080.0066
LYS 2090.0053
VAL 2100.0058
GLU 2110.0173
PRO 2120.0115
LYS 2130.0092
SER 2140.0099

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.