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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 12  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0424
ALA 10.0254
ASP 20.0185
VAL 30.0138
VAL 40.0109
MET 50.0060
THR 60.0092
GLN 70.0117
THR 80.0163
PRO 90.0199
SER 100.0193
SER 100.0193
SER 110.0201
VAL 120.0213
VAL 120.0213
SER 130.0208
SER 130.0207
ALA 140.0211
ALA 150.0195
VAL 160.0157
GLY 170.0203
GLY 180.0228
THR 190.0226
VAL 200.0207
THR 210.0195
THR 210.0196
ILE 220.0165
ASN 230.0135
CYS 240.0089
CYS 240.0088
GLN 250.0037
GLN 250.0037
ALA 260.0038
SER 270.0098
GLN 280.0136
SER 290.0142
ILE 300.0131
SER 310.0166
SER 310.0166
ALA 320.0160
TYR 330.0125
LEU 340.0075
ALA 350.0080
TRP 360.0101
TYR 370.0096
GLN 380.0121
GLN 390.0123
LYS 400.0107
PRO 410.0107
GLY 420.0106
GLN 430.0133
PRO 440.0112
PRO 450.0099
LYS 460.0124
LEU 470.0115
LEU 480.0142
ILE 490.0145
ILE 490.0146
TYR 500.0131
ASP 510.0138
ALA 520.0128
SER 530.0170
ASP 540.0191
LEU 550.0187
ALA 560.0198
SER 570.0247
SER 570.0247
GLY 580.0266
VAL 590.0223
SER 600.0214
SER 610.0183
ARG 620.0186
PHE 630.0161
LYS 640.0175
GLY 650.0143
SER 660.0136
GLY 670.0137
SER 680.0127
GLY 690.0109
THR 700.0053
GLN 710.0063
PHE 720.0100
THR 730.0134
LEU 740.0146
THR 750.0182
ILE 760.0178
SER 770.0202
SER 770.0202
ASP 780.0209
LEU 790.0172
GLU 800.0134
CYS 810.0106
ALA 820.0095
ASP 830.0116
ALA 840.0120
ALA 850.0142
THR 860.0134
TYR 870.0123
TYR 880.0088
CYS 890.0061
CYS 890.0060
GLN 900.0026
THR 910.0050
TYR 920.0087
TYR 930.0140
ALA 940.0188
ILE 950.0140
ILE 960.0184
THR 970.0231
TYR 980.0180
GLY 990.0130
ALA 1000.0065
ALA 1010.0058
PHE 1020.0043
GLY 1030.0069
GLY 1040.0110
GLY 1050.0125
THR 1060.0160
GLU 1070.0161
GLU 1070.0161
VAL 1080.0168
VAL 1090.0148
VAL 1100.0133
LYS 1110.0144
ARG 1120.0027
THR 1130.0020
VAL 1140.0038
ALA 1150.0060
ALA 1160.0061
PRO 1170.0065
SER 1180.0074
SER 1180.0074
VAL 1190.0071
PHE 1200.0066
ILE 1210.0064
PHE 1220.0062
PRO 1230.0069
PRO 1240.0077
SER 1250.0100
ASP 1260.0128
GLU 1270.0125
GLN 1280.0098
LEU 1290.0106
LYS 1300.0138
SER 1310.0116
GLY 1320.0094
THR 1330.0072
ALA 1340.0069
SER 1350.0067
VAL 1360.0057
VAL 1370.0063
CYS 1380.0070
LEU 1390.0070
LEU 1400.0072
ASN 1410.0074
ASN 1420.0065
ASN 1420.0065
PHE 1430.0057
TYR 1440.0044
PRO 1450.0054
ARG 1460.0060
GLU 1470.0049
ALA 1480.0084
LYS 1490.0083
VAL 1500.0081
GLN 1510.0138
TRP 1520.0118
LYS 1530.0137
VAL 1540.0153
ASP 1550.0192
ASN 1560.0209
ALA 1570.0213
LEU 1580.0202
GLN 1590.0173
SER 1600.0170
GLY 1610.0155
ASN 1620.0107
SER 1630.0079
GLN 1640.0086
GLU 1650.0087
SER 1660.0082
SER 1660.0082
VAL 1670.0079
VAL 1670.0079
THR 1680.0082
GLU 1690.0069
GLU 1690.0068
GLN 1700.0050
ASP 1710.0031
SER 1720.0027
LYS 1730.0029
ASP 1740.0033
CYS 1750.0022
THR 1760.0042
TYR 1770.0064
SER 1780.0078
LEU 1790.0077
SER 1800.0073
SER 1810.0085
THR 1820.0074
LEU 1830.0069
THR 1840.0079
LEU 1850.0074
SER 1860.0069
LYS 1870.0084
ALA 1880.0088
ASP 1890.0099
TYR 1900.0098
GLU 1910.0125
LYS 1920.0152
HIS 1930.0164
LYS 1940.0178
LYS 1940.0178
VAL 1950.0167
TYR 1960.0103
ALA 1970.0103
CYS 1980.0096
CYS 1980.0097
GLU 1990.0074
VAL 2000.0078
THR 2010.0090
HIS 2020.0059
GLN 2030.0058
GLY 2040.0056
LEU 2050.0074
SER 2060.0079
SER 2070.0078
PRO 2080.0086
VAL 2090.0070
THR 2100.0070
LYS 2110.0081
SER 2120.0093
PHE 2130.0101
ASN 2140.0171
ARG 2150.0154
GLY 2160.0189
GLU 2170.0218
SER 20.0135
VAL 30.0121
GLU 40.0154
GLU 50.0146
SER 60.0180
GLY 70.0198
GLY 80.0148
ARG 90.0130
LEU 100.0089
VAL 110.0126
THR 120.0115
PRO 130.0108
GLY 140.0160
THR 150.0179
PRO 160.0190
LEU 170.0180
THR 180.0185
LEU 190.0169
THR 200.0167
CYS 210.0130
THR 220.0140
VAL 230.0113
SER 240.0138
GLY 250.0144
PHE 260.0098
SER 270.0052
LEU 280.0007
SER 290.0044
SER 290.0044
ASP 300.0075
TYR 310.0057
ALA 320.0041
MET 330.0014
SER 340.0036
TRP 350.0077
VAL 360.0071
ARG 370.0093
GLN 380.0100
ALA 390.0110
PRO 400.0119
GLY 410.0173
LYS 420.0153
GLY 430.0118
LEU 440.0079
GLU 450.0077
TRP 460.0060
ILE 470.0090
GLY 480.0082
ILE 490.0061
ILE 500.0073
TYR 510.0075
ALA 520.0062
SER 530.0112
GLY 540.0113
SER 550.0138
THR 560.0120
THR 560.0120
TYR 570.0127
TYR 580.0131
ALA 590.0116
SER 600.0156
TRP 610.0166
ALA 620.0153
LYS 630.0163
GLY 640.0184
ARG 650.0174
PHE 660.0154
THR 670.0152
ILE 680.0133
SER 690.0133
LYS 700.0106
THR 710.0123
SER 720.0085
THR 730.0098
THR 740.0120
VAL 750.0108
ASP 760.0146
LEU 770.0149
LYS 780.0172
ILE 790.0159
THR 800.0173
SER 810.0166
PRO 820.0134
THR 830.0106
THR 840.0092
GLU 850.0089
ASP 860.0094
THR 870.0098
ALA 880.0094
THR 890.0117
TYR 900.0106
PHE 910.0093
CYS 920.0081
CYS 920.0081
ALA 930.0050
ARG 940.0042
TYR 950.0059
TYR 960.0116
TYR 960.0116
ALA 970.0132
GLY 980.0087
SER 990.0066
ASP 1000.0107
ILE 1010.0097
ILE 1010.0097
TRP 1020.0098
GLY 1030.0130
PRO 1040.0130
GLY 1050.0124
THR 1060.0150
LEU 1070.0106
LEU 1070.0106
VAL 1080.0096
THR 1090.0077
VAL 1100.0082
SER 1110.0050
SER 1120.0037
ALA 1130.0060
SER 1140.0062
THR 1150.0059
LYS 1160.0076
GLY 1170.0073
PRO 1180.0069
SER 1190.0076
VAL 1200.0071
PHE 1210.0068
PRO 1220.0072
LEU 1230.0065
ALA 1240.0068
PRO 1250.0073
SER 1260.0078
GLY 1330.0096
THR 1340.0085
THR 1340.0084
ALA 1350.0080
ALA 1360.0071
LEU 1370.0069
GLY 1380.0069
CYS 1390.0068
CYS 1390.0068
LEU 1400.0068
VAL 1410.0075
LYS 1420.0078
ASP 1430.0077
TYR 1440.0076
PHE 1450.0073
PRO 1460.0067
GLU 1470.0076
GLU 1470.0076
PRO 1480.0068
VAL 1490.0066
THR 1500.0065
VAL 1510.0089
SER 1520.0091
TRP 1530.0084
ASN 1540.0094
SER 1550.0107
GLY 1560.0114
ALA 1570.0109
LEU 1580.0096
THR 1590.0103
SER 1600.0089
SER 1600.0089
GLY 1610.0086
VAL 1620.0087
HIS 1630.0083
THR 1640.0087
PHE 1650.0087
PRO 1660.0094
ALA 1670.0090
VAL 1680.0089
VAL 1680.0089
LEU 1690.0088
GLN 1700.0086
SER 1710.0085
SER 1720.0083
GLY 1730.0081
LEU 1740.0083
TYR 1750.0085
SER 1760.0083
SER 1760.0083
LEU 1770.0082
SER 1780.0079
SER 1780.0079
SER 1790.0080
VAL 1800.0074
VAL 1810.0076
THR 1820.0075
VAL 1830.0074
PRO 1840.0081
SER 1850.0086
SER 1850.0086
SER 1860.0085
SER 1870.0074
LEU 1880.0077
GLY 1890.0082
THR 1900.0078
GLN 1910.0078
GLN 1910.0078
THR 1920.0082
TYR 1930.0073
ILE 1940.0078
CYS 1950.0080
CYS 1950.0080
ASN 1960.0071
VAL 1970.0069
ASN 1980.0073
ASN 1980.0073
HIS 1990.0061
LYS 2000.0072
PRO 2010.0075
SER 2020.0073
ASN 2030.0074
THR 2040.0064
LYS 2050.0072
VAL 2060.0066
ASP 2070.0067
LYS 2080.0082
LYS 2090.0079
VAL 2100.0067
GLU 2110.0077
PRO 2120.0097
LYS 2130.0130
SER 2140.0424

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.