CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 18  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0475
ALA 10.0048
ASP 20.0036
VAL 30.0036
VAL 40.0035
MET 50.0025
THR 60.0032
GLN 70.0042
THR 80.0065
PRO 90.0084
SER 100.0094
SER 100.0094
SER 110.0102
VAL 120.0099
VAL 120.0099
SER 130.0107
SER 130.0107
ALA 140.0112
ALA 150.0125
VAL 160.0130
GLY 170.0097
GLY 180.0099
THR 190.0085
VAL 200.0080
THR 210.0067
THR 210.0068
ILE 220.0049
ASN 230.0042
CYS 240.0023
CYS 240.0022
GLN 250.0020
GLN 250.0019
ALA 260.0009
SER 270.0019
GLN 280.0017
SER 290.0016
ILE 300.0025
SER 310.0029
SER 310.0029
ALA 320.0033
TYR 330.0034
LEU 340.0025
ALA 350.0030
TRP 360.0022
TYR 370.0036
GLN 380.0041
GLN 390.0050
LYS 400.0072
PRO 410.0083
GLY 420.0083
GLN 430.0053
PRO 440.0054
PRO 450.0050
LYS 460.0065
LEU 470.0052
LEU 480.0039
ILE 490.0035
ILE 490.0035
TYR 500.0038
ASP 510.0036
ALA 520.0033
SER 530.0046
ASP 540.0060
LEU 550.0066
ALA 560.0080
SER 570.0109
SER 570.0109
GLY 580.0105
VAL 590.0068
SER 600.0051
SER 610.0052
ARG 620.0028
PHE 630.0021
LYS 640.0041
GLY 650.0034
SER 660.0052
GLY 670.0042
SER 680.0035
GLY 690.0022
THR 700.0014
GLN 710.0025
PHE 720.0023
THR 730.0037
LEU 740.0025
THR 750.0045
ILE 760.0042
SER 770.0057
SER 770.0056
ASP 780.0063
LEU 790.0087
GLU 800.0108
CYS 810.0134
ALA 820.0107
ASP 830.0082
ALA 840.0096
ALA 850.0069
THR 860.0060
TYR 870.0040
TYR 880.0029
CYS 890.0023
CYS 890.0022
GLN 900.0028
THR 910.0033
TYR 920.0038
TYR 930.0037
ALA 940.0043
ILE 950.0033
ILE 960.0030
THR 970.0044
TYR 980.0038
GLY 990.0031
ALA 1000.0033
ALA 1010.0032
PHE 1020.0031
GLY 1030.0033
GLY 1040.0048
GLY 1050.0042
THR 1060.0069
GLU 1070.0087
GLU 1070.0087
VAL 1080.0087
VAL 1090.0110
VAL 1100.0119
LYS 1110.0128
ARG 1120.0186
THR 1130.0214
VAL 1140.0180
ALA 1150.0173
ALA 1160.0143
PRO 1170.0103
SER 1180.0084
SER 1180.0084
VAL 1190.0062
PHE 1200.0068
ILE 1210.0047
PHE 1220.0063
PRO 1230.0065
PRO 1240.0062
SER 1250.0062
ASP 1260.0055
GLU 1270.0069
GLN 1280.0063
LEU 1290.0066
LYS 1300.0120
SER 1310.0116
GLY 1320.0110
THR 1330.0093
ALA 1340.0072
SER 1350.0057
VAL 1360.0071
VAL 1370.0068
CYS 1380.0055
LEU 1390.0077
LEU 1400.0066
ASN 1410.0084
ASN 1420.0118
ASN 1420.0118
PHE 1430.0095
TYR 1440.0092
PRO 1450.0086
ARG 1460.0039
GLU 1470.0035
ALA 1480.0047
LYS 1490.0078
VAL 1500.0047
GLN 1510.0088
TRP 1520.0087
LYS 1530.0124
VAL 1540.0136
ASP 1550.0162
ASN 1560.0177
ALA 1570.0206
LEU 1580.0177
GLN 1590.0153
SER 1600.0113
GLY 1610.0141
ASN 1620.0140
SER 1630.0102
GLN 1640.0120
GLU 1650.0124
SER 1660.0133
SER 1660.0133
VAL 1670.0131
VAL 1670.0130
THR 1680.0147
GLU 1690.0137
GLU 1690.0139
GLN 1700.0143
ASP 1710.0176
SER 1720.0189
LYS 1730.0179
ASP 1740.0187
CYS 1750.0170
THR 1760.0143
TYR 1770.0119
SER 1780.0110
LEU 1790.0101
SER 1800.0103
SER 1810.0071
THR 1820.0082
LEU 1830.0082
THR 1840.0064
LEU 1850.0089
SER 1860.0121
LYS 1870.0133
ALA 1880.0152
ASP 1890.0138
TYR 1900.0126
GLU 1910.0154
LYS 1920.0174
HIS 1930.0160
LYS 1940.0131
LYS 1940.0131
VAL 1950.0104
TYR 1960.0068
ALA 1970.0055
CYS 1980.0042
CYS 1980.0043
GLU 1990.0075
VAL 2000.0072
THR 2010.0131
HIS 2020.0117
GLN 2030.0171
GLY 2040.0193
LEU 2050.0236
SER 2060.0357
SER 2070.0321
PRO 2080.0187
VAL 2090.0130
THR 2100.0077
LYS 2110.0036
SER 2120.0020
PHE 2130.0027
ASN 2140.0075
ARG 2150.0100
GLY 2160.0108
GLU 2170.0079
SER 20.0036
VAL 30.0043
GLU 40.0056
GLU 50.0061
SER 60.0064
GLY 70.0061
GLY 80.0066
ARG 90.0061
LEU 100.0063
VAL 110.0059
THR 120.0071
PRO 130.0081
GLY 140.0079
THR 150.0054
PRO 160.0062
LEU 170.0059
THR 180.0058
LEU 190.0055
THR 200.0066
CYS 210.0057
THR 220.0058
VAL 230.0046
SER 240.0038
GLY 250.0030
PHE 260.0034
SER 270.0050
LEU 280.0052
SER 290.0070
SER 290.0070
ASP 300.0052
TYR 310.0030
ALA 320.0027
MET 330.0032
SER 340.0039
TRP 350.0047
VAL 360.0052
ARG 370.0065
GLN 380.0053
ALA 390.0074
PRO 400.0077
GLY 410.0148
LYS 420.0115
GLY 430.0057
LEU 440.0052
GLU 450.0050
TRP 460.0038
ILE 470.0061
GLY 480.0051
ILE 490.0040
ILE 500.0050
TYR 510.0045
ALA 520.0058
SER 530.0084
GLY 540.0082
SER 550.0069
THR 560.0061
THR 560.0061
TYR 570.0051
TYR 580.0061
ALA 590.0069
SER 600.0088
TRP 610.0106
ALA 620.0101
LYS 630.0103
GLY 640.0129
ARG 650.0118
PHE 660.0099
THR 670.0091
ILE 680.0072
SER 690.0077
LYS 700.0077
THR 710.0092
SER 720.0086
THR 730.0072
THR 740.0067
VAL 750.0061
ASP 760.0069
LEU 770.0068
LYS 780.0074
ILE 790.0081
THR 800.0096
SER 810.0095
PRO 820.0090
THR 830.0102
THR 840.0108
GLU 850.0114
ASP 860.0076
THR 870.0070
ALA 880.0069
THR 890.0062
TYR 900.0052
PHE 910.0039
CYS 920.0045
CYS 920.0045
ALA 930.0035
ARG 940.0024
TYR 950.0028
TYR 960.0028
TYR 960.0028
ALA 970.0036
GLY 980.0040
SER 990.0040
ASP 1000.0041
ILE 1010.0036
ILE 1010.0036
TRP 1020.0040
GLY 1030.0045
PRO 1040.0048
GLY 1050.0054
THR 1060.0060
LEU 1070.0066
LEU 1070.0066
VAL 1080.0042
THR 1090.0032
VAL 1100.0076
SER 1110.0113
SER 1120.0147
ALA 1130.0306
SER 1140.0330
THR 1150.0277
LYS 1160.0279
GLY 1170.0245
PRO 1180.0183
SER 1190.0107
VAL 1200.0068
PHE 1210.0063
PRO 1220.0066
LEU 1230.0072
ALA 1240.0070
PRO 1250.0086
SER 1260.0101
GLY 1330.0166
THR 1340.0118
THR 1340.0118
ALA 1350.0097
ALA 1360.0075
LEU 1370.0065
GLY 1380.0062
CYS 1390.0041
CYS 1390.0041
LEU 1400.0058
VAL 1410.0051
LYS 1420.0094
ASP 1430.0159
TYR 1440.0130
PHE 1450.0133
PRO 1460.0065
GLU 1470.0035
GLU 1470.0033
PRO 1480.0121
VAL 1490.0121
THR 1500.0222
VAL 1510.0136
SER 1520.0173
TRP 1530.0148
ASN 1540.0198
SER 1550.0261
GLY 1560.0266
ALA 1570.0235
LEU 1580.0174
THR 1590.0193
SER 1600.0160
SER 1600.0160
GLY 1610.0145
VAL 1620.0113
HIS 1630.0121
THR 1640.0123
PHE 1650.0124
PRO 1660.0181
ALA 1670.0162
VAL 1680.0189
VAL 1680.0189
LEU 1690.0239
GLN 1700.0280
SER 1710.0378
SER 1720.0388
GLY 1730.0306
LEU 1740.0224
TYR 1750.0137
SER 1760.0119
SER 1760.0118
LEU 1770.0107
SER 1780.0084
SER 1780.0083
SER 1790.0085
VAL 1800.0085
VAL 1810.0069
THR 1820.0078
VAL 1830.0070
PRO 1840.0090
SER 1850.0109
SER 1850.0109
SER 1860.0097
SER 1870.0053
LEU 1880.0086
GLY 1890.0123
THR 1900.0111
GLN 1910.0110
GLN 1910.0109
THR 1920.0134
TYR 1930.0093
ILE 1940.0122
CYS 1950.0105
CYS 1950.0104
ASN 1960.0184
VAL 1970.0166
ASN 1980.0267
ASN 1980.0265
HIS 1990.0227
LYS 2000.0343
PRO 2010.0274
SER 2020.0368
ASN 2030.0475
THR 2040.0378
LYS 2050.0370
VAL 2060.0273
ASP 2070.0205
LYS 2080.0117
LYS 2090.0115
VAL 2100.0081
GLU 2110.0107
PRO 2120.0092
LYS 2130.0070
SER 2140.0240

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.