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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 106  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0339
ALA 10.0220
ASP 20.0124
VAL 30.0087
VAL 40.0174
MET 50.0081
THR 60.0055
GLN 70.0036
THR 80.0060
PRO 90.0074
SER 100.0115
SER 100.0115
SER 110.0048
VAL 120.0022
VAL 120.0021
SER 130.0112
SER 130.0112
ALA 140.0104
ALA 150.0143
VAL 160.0091
GLY 170.0095
GLY 180.0102
THR 190.0128
VAL 200.0085
THR 210.0081
THR 210.0082
ILE 220.0035
ASN 230.0044
CYS 240.0054
CYS 240.0053
GLN 250.0062
GLN 250.0063
ALA 260.0090
SER 270.0147
GLN 280.0165
SER 290.0086
ILE 300.0045
SER 310.0102
SER 310.0102
ALA 320.0108
TYR 330.0067
LEU 340.0037
ALA 350.0032
TRP 360.0030
TYR 370.0032
GLN 380.0039
GLN 390.0028
LYS 400.0108
PRO 410.0124
GLY 420.0123
GLN 430.0096
PRO 440.0041
PRO 450.0064
LYS 460.0107
LEU 470.0068
LEU 480.0061
ILE 490.0047
ILE 490.0047
TYR 500.0028
ASP 510.0063
ALA 520.0067
SER 530.0091
ASP 540.0140
LEU 550.0111
ALA 560.0066
SER 570.0157
SER 570.0157
GLY 580.0150
VAL 590.0163
SER 600.0232
SER 610.0068
ARG 620.0064
PHE 630.0072
LYS 640.0091
GLY 650.0056
SER 660.0065
GLY 670.0167
SER 680.0168
GLY 690.0137
THR 700.0088
GLN 710.0101
PHE 720.0106
THR 730.0055
LEU 740.0042
THR 750.0084
ILE 760.0094
SER 770.0147
SER 770.0148
ASP 780.0169
LEU 790.0034
GLU 800.0084
CYS 810.0119
ALA 820.0080
ASP 830.0091
ALA 840.0087
ALA 850.0041
THR 860.0039
TYR 870.0037
TYR 880.0022
CYS 890.0019
CYS 890.0019
GLN 900.0013
THR 910.0020
TYR 920.0035
TYR 930.0061
ALA 940.0098
ILE 950.0111
ILE 960.0149
THR 970.0339
TYR 980.0158
GLY 990.0148
ALA 1000.0021
ALA 1010.0005
PHE 1020.0012
GLY 1030.0025
GLY 1040.0025
GLY 1050.0039
THR 1060.0076
GLU 1070.0061
GLU 1070.0061
VAL 1080.0044
VAL 1090.0128
VAL 1100.0137
LYS 1110.0166
ARG 1120.0090
THR 1130.0073
VAL 1140.0124
ALA 1150.0032
ALA 1160.0067
PRO 1170.0123
SER 1180.0129
SER 1180.0129
VAL 1190.0122
PHE 1200.0088
ILE 1210.0086
PHE 1220.0064
PRO 1230.0085
PRO 1240.0050
SER 1250.0133
ASP 1260.0188
GLU 1270.0117
GLN 1280.0087
LEU 1290.0077
LYS 1300.0150
SER 1310.0108
GLY 1320.0093
THR 1330.0022
ALA 1340.0023
SER 1350.0038
VAL 1360.0082
VAL 1370.0082
CYS 1380.0101
LEU 1390.0075
LEU 1400.0081
ASN 1410.0053
ASN 1420.0040
ASN 1420.0040
PHE 1430.0042
TYR 1440.0047
PRO 1450.0053
ARG 1460.0034
GLU 1470.0033
ALA 1480.0068
LYS 1490.0077
VAL 1500.0064
GLN 1510.0052
TRP 1520.0047
LYS 1530.0065
VAL 1540.0071
ASP 1550.0086
ASN 1560.0067
ALA 1570.0040
LEU 1580.0087
GLN 1590.0093
SER 1600.0151
GLY 1610.0133
ASN 1620.0140
SER 1630.0026
GLN 1640.0050
GLU 1650.0107
SER 1660.0105
SER 1660.0107
VAL 1670.0125
VAL 1670.0125
THR 1680.0150
GLU 1690.0185
GLU 1690.0185
GLN 1700.0074
ASP 1710.0111
SER 1720.0120
LYS 1730.0159
ASP 1740.0089
CYS 1750.0051
THR 1760.0020
TYR 1770.0045
SER 1780.0047
LEU 1790.0077
SER 1800.0078
SER 1810.0089
THR 1820.0063
LEU 1830.0058
THR 1840.0048
LEU 1850.0066
SER 1860.0085
LYS 1870.0123
ALA 1880.0131
ASP 1890.0135
TYR 1900.0079
GLU 1910.0042
LYS 1920.0094
HIS 1930.0129
LYS 1940.0114
LYS 1940.0114
VAL 1950.0090
TYR 1960.0033
ALA 1970.0071
CYS 1980.0121
CYS 1980.0120
GLU 1990.0054
VAL 2000.0064
THR 2010.0117
HIS 2020.0130
GLN 2030.0142
GLY 2040.0093
LEU 2050.0129
SER 2060.0167
SER 2070.0196
PRO 2080.0162
VAL 2090.0047
THR 2100.0111
LYS 2110.0171
SER 2120.0139
PHE 2130.0093
ASN 2140.0106
ARG 2150.0086
GLY 2160.0044
GLU 2170.0241
SER 20.0062
VAL 30.0048
GLU 40.0037
GLU 50.0031
SER 60.0052
GLY 70.0026
GLY 80.0119
ARG 90.0112
LEU 100.0096
VAL 110.0152
THR 120.0127
PRO 130.0081
GLY 140.0099
THR 150.0049
PRO 160.0108
LEU 170.0070
THR 180.0026
LEU 190.0032
THR 200.0107
CYS 210.0105
THR 220.0117
VAL 230.0093
SER 240.0068
GLY 250.0081
PHE 260.0077
SER 270.0045
LEU 280.0039
SER 290.0083
SER 290.0084
ASP 300.0100
TYR 310.0089
ALA 320.0011
MET 330.0019
SER 340.0020
TRP 350.0035
VAL 360.0032
ARG 370.0027
GLN 380.0083
ALA 390.0098
PRO 400.0091
GLY 410.0161
LYS 420.0108
GLY 430.0089
LEU 440.0032
GLU 450.0037
TRP 460.0041
ILE 470.0067
GLY 480.0064
ILE 490.0071
ILE 500.0071
TYR 510.0050
ALA 520.0041
SER 530.0115
GLY 540.0133
SER 550.0135
THR 560.0114
THR 560.0114
TYR 570.0135
TYR 580.0159
ALA 590.0090
SER 600.0099
TRP 610.0104
ALA 620.0130
LYS 630.0171
GLY 640.0188
ARG 650.0075
PHE 660.0075
THR 670.0074
ILE 680.0063
SER 690.0041
LYS 700.0046
THR 710.0094
SER 720.0069
THR 730.0109
THR 740.0134
VAL 750.0118
ASP 760.0103
LEU 770.0060
LYS 780.0032
ILE 790.0025
THR 800.0057
SER 810.0057
PRO 820.0064
THR 830.0083
THR 840.0115
GLU 850.0192
ASP 860.0088
THR 870.0089
ALA 880.0090
THR 890.0053
TYR 900.0034
PHE 910.0032
CYS 920.0065
CYS 920.0064
ALA 930.0067
ARG 940.0069
TYR 950.0078
TYR 960.0119
TYR 960.0118
ALA 970.0154
GLY 980.0073
SER 990.0082
ASP 1000.0085
ILE 1010.0094
ILE 1010.0094
TRP 1020.0071
GLY 1030.0053
PRO 1040.0067
GLY 1050.0060
THR 1060.0056
LEU 1070.0079
LEU 1070.0080
VAL 1080.0082
THR 1090.0065
VAL 1100.0089
SER 1110.0100
SER 1120.0214
ALA 1130.0122
SER 1140.0058
THR 1150.0109
LYS 1160.0123
GLY 1170.0098
PRO 1180.0096
SER 1190.0090
VAL 1200.0092
PHE 1210.0096
PRO 1220.0098
LEU 1230.0083
ALA 1240.0082
PRO 1250.0062
SER 1260.0099
GLY 1330.0335
THR 1340.0263
THR 1340.0260
ALA 1350.0334
ALA 1360.0062
LEU 1370.0067
GLY 1380.0067
CYS 1390.0081
CYS 1390.0081
LEU 1400.0061
VAL 1410.0048
LYS 1420.0072
ASP 1430.0093
TYR 1440.0104
PHE 1450.0109
PRO 1460.0090
GLU 1470.0101
GLU 1470.0102
PRO 1480.0093
VAL 1490.0075
THR 1500.0083
VAL 1510.0106
SER 1520.0119
TRP 1530.0107
ASN 1540.0092
SER 1550.0248
GLY 1560.0280
ALA 1570.0220
LEU 1580.0080
THR 1590.0075
SER 1600.0142
SER 1600.0141
GLY 1610.0157
VAL 1620.0181
HIS 1630.0092
THR 1640.0123
PHE 1650.0125
PRO 1660.0131
ALA 1670.0130
VAL 1680.0094
VAL 1680.0095
LEU 1690.0262
GLN 1700.0231
SER 1710.0250
SER 1720.0329
GLY 1730.0189
LEU 1740.0178
TYR 1750.0123
SER 1760.0083
SER 1760.0084
LEU 1770.0061
SER 1780.0088
SER 1780.0089
SER 1790.0086
VAL 1800.0059
VAL 1810.0135
THR 1820.0142
VAL 1830.0180
PRO 1840.0214
SER 1850.0216
SER 1850.0217
SER 1860.0160
SER 1870.0107
LEU 1880.0146
GLY 1890.0292
THR 1900.0284
GLN 1910.0284
GLN 1910.0284
THR 1920.0283
TYR 1930.0071
ILE 1940.0062
CYS 1950.0107
CYS 1950.0108
ASN 1960.0152
VAL 1970.0128
ASN 1980.0139
ASN 1980.0140
HIS 1990.0115
LYS 2000.0079
PRO 2010.0106
SER 2020.0169
ASN 2030.0108
THR 2040.0121
LYS 2050.0215
VAL 2060.0177
ASP 2070.0194
LYS 2080.0099
LYS 2090.0112
VAL 2100.0113
GLU 2110.0092
PRO 2120.0032
LYS 2130.0099
SER 2140.0221

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.