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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 20  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0955
ALA 10.0075
ASP 20.0056
VAL 30.0057
VAL 40.0055
MET 50.0031
THR 60.0026
GLN 70.0022
THR 80.0054
PRO 90.0079
SER 100.0075
SER 100.0076
SER 110.0088
VAL 120.0100
VAL 120.0099
SER 130.0100
SER 130.0099
ALA 140.0094
ALA 150.0086
VAL 160.0070
GLY 170.0058
GLY 180.0106
THR 190.0115
VAL 200.0103
THR 210.0097
THR 210.0098
ILE 220.0068
ASN 230.0048
CYS 240.0019
CYS 240.0019
GLN 250.0022
GLN 250.0022
ALA 260.0047
SER 270.0069
GLN 280.0082
SER 290.0085
ILE 300.0080
SER 310.0090
SER 310.0090
ALA 320.0082
TYR 330.0069
LEU 340.0050
ALA 350.0044
TRP 360.0035
TYR 370.0010
GLN 380.0020
GLN 390.0024
LYS 400.0046
PRO 410.0050
GLY 420.0047
GLN 430.0025
PRO 440.0031
PRO 450.0019
LYS 460.0020
LEU 470.0034
LEU 480.0044
ILE 490.0064
ILE 490.0064
TYR 500.0068
ASP 510.0075
ALA 520.0069
SER 530.0085
ASP 540.0098
LEU 550.0095
ALA 560.0105
SER 570.0138
SER 570.0138
GLY 580.0138
VAL 590.0110
SER 600.0109
SER 610.0101
ARG 620.0095
PHE 630.0076
LYS 640.0094
GLY 650.0073
SER 660.0074
GLY 670.0068
SER 680.0076
GLY 690.0077
THR 700.0055
GLN 710.0037
PHE 720.0043
THR 730.0061
LEU 740.0065
THR 750.0093
ILE 760.0085
SER 770.0101
SER 770.0101
ASP 780.0094
LEU 790.0062
GLU 800.0046
CYS 810.0074
ALA 820.0060
ASP 830.0039
ALA 840.0046
ALA 850.0054
THR 860.0046
TYR 870.0037
TYR 880.0015
CYS 890.0012
CYS 890.0012
GLN 900.0024
THR 910.0037
TYR 920.0051
TYR 930.0067
ALA 940.0063
ILE 950.0029
ILE 960.0019
THR 970.0053
TYR 980.0054
GLY 990.0029
ALA 1000.0034
ALA 1010.0032
PHE 1020.0026
GLY 1030.0020
GLY 1040.0037
GLY 1050.0036
THR 1060.0059
GLU 1070.0065
GLU 1070.0065
VAL 1080.0071
VAL 1090.0064
VAL 1100.0062
LYS 1110.0084
ARG 1120.0201
THR 1130.0285
VAL 1140.0282
ALA 1150.0206
ALA 1160.0155
PRO 1170.0076
SER 1180.0074
SER 1180.0074
VAL 1190.0082
PHE 1200.0094
ILE 1210.0105
PHE 1220.0094
PRO 1230.0082
PRO 1240.0064
SER 1250.0077
ASP 1260.0090
GLU 1270.0115
GLN 1280.0077
LEU 1290.0096
LYS 1300.0162
SER 1310.0113
GLY 1320.0143
THR 1330.0089
ALA 1340.0060
SER 1350.0050
VAL 1360.0078
VAL 1370.0091
CYS 1380.0098
LEU 1390.0084
LEU 1400.0064
ASN 1410.0068
ASN 1420.0095
ASN 1420.0094
PHE 1430.0094
TYR 1440.0116
PRO 1450.0163
ARG 1460.0123
GLU 1470.0166
ALA 1480.0110
LYS 1490.0110
VAL 1500.0088
GLN 1510.0087
TRP 1520.0093
LYS 1530.0101
VAL 1540.0099
ASP 1550.0097
ASN 1560.0124
ALA 1570.0125
LEU 1580.0132
GLN 1590.0124
SER 1600.0180
GLY 1610.0175
ASN 1620.0116
SER 1630.0071
GLN 1640.0082
GLU 1650.0084
SER 1660.0087
SER 1660.0087
VAL 1670.0063
VAL 1670.0062
THR 1680.0058
GLU 1690.0038
GLU 1690.0041
GLN 1700.0055
ASP 1710.0099
SER 1720.0134
LYS 1730.0178
ASP 1740.0178
CYS 1750.0108
THR 1760.0092
TYR 1770.0042
SER 1780.0050
LEU 1790.0059
SER 1800.0080
SER 1810.0090
THR 1820.0082
LEU 1830.0075
THR 1840.0076
LEU 1850.0094
SER 1860.0132
LYS 1870.0166
ALA 1880.0219
ASP 1890.0197
TYR 1900.0138
GLU 1910.0193
LYS 1920.0215
HIS 1930.0130
LYS 1940.0101
LYS 1940.0101
VAL 1950.0077
TYR 1960.0070
ALA 1970.0087
CYS 1980.0105
CYS 1980.0105
GLU 1990.0088
VAL 2000.0044
THR 2010.0099
HIS 2020.0170
GLN 2030.0269
GLY 2040.0256
LEU 2050.0225
SER 2060.0339
SER 2070.0241
PRO 2080.0073
VAL 2090.0049
THR 2100.0082
LYS 2110.0098
SER 2120.0094
PHE 2130.0092
ASN 2140.0118
ARG 2150.0127
GLY 2160.0189
GLU 2170.0245
SER 20.0124
VAL 30.0081
GLU 40.0090
GLU 50.0080
SER 60.0113
GLY 70.0143
GLY 80.0128
ARG 90.0129
LEU 100.0105
VAL 110.0139
THR 120.0137
PRO 130.0114
GLY 140.0156
THR 150.0174
PRO 160.0168
LEU 170.0145
THR 180.0131
LEU 190.0111
THR 200.0086
CYS 210.0049
THR 220.0050
VAL 230.0076
SER 240.0130
GLY 250.0176
PHE 260.0145
SER 270.0130
LEU 280.0101
SER 290.0144
SER 290.0144
ASP 300.0152
TYR 310.0109
ALA 320.0060
MET 330.0027
SER 340.0007
TRP 350.0033
VAL 360.0032
ARG 370.0046
GLN 380.0032
ALA 390.0059
PRO 400.0187
GLY 410.0955
LYS 420.0587
GLY 430.0189
LEU 440.0019
GLU 450.0022
TRP 460.0025
ILE 470.0045
GLY 480.0036
ILE 490.0031
ILE 500.0065
TYR 510.0097
ALA 520.0135
SER 530.0185
GLY 540.0152
SER 550.0148
THR 560.0093
THR 560.0094
TYR 570.0082
TYR 580.0081
ALA 590.0046
SER 600.0065
TRP 610.0075
ALA 620.0098
LYS 630.0115
GLY 640.0140
ARG 650.0125
PHE 660.0105
THR 670.0103
ILE 680.0086
SER 690.0089
LYS 700.0065
THR 710.0078
SER 720.0089
THR 730.0054
THR 740.0010
VAL 750.0029
ASP 760.0072
LEU 770.0088
LYS 780.0117
ILE 790.0118
THR 800.0134
SER 810.0141
PRO 820.0123
THR 830.0091
THR 840.0078
GLU 850.0050
ASP 860.0054
THR 870.0065
ALA 880.0056
THR 890.0076
TYR 900.0060
PHE 910.0048
CYS 920.0037
CYS 920.0037
ALA 930.0037
ARG 940.0047
TYR 950.0036
TYR 960.0036
TYR 960.0036
ALA 970.0013
GLY 980.0032
SER 990.0038
ASP 1000.0050
ILE 1010.0074
ILE 1010.0073
TRP 1020.0066
GLY 1030.0077
PRO 1040.0096
GLY 1050.0086
THR 1060.0103
LEU 1070.0100
LEU 1070.0100
VAL 1080.0088
THR 1090.0085
VAL 1100.0093
SER 1110.0097
SER 1120.0108
ALA 1130.0107
SER 1140.0095
THR 1150.0075
LYS 1160.0075
GLY 1170.0065
PRO 1180.0059
SER 1190.0051
VAL 1200.0054
PHE 1210.0053
PRO 1220.0062
LEU 1230.0078
ALA 1240.0089
PRO 1250.0119
SER 1260.0133
GLY 1330.0205
THR 1340.0160
THR 1340.0158
ALA 1350.0142
ALA 1360.0098
LEU 1370.0081
GLY 1380.0064
CYS 1390.0057
CYS 1390.0057
LEU 1400.0056
VAL 1410.0055
LYS 1420.0055
ASP 1430.0062
TYR 1440.0066
PHE 1450.0080
PRO 1460.0071
GLU 1470.0071
GLU 1470.0071
PRO 1480.0040
VAL 1490.0025
THR 1500.0007
VAL 1510.0023
SER 1520.0036
TRP 1530.0035
ASN 1540.0082
SER 1550.0119
GLY 1560.0115
ALA 1570.0113
LEU 1580.0064
THR 1590.0099
SER 1600.0102
SER 1600.0102
GLY 1610.0095
VAL 1620.0082
HIS 1630.0073
THR 1640.0079
PHE 1650.0076
PRO 1660.0073
ALA 1670.0071
VAL 1680.0075
VAL 1680.0075
LEU 1690.0080
GLN 1700.0081
SER 1710.0083
SER 1720.0086
GLY 1730.0079
LEU 1740.0081
TYR 1750.0076
SER 1760.0068
SER 1760.0068
LEU 1770.0058
SER 1780.0069
SER 1780.0069
SER 1790.0066
VAL 1800.0069
VAL 1810.0064
THR 1820.0086
VAL 1830.0076
PRO 1840.0127
SER 1850.0189
SER 1850.0189
SER 1860.0210
SER 1870.0173
LEU 1880.0193
GLY 1890.0259
THR 1900.0249
GLN 1910.0180
GLN 1910.0179
THR 1920.0146
TYR 1930.0075
ILE 1940.0058
CYS 1950.0020
CYS 1950.0020
ASN 1960.0031
VAL 1970.0022
ASN 1980.0022
ASN 1980.0021
HIS 1990.0035
LYS 2000.0040
PRO 2010.0056
SER 2020.0068
ASN 2030.0065
THR 2040.0055
LYS 2050.0048
VAL 2060.0046
ASP 2070.0041
LYS 2080.0034
LYS 2090.0067
VAL 2100.0078
GLU 2110.0114
PRO 2120.0133
LYS 2130.0107
SER 2140.0143

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.