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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 11  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0231
ALA 10.0146
ASP 20.0119
VAL 30.0144
VAL 40.0158
MET 50.0158
THR 60.0186
GLN 70.0168
THR 80.0176
PRO 90.0181
SER 100.0170
SER 100.0170
SER 110.0162
VAL 120.0151
VAL 120.0151
SER 130.0122
SER 130.0122
ALA 140.0123
ALA 150.0121
VAL 160.0137
GLY 170.0159
GLY 180.0154
THR 190.0162
VAL 200.0157
THR 210.0149
THR 210.0149
ILE 220.0165
ASN 230.0168
CYS 240.0163
CYS 240.0162
GLN 250.0190
GLN 250.0188
ALA 260.0175
SER 270.0194
GLN 280.0202
SER 290.0195
ILE 300.0156
SER 310.0165
SER 310.0165
ALA 320.0137
TYR 330.0108
LEU 340.0106
ALA 350.0094
TRP 360.0113
TYR 370.0110
GLN 380.0128
GLN 390.0130
LYS 400.0127
PRO 410.0120
GLY 420.0112
GLN 430.0128
PRO 440.0112
PRO 450.0107
LYS 460.0105
LEU 470.0091
LEU 480.0112
ILE 490.0102
ILE 490.0101
TYR 500.0079
ASP 510.0093
ALA 520.0118
SER 530.0119
ASP 540.0095
LEU 550.0108
ALA 560.0096
SER 570.0105
SER 570.0105
GLY 580.0137
VAL 590.0139
SER 600.0163
SER 610.0164
ARG 620.0169
PHE 630.0154
LYS 640.0143
GLY 650.0137
SER 660.0147
GLY 670.0173
SER 680.0171
GLY 690.0190
THR 700.0193
GLN 710.0194
PHE 720.0168
THR 730.0156
LEU 740.0149
THR 750.0157
ILE 760.0157
SER 770.0169
SER 770.0169
ASP 780.0177
LEU 790.0148
GLU 800.0144
CYS 810.0128
ALA 820.0140
ASP 830.0138
ALA 840.0121
ALA 850.0144
THR 860.0141
TYR 870.0138
TYR 880.0132
CYS 890.0123
CYS 890.0124
GLN 900.0100
THR 910.0105
TYR 920.0080
TYR 930.0114
ALA 940.0124
ILE 950.0078
ILE 960.0091
THR 970.0120
TYR 980.0112
GLY 990.0070
ALA 1000.0065
ALA 1010.0089
PHE 1020.0107
GLY 1030.0141
GLY 1040.0154
GLY 1050.0154
THR 1060.0148
GLU 1070.0148
GLU 1070.0148
VAL 1080.0144
VAL 1090.0108
VAL 1100.0107
LYS 1110.0095
ARG 1120.0060
THR 1130.0050
VAL 1140.0050
ALA 1150.0062
ALA 1160.0072
PRO 1170.0080
SER 1180.0079
SER 1180.0079
VAL 1190.0071
PHE 1200.0066
ILE 1210.0066
PHE 1220.0067
PRO 1230.0061
PRO 1240.0067
SER 1250.0078
ASP 1260.0082
GLU 1270.0079
GLN 1280.0066
LEU 1290.0070
LYS 1300.0071
SER 1310.0068
GLY 1320.0078
THR 1330.0067
ALA 1340.0061
SER 1350.0063
VAL 1360.0062
VAL 1370.0071
CYS 1380.0073
LEU 1390.0081
LEU 1400.0081
ASN 1410.0082
ASN 1420.0068
ASN 1420.0068
PHE 1430.0063
TYR 1440.0057
PRO 1450.0053
ARG 1460.0062
GLU 1470.0071
ALA 1480.0076
LYS 1490.0080
VAL 1500.0083
GLN 1510.0078
TRP 1520.0073
LYS 1530.0076
VAL 1540.0089
ASP 1550.0107
ASN 1560.0099
ALA 1570.0105
LEU 1580.0100
GLN 1590.0100
SER 1600.0108
GLY 1610.0118
ASN 1620.0098
SER 1630.0071
GLN 1640.0081
GLU 1650.0088
SER 1660.0103
SER 1660.0102
VAL 1670.0088
VAL 1670.0087
THR 1680.0080
GLU 1690.0049
GLU 1690.0050
GLN 1700.0060
ASP 1710.0077
SER 1720.0120
LYS 1730.0083
ASP 1740.0073
CYS 1750.0058
THR 1760.0058
TYR 1770.0064
SER 1780.0083
LEU 1790.0088
SER 1800.0093
SER 1810.0084
THR 1820.0079
LEU 1830.0073
THR 1840.0074
LEU 1850.0080
SER 1860.0090
LYS 1870.0088
ALA 1880.0114
ASP 1890.0114
TYR 1900.0094
GLU 1910.0111
LYS 1920.0131
HIS 1930.0117
LYS 1940.0112
LYS 1940.0112
VAL 1950.0096
TYR 1960.0071
ALA 1970.0066
CYS 1980.0066
CYS 1980.0066
GLU 1990.0073
VAL 2000.0076
THR 2010.0079
HIS 2020.0080
GLN 2030.0071
GLY 2040.0070
LEU 2050.0086
SER 2060.0090
SER 2070.0089
PRO 2080.0078
VAL 2090.0077
THR 2100.0070
LYS 2110.0072
SER 2120.0066
PHE 2130.0072
ASN 2140.0103
ARG 2150.0102
GLY 2160.0121
GLU 2170.0134
SER 20.0116
VAL 30.0122
GLU 40.0148
GLU 50.0137
SER 60.0155
GLY 70.0151
GLY 80.0118
ARG 90.0114
LEU 100.0122
VAL 110.0167
THR 120.0199
PRO 130.0222
GLY 140.0223
THR 150.0211
PRO 160.0192
LEU 170.0166
THR 180.0150
LEU 190.0136
THR 200.0152
CYS 210.0137
THR 220.0160
VAL 230.0146
SER 240.0155
GLY 250.0139
PHE 260.0127
SER 270.0150
LEU 280.0141
SER 290.0170
SER 290.0171
ASP 300.0137
TYR 310.0092
ALA 320.0069
MET 330.0060
SER 340.0045
TRP 350.0073
VAL 360.0081
ARG 370.0112
GLN 380.0116
ALA 390.0128
PRO 400.0147
GLY 410.0161
LYS 420.0127
GLY 430.0115
LEU 440.0107
GLU 450.0086
TRP 460.0055
ILE 470.0061
GLY 480.0036
ILE 490.0043
ILE 500.0084
TYR 510.0102
ALA 520.0137
SER 530.0174
GLY 540.0154
SER 550.0124
THR 560.0084
THR 560.0084
TYR 570.0043
TYR 580.0020
ALA 590.0030
SER 600.0040
TRP 610.0080
ALA 620.0080
LYS 630.0064
GLY 640.0109
ARG 650.0130
PHE 660.0122
THR 670.0123
ILE 680.0108
SER 690.0140
LYS 700.0162
THR 710.0199
SER 720.0206
THR 730.0188
THR 740.0167
VAL 750.0135
ASP 760.0141
LEU 770.0125
LYS 780.0148
ILE 790.0154
THR 800.0175
SER 810.0198
PRO 820.0191
THR 830.0203
THR 840.0199
GLU 850.0177
ASP 860.0163
THR 870.0153
ALA 880.0135
THR 890.0130
TYR 900.0117
PHE 910.0103
CYS 920.0088
CYS 920.0088
ALA 930.0059
ARG 940.0041
TYR 950.0015
TYR 960.0030
TYR 960.0030
ALA 970.0047
GLY 980.0045
SER 990.0035
ASP 1000.0040
ILE 1010.0058
ILE 1010.0058
TRP 1020.0084
GLY 1030.0115
PRO 1040.0135
GLY 1050.0128
THR 1060.0137
LEU 1070.0113
LEU 1070.0113
VAL 1080.0133
THR 1090.0139
VAL 1100.0175
SER 1110.0186
SER 1120.0196
ALA 1130.0104
SER 1140.0058
THR 1150.0045
LYS 1160.0061
GLY 1170.0068
PRO 1180.0081
SER 1190.0079
VAL 1200.0086
PHE 1210.0084
PRO 1220.0087
LEU 1230.0085
ALA 1240.0095
PRO 1250.0100
SER 1260.0090
GLY 1330.0128
THR 1340.0117
THR 1340.0118
ALA 1350.0102
ALA 1360.0097
LEU 1370.0098
GLY 1380.0101
CYS 1390.0100
CYS 1390.0100
LEU 1400.0090
VAL 1410.0091
LYS 1420.0082
ASP 1430.0076
TYR 1440.0079
PHE 1450.0084
PRO 1460.0076
GLU 1470.0081
GLU 1470.0082
PRO 1480.0093
VAL 1490.0097
THR 1500.0114
VAL 1510.0138
SER 1520.0156
TRP 1530.0157
ASN 1540.0184
SER 1550.0198
GLY 1560.0211
ALA 1570.0221
LEU 1580.0190
THR 1590.0190
SER 1600.0140
SER 1600.0140
GLY 1610.0118
VAL 1620.0132
HIS 1630.0102
THR 1640.0113
PHE 1650.0112
PRO 1660.0107
ALA 1670.0105
VAL 1680.0100
VAL 1680.0100
LEU 1690.0082
GLN 1700.0084
SER 1710.0082
SER 1720.0081
GLY 1730.0078
LEU 1740.0078
TYR 1750.0080
SER 1760.0092
SER 1760.0092
LEU 1770.0106
SER 1780.0101
SER 1780.0101
SER 1790.0110
VAL 1800.0104
VAL 1810.0117
THR 1820.0115
VAL 1830.0136
PRO 1840.0167
SER 1850.0148
SER 1850.0148
SER 1860.0190
SER 1870.0193
LEU 1880.0167
GLY 1890.0198
THR 1900.0231
GLN 1910.0212
GLN 1910.0212
THR 1920.0186
TYR 1930.0155
ILE 1940.0144
CYS 1950.0133
CYS 1950.0132
ASN 1960.0127
VAL 1970.0110
ASN 1980.0105
ASN 1980.0105
HIS 1990.0081
LYS 2000.0071
PRO 2010.0062
SER 2020.0056
ASN 2030.0058
THR 2040.0070
LYS 2050.0094
VAL 2060.0098
ASP 2070.0115
LYS 2080.0118
LYS 2090.0133
VAL 2100.0122
GLU 2110.0134
PRO 2120.0131
LYS 2130.0123
SER 2140.0153

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.