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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 13  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0373
ALA 10.0091
ASP 20.0098
VAL 30.0098
VAL 40.0185
MET 50.0161
THR 60.0207
GLN 70.0201
THR 80.0237
PRO 90.0254
SER 100.0269
SER 100.0270
SER 110.0215
VAL 120.0178
VAL 120.0175
SER 130.0151
SER 130.0149
ALA 140.0168
ALA 150.0174
VAL 160.0170
GLY 170.0232
GLY 180.0221
THR 190.0191
VAL 200.0154
THR 210.0163
THR 210.0167
ILE 220.0134
ASN 230.0165
CYS 240.0154
CYS 240.0150
GLN 250.0177
GLN 250.0174
ALA 260.0145
SER 270.0182
GLN 280.0126
SER 290.0098
ILE 300.0058
SER 310.0068
SER 310.0068
ALA 320.0054
TYR 330.0018
LEU 340.0033
ALA 350.0056
TRP 360.0058
TYR 370.0125
GLN 380.0142
GLN 390.0195
LYS 400.0207
PRO 410.0251
GLY 420.0315
GLN 430.0259
PRO 440.0234
PRO 450.0213
LYS 460.0196
LEU 470.0148
LEU 480.0098
ILE 490.0064
ILE 490.0064
TYR 500.0052
ASP 510.0021
ALA 520.0049
SER 530.0092
ASP 540.0116
LEU 550.0161
ALA 560.0193
SER 570.0276
SER 570.0276
GLY 580.0310
VAL 590.0221
SER 600.0225
SER 610.0234
ARG 620.0198
PHE 630.0122
LYS 640.0131
GLY 650.0093
SER 660.0140
GLY 670.0140
SER 680.0127
GLY 690.0130
THR 700.0155
GLN 710.0165
PHE 720.0125
THR 730.0132
LEU 740.0078
THR 750.0124
ILE 760.0114
SER 770.0190
SER 770.0191
ASP 780.0218
LEU 790.0142
GLU 800.0139
CYS 810.0098
ALA 820.0138
ASP 830.0080
ALA 840.0065
ALA 850.0140
THR 860.0156
TYR 870.0120
TYR 880.0133
CYS 890.0093
CYS 890.0093
GLN 900.0103
THR 910.0082
TYR 920.0074
TYR 930.0053
ALA 940.0058
ILE 950.0066
ILE 960.0053
THR 970.0074
TYR 980.0075
GLY 990.0086
ALA 1000.0112
ALA 1010.0134
PHE 1020.0141
GLY 1030.0158
GLY 1040.0209
GLY 1050.0175
THR 1060.0169
GLU 1070.0153
GLU 1070.0153
VAL 1080.0085
VAL 1090.0075
VAL 1100.0056
LYS 1110.0108
ARG 1120.0101
THR 1130.0113
VAL 1140.0095
ALA 1150.0069
ALA 1160.0058
PRO 1170.0036
SER 1180.0021
SER 1180.0021
VAL 1190.0013
PHE 1200.0009
ILE 1210.0010
PHE 1220.0010
PRO 1230.0012
PRO 1240.0015
SER 1250.0015
ASP 1260.0013
GLU 1270.0022
GLN 1280.0021
LEU 1290.0021
LYS 1300.0027
SER 1310.0026
GLY 1320.0027
THR 1330.0023
ALA 1340.0020
SER 1350.0019
VAL 1360.0014
VAL 1370.0013
CYS 1380.0011
LEU 1390.0010
LEU 1400.0016
ASN 1410.0020
ASN 1420.0031
ASN 1420.0030
PHE 1430.0038
TYR 1440.0049
PRO 1450.0049
ARG 1460.0033
GLU 1470.0052
ALA 1480.0042
LYS 1490.0042
VAL 1500.0029
GLN 1510.0028
TRP 1520.0024
LYS 1530.0027
VAL 1540.0025
ASP 1550.0029
ASN 1560.0031
ALA 1570.0032
LEU 1580.0030
GLN 1590.0025
SER 1600.0018
GLY 1610.0019
ASN 1620.0020
SER 1630.0023
GLN 1640.0023
GLU 1650.0017
SER 1660.0017
SER 1660.0018
VAL 1670.0017
VAL 1670.0018
THR 1680.0017
GLU 1690.0083
GLU 1690.0084
GLN 1700.0042
ASP 1710.0072
SER 1720.0123
LYS 1730.0132
ASP 1740.0100
CYS 1750.0052
THR 1760.0035
TYR 1770.0008
SER 1780.0008
LEU 1790.0009
SER 1800.0010
SER 1810.0013
THR 1820.0015
LEU 1830.0017
THR 1840.0022
LEU 1850.0023
SER 1860.0027
LYS 1870.0027
ALA 1880.0032
ASP 1890.0028
TYR 1900.0025
GLU 1910.0030
LYS 1920.0029
HIS 1930.0027
LYS 1940.0029
LYS 1940.0029
VAL 1950.0027
TYR 1960.0023
ALA 1970.0022
CYS 1980.0020
CYS 1980.0020
GLU 1990.0031
VAL 2000.0037
THR 2010.0051
HIS 2020.0063
GLN 2030.0083
GLY 2040.0079
LEU 2050.0070
SER 2060.0087
SER 2070.0076
PRO 2080.0053
VAL 2090.0040
THR 2100.0030
LYS 2110.0020
SER 2120.0020
PHE 2130.0020
ASN 2140.0028
ARG 2150.0030
GLY 2160.0035
GLU 2170.0037
SER 20.0213
VAL 30.0162
GLU 40.0149
GLU 50.0096
SER 60.0063
GLY 70.0017
GLY 80.0028
ARG 90.0054
LEU 100.0103
VAL 110.0182
THR 120.0264
PRO 130.0304
GLY 140.0312
THR 150.0271
PRO 160.0217
LEU 170.0128
THR 180.0088
LEU 190.0036
THR 200.0047
CYS 210.0080
THR 220.0134
VAL 230.0161
SER 240.0218
GLY 250.0254
PHE 260.0197
SER 270.0178
LEU 280.0136
SER 290.0142
SER 290.0142
ASP 300.0144
TYR 310.0105
ALA 320.0067
MET 330.0068
SER 340.0067
TRP 350.0086
VAL 360.0135
ARG 370.0154
GLN 380.0200
ALA 390.0221
PRO 400.0254
GLY 410.0373
LYS 420.0310
GLY 430.0244
LEU 440.0201
GLU 450.0168
TRP 460.0131
ILE 470.0100
GLY 480.0063
ILE 490.0039
ILE 500.0031
TYR 510.0063
ALA 520.0113
SER 530.0128
GLY 540.0100
SER 550.0078
THR 560.0042
THR 560.0043
TYR 570.0036
TYR 580.0068
ALA 590.0092
SER 600.0127
TRP 610.0171
ALA 620.0129
LYS 630.0127
GLY 640.0174
ARG 650.0171
PHE 660.0116
THR 670.0098
ILE 680.0047
SER 690.0075
LYS 700.0097
THR 710.0150
SER 720.0184
THR 730.0168
THR 740.0120
VAL 750.0070
ASP 760.0042
LEU 770.0036
LYS 780.0097
ILE 790.0132
THR 800.0191
SER 810.0256
PRO 820.0236
THR 830.0297
THR 840.0288
GLU 850.0295
ASP 860.0196
THR 870.0174
ALA 880.0164
THR 890.0156
TYR 900.0121
PHE 910.0132
CYS 920.0102
CYS 920.0103
ALA 930.0115
ARG 940.0106
TYR 950.0083
TYR 960.0081
TYR 960.0081
ALA 970.0083
GLY 980.0116
SER 990.0130
ASP 1000.0146
ILE 1010.0171
ILE 1010.0172
TRP 1020.0168
GLY 1030.0169
PRO 1040.0179
GLY 1050.0137
THR 1060.0105
LEU 1070.0079
LEU 1070.0078
VAL 1080.0073
THR 1090.0110
VAL 1100.0193
SER 1110.0236
SER 1120.0292
ALA 1130.0188
SER 1140.0170
THR 1150.0127
LYS 1160.0100
GLY 1170.0087
PRO 1180.0065
SER 1190.0043
VAL 1200.0033
PHE 1210.0022
PRO 1220.0016
LEU 1230.0016
ALA 1240.0025
PRO 1250.0042
SER 1260.0043
GLY 1330.0085
THR 1340.0065
THR 1340.0065
ALA 1350.0052
ALA 1360.0035
LEU 1370.0032
GLY 1380.0025
CYS 1390.0020
CYS 1390.0020
LEU 1400.0019
VAL 1410.0028
LYS 1420.0039
ASP 1430.0057
TYR 1440.0055
PHE 1450.0068
PRO 1460.0054
GLU 1470.0026
GLU 1470.0026
PRO 1480.0027
VAL 1490.0032
THR 1500.0051
VAL 1510.0054
SER 1520.0060
TRP 1530.0056
ASN 1540.0082
SER 1550.0091
GLY 1560.0105
ALA 1570.0116
LEU 1580.0096
THR 1590.0091
SER 1600.0081
SER 1600.0081
GLY 1610.0058
VAL 1620.0049
HIS 1630.0012
THR 1640.0013
PHE 1650.0011
PRO 1660.0016
ALA 1670.0018
VAL 1680.0032
VAL 1680.0032
LEU 1690.0055
GLN 1700.0069
SER 1710.0091
SER 1720.0102
GLY 1730.0090
LEU 1740.0075
TYR 1750.0045
SER 1760.0033
SER 1760.0033
LEU 1770.0015
SER 1780.0016
SER 1780.0016
SER 1790.0020
VAL 1800.0019
VAL 1810.0047
THR 1820.0051
VAL 1830.0069
PRO 1840.0097
SER 1850.0093
SER 1850.0093
SER 1860.0122
SER 1870.0111
LEU 1880.0094
GLY 1890.0117
THR 1900.0130
GLN 1910.0112
GLN 1910.0112
THR 1920.0086
TYR 1930.0063
ILE 1940.0051
CYS 1950.0048
CYS 1950.0048
ASN 1960.0050
VAL 1970.0052
ASN 1980.0077
ASN 1980.0076
HIS 1990.0070
LYS 2000.0096
PRO 2010.0093
SER 2020.0114
ASN 2030.0130
THR 2040.0106
LYS 2050.0092
VAL 2060.0062
ASP 2070.0050
LYS 2080.0033
LYS 2090.0039
VAL 2100.0037
GLU 2110.0053
PRO 2120.0053
LYS 2130.0051
SER 2140.0094

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.