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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 105  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0972
ALA 10.0110
ASP 20.0076
VAL 30.0018
VAL 40.0059
MET 50.0051
THR 60.0094
GLN 70.0076
THR 80.0089
PRO 90.0106
SER 100.0157
SER 100.0157
SER 110.0108
VAL 120.0142
VAL 120.0141
SER 130.0089
SER 130.0084
ALA 140.0112
ALA 150.0202
VAL 160.0221
GLY 170.0160
GLY 180.0176
THR 190.0170
VAL 200.0161
THR 210.0179
THR 210.0179
ILE 220.0089
ASN 230.0054
CYS 240.0038
CYS 240.0039
GLN 250.0084
GLN 250.0082
ALA 260.0048
SER 270.0077
GLN 280.0099
SER 290.0077
ILE 300.0042
SER 310.0171
SER 310.0170
ALA 320.0119
TYR 330.0063
LEU 340.0030
ALA 350.0043
TRP 360.0049
TYR 370.0083
GLN 380.0106
GLN 390.0120
LYS 400.0205
PRO 410.0333
GLY 420.0363
GLN 430.0138
PRO 440.0119
PRO 450.0096
LYS 460.0164
LEU 470.0132
LEU 480.0134
ILE 490.0092
ILE 490.0092
TYR 500.0048
ASP 510.0027
ALA 520.0066
SER 530.0130
ASP 540.0090
LEU 550.0111
ALA 560.0183
SER 570.0181
SER 570.0181
GLY 580.0272
VAL 590.0182
SER 600.0209
SER 610.0115
ARG 620.0098
PHE 630.0101
LYS 640.0135
GLY 650.0113
SER 660.0115
GLY 670.0116
SER 680.0117
GLY 690.0130
THR 700.0069
GLN 710.0060
PHE 720.0037
THR 730.0089
LEU 740.0080
THR 750.0111
ILE 760.0125
SER 770.0106
SER 770.0106
ASP 780.0051
LEU 790.0021
GLU 800.0081
CYS 810.0104
ALA 820.0075
ASP 830.0072
ALA 840.0070
ALA 850.0145
THR 860.0114
TYR 870.0098
TYR 880.0096
CYS 890.0041
CYS 890.0040
GLN 900.0038
THR 910.0046
TYR 920.0042
TYR 930.0036
ALA 940.0080
ILE 950.0099
ILE 960.0176
THR 970.0220
TYR 980.0137
GLY 990.0105
ALA 1000.0052
ALA 1010.0047
PHE 1020.0049
GLY 1030.0060
GLY 1040.0155
GLY 1050.0128
THR 1060.0126
GLU 1070.0106
GLU 1070.0105
VAL 1080.0094
VAL 1090.0041
VAL 1100.0080
LYS 1110.0138
ARG 1120.0208
THR 1130.0205
VAL 1140.0176
ALA 1150.0075
ALA 1160.0073
PRO 1170.0074
SER 1180.0030
SER 1180.0030
VAL 1190.0027
PHE 1200.0030
ILE 1210.0034
PHE 1220.0026
PRO 1230.0039
PRO 1240.0040
SER 1250.0045
ASP 1260.0055
GLU 1270.0018
GLN 1280.0040
LEU 1290.0062
LYS 1300.0089
SER 1310.0114
GLY 1320.0162
THR 1330.0053
ALA 1340.0048
SER 1350.0055
VAL 1360.0041
VAL 1370.0042
CYS 1380.0041
LEU 1390.0017
LEU 1400.0023
ASN 1410.0027
ASN 1420.0036
ASN 1420.0036
PHE 1430.0017
TYR 1440.0023
PRO 1450.0065
ARG 1460.0063
GLU 1470.0091
ALA 1480.0072
LYS 1490.0088
VAL 1500.0092
GLN 1510.0091
TRP 1520.0075
LYS 1530.0065
VAL 1540.0049
ASP 1550.0040
ASN 1560.0046
ALA 1570.0027
LEU 1580.0080
GLN 1590.0027
SER 1600.0134
GLY 1610.0165
ASN 1620.0146
SER 1630.0087
GLN 1640.0063
GLU 1650.0071
SER 1660.0041
SER 1660.0041
VAL 1670.0049
VAL 1670.0049
THR 1680.0068
GLU 1690.0103
GLU 1690.0102
GLN 1700.0066
ASP 1710.0021
SER 1720.0116
LYS 1730.0107
ASP 1740.0058
CYS 1750.0058
THR 1760.0022
TYR 1770.0043
SER 1780.0045
LEU 1790.0040
SER 1800.0042
SER 1810.0054
THR 1820.0055
LEU 1830.0066
THR 1840.0055
LEU 1850.0042
SER 1860.0027
LYS 1870.0094
ALA 1880.0079
ASP 1890.0051
TYR 1900.0040
GLU 1910.0040
LYS 1920.0022
HIS 1930.0064
LYS 1940.0050
LYS 1940.0050
VAL 1950.0034
TYR 1960.0034
ALA 1970.0041
CYS 1980.0063
CYS 1980.0063
GLU 1990.0063
VAL 2000.0066
THR 2010.0073
HIS 2020.0075
GLN 2030.0042
GLY 2040.0111
LEU 2050.0180
SER 2060.0149
SER 2070.0184
PRO 2080.0105
VAL 2090.0039
THR 2100.0038
LYS 2110.0034
SER 2120.0038
PHE 2130.0041
ASN 2140.0032
ARG 2150.0036
GLY 2160.0037
GLU 2170.0117
SER 20.0085
VAL 30.0053
GLU 40.0052
GLU 50.0055
SER 60.0101
GLY 70.0145
GLY 80.0151
ARG 90.0099
LEU 100.0041
VAL 110.0073
THR 120.0059
PRO 130.0091
GLY 140.0134
THR 150.0170
PRO 160.0240
LEU 170.0138
THR 180.0128
LEU 190.0128
THR 200.0062
CYS 210.0054
THR 220.0063
VAL 230.0074
SER 240.0090
GLY 250.0107
PHE 260.0050
SER 270.0058
LEU 280.0098
SER 290.0183
SER 290.0182
ASP 300.0150
TYR 310.0129
ALA 320.0048
MET 330.0062
SER 340.0080
TRP 350.0059
VAL 360.0056
ARG 370.0054
GLN 380.0232
ALA 390.0145
PRO 400.0320
GLY 410.0738
LYS 420.0420
GLY 430.0972
LEU 440.0127
GLU 450.0098
TRP 460.0074
ILE 470.0109
GLY 480.0093
ILE 490.0092
ILE 500.0065
TYR 510.0039
ALA 520.0051
SER 530.0221
GLY 540.0185
SER 550.0150
THR 560.0082
THR 560.0082
TYR 570.0114
TYR 580.0148
ALA 590.0139
SER 600.0147
TRP 610.0168
ALA 620.0201
LYS 630.0218
GLY 640.0272
ARG 650.0136
PHE 660.0108
THR 670.0080
ILE 680.0022
SER 690.0017
LYS 700.0039
THR 710.0084
SER 720.0103
THR 730.0104
THR 740.0060
VAL 750.0048
ASP 760.0055
LEU 770.0123
LYS 780.0111
ILE 790.0091
THR 800.0110
SER 810.0097
PRO 820.0096
THR 830.0161
THR 840.0177
GLU 850.0234
ASP 860.0079
THR 870.0089
ALA 880.0120
THR 890.0098
TYR 900.0045
PHE 910.0036
CYS 920.0072
CYS 920.0071
ALA 930.0077
ARG 940.0089
TYR 950.0148
TYR 960.0087
TYR 960.0089
ALA 970.0095
GLY 980.0111
SER 990.0128
ASP 1000.0123
ILE 1010.0105
ILE 1010.0105
TRP 1020.0056
GLY 1030.0020
PRO 1040.0062
GLY 1050.0073
THR 1060.0093
LEU 1070.0077
LEU 1070.0077
VAL 1080.0056
THR 1090.0040
VAL 1100.0064
SER 1110.0152
SER 1120.0286
ALA 1130.0193
SER 1140.0255
THR 1150.0164
LYS 1160.0106
GLY 1170.0085
PRO 1180.0083
SER 1190.0021
VAL 1200.0019
PHE 1210.0032
PRO 1220.0055
LEU 1230.0030
ALA 1240.0039
PRO 1250.0056
SER 1260.0057
GLY 1330.0083
THR 1340.0080
THR 1340.0080
ALA 1350.0096
ALA 1360.0051
LEU 1370.0031
GLY 1380.0043
CYS 1390.0027
CYS 1390.0027
LEU 1400.0017
VAL 1410.0031
LYS 1420.0071
ASP 1430.0065
TYR 1440.0068
PHE 1450.0067
PRO 1460.0046
GLU 1470.0027
GLU 1470.0027
PRO 1480.0037
VAL 1490.0066
THR 1500.0095
VAL 1510.0038
SER 1520.0047
TRP 1530.0062
ASN 1540.0094
SER 1550.0165
GLY 1560.0136
ALA 1570.0101
LEU 1580.0090
THR 1590.0110
SER 1600.0103
SER 1600.0103
GLY 1610.0114
VAL 1620.0088
HIS 1630.0045
THR 1640.0042
PHE 1650.0031
PRO 1660.0084
ALA 1670.0095
VAL 1680.0080
VAL 1680.0080
LEU 1690.0062
GLN 1700.0135
SER 1710.0175
SER 1720.0113
GLY 1730.0065
LEU 1740.0103
TYR 1750.0075
SER 1760.0075
SER 1760.0076
LEU 1770.0065
SER 1780.0008
SER 1780.0008
SER 1790.0018
VAL 1800.0030
VAL 1810.0080
THR 1820.0067
VAL 1830.0061
PRO 1840.0096
SER 1850.0143
SER 1850.0143
SER 1860.0161
SER 1870.0092
LEU 1880.0101
GLY 1890.0119
THR 1900.0162
GLN 1910.0095
GLN 1910.0094
THR 1920.0185
TYR 1930.0011
ILE 1940.0027
CYS 1950.0041
CYS 1950.0041
ASN 1960.0036
VAL 1970.0066
ASN 1980.0102
ASN 1980.0102
HIS 1990.0079
LYS 2000.0038
PRO 2010.0020
SER 2020.0086
ASN 2030.0144
THR 2040.0160
LYS 2050.0139
VAL 2060.0108
ASP 2070.0096
LYS 2080.0061
LYS 2090.0048
VAL 2100.0066
GLU 2110.0189
PRO 2120.0158
LYS 2130.0151
SER 2140.0177

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.