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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 16  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.1200
ALA 10.0044
ASP 20.0044
VAL 30.0050
VAL 40.0060
MET 50.0054
THR 60.0056
GLN 70.0044
THR 80.0036
PRO 90.0031
SER 100.0033
SER 100.0033
SER 110.0025
VAL 120.0020
VAL 120.0020
SER 130.0040
SER 130.0040
ALA 140.0054
ALA 150.0069
VAL 160.0074
GLY 170.0080
GLY 180.0068
THR 190.0051
VAL 200.0035
THR 210.0025
THR 210.0025
ILE 220.0023
ASN 230.0031
CYS 240.0041
CYS 240.0040
GLN 250.0052
GLN 250.0051
ALA 260.0052
SER 270.0059
GLN 280.0053
SER 290.0051
ILE 300.0048
SER 310.0047
SER 310.0047
ALA 320.0045
TYR 330.0046
LEU 340.0041
ALA 350.0041
TRP 360.0039
TYR 370.0033
GLN 380.0035
GLN 390.0045
LYS 400.0056
PRO 410.0061
GLY 420.0074
GLN 430.0047
PRO 440.0042
PRO 450.0038
LYS 460.0050
LEU 470.0044
LEU 480.0035
ILE 490.0036
ILE 490.0036
TYR 500.0039
ASP 510.0038
ALA 520.0035
SER 530.0027
ASP 540.0029
LEU 550.0029
ALA 560.0045
SER 570.0054
SER 570.0054
GLY 580.0062
VAL 590.0052
SER 600.0052
SER 610.0046
ARG 620.0050
PHE 630.0032
LYS 640.0024
GLY 650.0021
SER 660.0027
GLY 670.0038
SER 680.0042
GLY 690.0049
THR 700.0051
GLN 710.0047
PHE 720.0041
THR 730.0026
LEU 740.0021
THR 750.0025
ILE 760.0038
SER 770.0055
SER 770.0055
ASP 780.0072
LEU 790.0063
GLU 800.0071
CYS 810.0066
ALA 820.0068
ASP 830.0054
ALA 840.0046
ALA 850.0046
THR 860.0042
TYR 870.0032
TYR 880.0044
CYS 890.0043
CYS 890.0043
GLN 900.0046
THR 910.0050
TYR 920.0049
TYR 930.0050
ALA 940.0051
ILE 950.0046
ILE 960.0043
THR 970.0047
TYR 980.0047
GLY 990.0047
ALA 1000.0048
ALA 1010.0051
PHE 1020.0051
GLY 1030.0051
GLY 1040.0055
GLY 1050.0047
THR 1060.0025
GLU 1070.0032
GLU 1070.0032
VAL 1080.0032
VAL 1090.0043
VAL 1100.0056
LYS 1110.0062
ARG 1120.0069
THR 1130.0092
VAL 1140.0108
ALA 1150.0102
ALA 1160.0103
PRO 1170.0094
SER 1180.0096
SER 1180.0096
VAL 1190.0104
PHE 1200.0110
ILE 1210.0101
PHE 1220.0121
PRO 1230.0121
PRO 1240.0115
SER 1250.0158
ASP 1260.0199
GLU 1270.0211
GLN 1280.0171
LEU 1290.0159
LYS 1300.0234
SER 1310.0227
GLY 1320.0162
THR 1330.0116
ALA 1340.0085
SER 1350.0083
VAL 1360.0076
VAL 1370.0093
CYS 1380.0092
LEU 1390.0093
LEU 1400.0089
ASN 1410.0080
ASN 1420.0072
ASN 1420.0072
PHE 1430.0075
TYR 1440.0073
PRO 1450.0095
ARG 1460.0093
GLU 1470.0109
ALA 1480.0106
LYS 1490.0085
VAL 1500.0059
GLN 1510.0030
TRP 1520.0064
LYS 1530.0150
VAL 1540.0220
ASP 1550.0331
ASN 1560.0330
ALA 1570.0292
LEU 1580.0219
GLN 1590.0172
SER 1600.0158
GLY 1610.0160
ASN 1620.0097
SER 1630.0051
GLN 1640.0052
GLU 1650.0063
SER 1660.0084
SER 1660.0084
VAL 1670.0076
VAL 1670.0076
THR 1680.0063
GLU 1690.0051
GLU 1690.0051
GLN 1700.0046
ASP 1710.0051
SER 1720.0071
LYS 1730.0056
ASP 1740.0061
CYS 1750.0057
THR 1760.0055
TYR 1770.0062
SER 1780.0072
LEU 1790.0080
SER 1800.0085
SER 1810.0074
THR 1820.0065
LEU 1830.0034
THR 1840.0045
LEU 1850.0061
SER 1860.0080
LYS 1870.0044
ALA 1880.0088
ASP 1890.0160
TYR 1900.0109
GLU 1910.0168
LYS 1920.0248
HIS 1930.0292
LYS 1940.0326
LYS 1940.0326
VAL 1950.0291
TYR 1960.0158
ALA 1970.0130
CYS 1980.0067
CYS 1980.0066
GLU 1990.0061
VAL 2000.0078
THR 2010.0098
HIS 2020.0122
GLN 2030.0146
GLY 2040.0143
LEU 2050.0152
SER 2060.0178
SER 2070.0140
PRO 2080.0084
VAL 2090.0100
THR 2100.0097
LYS 2110.0112
SER 2120.0148
PHE 2130.0210
ASN 2140.0334
ARG 2150.0284
GLY 2160.0341
GLU 2170.0456
SER 20.0075
VAL 30.0063
GLU 40.0063
GLU 50.0045
SER 60.0056
GLY 70.0064
GLY 80.0067
ARG 90.0069
LEU 100.0058
VAL 110.0058
THR 120.0049
PRO 130.0035
GLY 140.0056
THR 150.0069
PRO 160.0073
LEU 170.0062
THR 180.0059
LEU 190.0051
THR 200.0047
CYS 210.0045
THR 220.0056
VAL 230.0066
SER 240.0083
GLY 250.0092
PHE 260.0079
SER 270.0066
LEU 280.0052
SER 290.0055
SER 290.0055
ASP 300.0064
TYR 310.0059
ALA 320.0045
MET 330.0042
SER 340.0038
TRP 350.0027
VAL 360.0033
ARG 370.0032
GLN 380.0032
ALA 390.0032
PRO 400.0051
GLY 410.0108
LYS 420.0090
GLY 430.0071
LEU 440.0048
GLU 450.0046
TRP 460.0044
ILE 470.0030
GLY 480.0031
ILE 490.0034
ILE 500.0032
TYR 510.0040
ALA 520.0045
SER 530.0041
GLY 540.0031
SER 550.0033
THR 560.0030
THR 560.0030
TYR 570.0033
TYR 580.0030
ALA 590.0040
SER 600.0046
TRP 610.0046
ALA 620.0036
LYS 630.0044
GLY 640.0054
ARG 650.0046
PHE 660.0039
THR 670.0045
ILE 680.0026
SER 690.0029
LYS 700.0033
THR 710.0039
SER 720.0045
THR 730.0057
THR 740.0047
VAL 750.0035
ASP 760.0037
LEU 770.0036
LYS 780.0049
ILE 790.0044
THR 800.0061
SER 810.0057
PRO 820.0039
THR 830.0026
THR 840.0023
GLU 850.0030
ASP 860.0019
THR 870.0024
ALA 880.0026
THR 890.0031
TYR 900.0021
PHE 910.0025
CYS 920.0040
CYS 920.0040
ALA 930.0049
ARG 940.0054
TYR 950.0059
TYR 960.0066
TYR 960.0066
ALA 970.0063
GLY 980.0059
SER 990.0058
ASP 1000.0063
ILE 1010.0064
ILE 1010.0064
TRP 1020.0056
GLY 1030.0056
PRO 1040.0057
GLY 1050.0041
THR 1060.0043
LEU 1070.0056
LEU 1070.0056
VAL 1080.0047
THR 1090.0043
VAL 1100.0034
SER 1110.0042
SER 1120.0049
ALA 1130.0089
SER 1140.0096
THR 1150.0091
LYS 1160.0087
GLY 1170.0075
PRO 1180.0080
SER 1190.0115
VAL 1200.0092
PHE 1210.0102
PRO 1220.0100
LEU 1230.0098
ALA 1240.0109
PRO 1250.0136
SER 1260.0144
GLY 1330.0178
THR 1340.0105
THR 1340.0104
ALA 1350.0121
ALA 1360.0072
LEU 1370.0073
GLY 1380.0059
CYS 1390.0063
CYS 1390.0064
LEU 1400.0084
VAL 1410.0086
LYS 1420.0081
ASP 1430.0088
TYR 1440.0079
PHE 1450.0075
PRO 1460.0075
GLU 1470.0074
GLU 1470.0074
PRO 1480.0076
VAL 1490.0067
THR 1500.0060
VAL 1510.0068
SER 1520.0067
TRP 1530.0061
ASN 1540.0143
SER 1550.0158
GLY 1560.0186
ALA 1570.0221
LEU 1580.0162
THR 1590.0153
SER 1600.0098
SER 1600.0098
GLY 1610.0035
VAL 1620.0038
HIS 1630.0050
THR 1640.0062
PHE 1650.0083
PRO 1660.0076
ALA 1670.0081
VAL 1680.0088
VAL 1680.0088
LEU 1690.0099
GLN 1700.0106
SER 1710.0123
SER 1720.0121
GLY 1730.0116
LEU 1740.0096
TYR 1750.0086
SER 1760.0084
SER 1760.0084
LEU 1770.0085
SER 1780.0084
SER 1780.0084
SER 1790.0061
VAL 1800.0052
VAL 1810.0005
THR 1820.0032
VAL 1830.0101
PRO 1840.0192
SER 1850.0238
SER 1850.0238
SER 1860.0330
SER 1870.0281
LEU 1880.0268
GLY 1890.0370
THR 1900.0408
GLN 1910.0311
GLN 1910.0310
THR 1920.0223
TYR 1930.0127
ILE 1940.0079
CYS 1950.0022
CYS 1950.0021
ASN 1960.0018
VAL 1970.0039
ASN 1980.0064
ASN 1980.0064
HIS 1990.0069
LYS 2000.0078
PRO 2010.0091
SER 2020.0093
ASN 2030.0085
THR 2040.0070
LYS 2050.0052
VAL 2060.0033
ASP 2070.0015
LYS 2080.0046
LYS 2090.0098
VAL 2100.0110
GLU 2110.0132
PRO 2120.0212
LYS 2130.0203
SER 2140.1200

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.