CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 22  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0712
ALA 10.0247
ASP 20.0188
VAL 30.0195
VAL 40.0212
MET 50.0148
THR 60.0139
GLN 70.0079
THR 80.0101
PRO 90.0154
SER 100.0189
SER 100.0190
SER 110.0197
VAL 120.0182
VAL 120.0181
SER 130.0191
SER 130.0190
ALA 140.0169
ALA 150.0153
VAL 160.0111
GLY 170.0073
GLY 180.0128
THR 190.0138
VAL 200.0131
THR 210.0118
THR 210.0121
ILE 220.0078
ASN 230.0046
CYS 240.0046
CYS 240.0046
GLN 250.0112
GLN 250.0110
ALA 260.0163
SER 270.0231
GLN 280.0240
SER 290.0218
ILE 300.0182
SER 310.0179
SER 310.0179
ALA 320.0132
TYR 330.0115
LEU 340.0075
ALA 350.0058
TRP 360.0035
TYR 370.0037
GLN 380.0046
GLN 390.0058
LYS 400.0085
PRO 410.0100
GLY 420.0102
GLN 430.0054
PRO 440.0045
PRO 450.0035
LYS 460.0056
LEU 470.0055
LEU 480.0045
ILE 490.0055
ILE 490.0055
TYR 500.0070
ASP 510.0084
ALA 520.0073
SER 530.0079
ASP 540.0094
LEU 550.0089
ALA 560.0097
SER 570.0122
SER 570.0122
GLY 580.0117
VAL 590.0089
SER 600.0094
SER 610.0118
ARG 620.0079
PHE 630.0060
LYS 640.0084
GLY 650.0063
SER 660.0075
GLY 670.0087
SER 680.0131
GLY 690.0169
THR 700.0154
GLN 710.0093
PHE 720.0043
THR 730.0046
LEU 740.0042
THR 750.0084
ILE 760.0066
SER 770.0092
SER 770.0092
ASP 780.0075
LEU 790.0074
GLU 800.0082
CYS 810.0135
ALA 820.0121
ASP 830.0098
ALA 840.0129
ALA 850.0113
THR 860.0103
TYR 870.0065
TYR 880.0058
CYS 890.0053
CYS 890.0053
GLN 900.0063
THR 910.0106
TYR 920.0104
TYR 930.0142
ALA 940.0133
ILE 950.0079
ILE 960.0070
THR 970.0178
TYR 980.0170
GLY 990.0120
ALA 1000.0071
ALA 1010.0086
PHE 1020.0075
GLY 1030.0085
GLY 1040.0097
GLY 1050.0104
THR 1060.0124
GLU 1070.0153
GLU 1070.0153
VAL 1080.0140
VAL 1090.0178
VAL 1100.0155
LYS 1110.0167
ARG 1120.0209
THR 1130.0214
VAL 1140.0186
ALA 1150.0118
ALA 1160.0059
PRO 1170.0036
SER 1180.0052
SER 1180.0052
VAL 1190.0047
PHE 1200.0063
ILE 1210.0027
PHE 1220.0024
PRO 1230.0017
PRO 1240.0033
SER 1250.0046
ASP 1260.0070
GLU 1270.0093
GLN 1280.0073
LEU 1290.0075
LYS 1300.0152
SER 1310.0129
GLY 1320.0097
THR 1330.0054
ALA 1340.0030
SER 1350.0033
VAL 1360.0023
VAL 1370.0032
CYS 1380.0037
LEU 1390.0029
LEU 1400.0030
ASN 1410.0053
ASN 1420.0095
ASN 1420.0095
PHE 1430.0095
TYR 1440.0121
PRO 1450.0154
ARG 1460.0129
GLU 1470.0132
ALA 1480.0075
LYS 1490.0085
VAL 1500.0065
GLN 1510.0061
TRP 1520.0036
LYS 1530.0041
VAL 1540.0071
ASP 1550.0097
ASN 1560.0103
ALA 1570.0103
LEU 1580.0094
GLN 1590.0067
SER 1600.0054
GLY 1610.0017
ASN 1620.0022
SER 1630.0069
GLN 1640.0069
GLU 1650.0057
SER 1660.0041
SER 1660.0042
VAL 1670.0055
VAL 1670.0056
THR 1680.0069
GLU 1690.0146
GLU 1690.0146
GLN 1700.0153
ASP 1710.0156
SER 1720.0153
LYS 1730.0163
ASP 1740.0178
CYS 1750.0171
THR 1760.0142
TYR 1770.0119
SER 1780.0057
LEU 1790.0039
SER 1800.0026
SER 1810.0044
THR 1820.0040
LEU 1830.0029
THR 1840.0028
LEU 1850.0021
SER 1860.0059
LYS 1870.0095
ALA 1880.0117
ASP 1890.0098
TYR 1900.0085
GLU 1910.0127
LYS 1920.0146
HIS 1930.0121
LYS 1940.0111
LYS 1940.0111
VAL 1950.0075
TYR 1960.0024
ALA 1970.0036
CYS 1980.0048
CYS 1980.0048
GLU 1990.0091
VAL 2000.0061
THR 2010.0086
HIS 2020.0106
GLN 2030.0141
GLY 2040.0079
LEU 2050.0102
SER 2060.0210
SER 2070.0249
PRO 2080.0132
VAL 2090.0109
THR 2100.0107
LYS 2110.0071
SER 2120.0044
PHE 2130.0023
ASN 2140.0074
ARG 2150.0095
GLY 2160.0133
GLU 2170.0139
SER 20.0102
VAL 30.0087
GLU 40.0085
GLU 50.0065
SER 60.0063
GLY 70.0063
GLY 80.0080
ARG 90.0085
LEU 100.0099
VAL 110.0165
THR 120.0238
PRO 130.0280
GLY 140.0283
THR 150.0242
PRO 160.0182
LEU 170.0108
THR 180.0070
LEU 190.0048
THR 200.0061
CYS 210.0071
THR 220.0088
VAL 230.0092
SER 240.0104
GLY 250.0108
PHE 260.0081
SER 270.0079
LEU 280.0079
SER 290.0076
SER 290.0076
ASP 300.0068
TYR 310.0070
ALA 320.0072
MET 330.0074
SER 340.0074
TRP 350.0073
VAL 360.0082
ARG 370.0075
GLN 380.0070
ALA 390.0060
PRO 400.0089
GLY 410.0712
LYS 420.0426
GLY 430.0117
LEU 440.0039
GLU 450.0057
TRP 460.0071
ILE 470.0071
GLY 480.0071
ILE 490.0073
ILE 500.0073
TYR 510.0068
ALA 520.0069
SER 530.0080
GLY 540.0082
SER 550.0081
THR 560.0077
THR 560.0077
TYR 570.0077
TYR 580.0078
ALA 590.0078
SER 600.0078
TRP 610.0070
ALA 620.0080
LYS 630.0076
GLY 640.0063
ARG 650.0070
PHE 660.0057
THR 670.0044
ILE 680.0065
SER 690.0065
LYS 700.0071
THR 710.0082
SER 720.0084
THR 730.0090
THR 740.0083
VAL 750.0069
ASP 760.0058
LEU 770.0043
LYS 780.0047
ILE 790.0081
THR 800.0112
SER 810.0193
PRO 820.0198
THR 830.0228
THR 840.0234
GLU 850.0226
ASP 860.0126
THR 870.0108
ALA 880.0101
THR 890.0060
TYR 900.0063
PHE 910.0071
CYS 920.0072
CYS 920.0072
ALA 930.0072
ARG 940.0068
TYR 950.0054
TYR 960.0039
TYR 960.0039
ALA 970.0044
GLY 980.0051
SER 990.0054
ASP 1000.0051
ILE 1010.0073
ILE 1010.0073
TRP 1020.0073
GLY 1030.0074
PRO 1040.0074
GLY 1050.0066
THR 1060.0057
LEU 1070.0071
LEU 1070.0071
VAL 1080.0075
THR 1090.0094
VAL 1100.0164
SER 1110.0195
SER 1120.0231
ALA 1130.0122
SER 1140.0190
THR 1150.0192
LYS 1160.0199
GLY 1170.0170
PRO 1180.0134
SER 1190.0085
VAL 1200.0072
PHE 1210.0065
PRO 1220.0047
LEU 1230.0036
ALA 1240.0026
PRO 1250.0025
SER 1260.0046
GLY 1330.0228
THR 1340.0168
THR 1340.0168
ALA 1350.0096
ALA 1360.0057
LEU 1370.0034
GLY 1380.0046
CYS 1390.0052
CYS 1390.0052
LEU 1400.0061
VAL 1410.0065
LYS 1420.0097
ASP 1430.0120
TYR 1440.0113
PHE 1450.0127
PRO 1460.0110
GLU 1470.0093
GLU 1470.0093
PRO 1480.0090
VAL 1490.0067
THR 1500.0063
VAL 1510.0055
SER 1520.0074
TRP 1530.0082
ASN 1540.0107
SER 1550.0137
GLY 1560.0141
ALA 1570.0108
LEU 1580.0087
THR 1590.0117
SER 1600.0114
SER 1600.0114
GLY 1610.0099
VAL 1620.0080
HIS 1630.0033
THR 1640.0022
PHE 1650.0032
PRO 1660.0019
ALA 1670.0038
VAL 1680.0072
VAL 1680.0073
LEU 1690.0088
GLN 1700.0133
SER 1710.0175
SER 1720.0192
GLY 1730.0142
LEU 1740.0131
TYR 1750.0082
SER 1760.0079
SER 1760.0079
LEU 1770.0060
SER 1780.0045
SER 1780.0045
SER 1790.0042
VAL 1800.0033
VAL 1810.0079
THR 1820.0090
VAL 1830.0092
PRO 1840.0143
SER 1850.0124
SER 1850.0124
SER 1860.0117
SER 1870.0045
LEU 1880.0023
GLY 1890.0059
THR 1900.0070
GLN 1910.0081
GLN 1910.0081
THR 1920.0097
TYR 1930.0066
ILE 1940.0082
CYS 1950.0080
CYS 1950.0079
ASN 1960.0070
VAL 1970.0054
ASN 1980.0081
ASN 1980.0081
HIS 1990.0121
LYS 2000.0178
PRO 2010.0205
SER 2020.0234
ASN 2030.0238
THR 2040.0170
LYS 2050.0094
VAL 2060.0067
ASP 2070.0075
LYS 2080.0078
LYS 2090.0081
VAL 2100.0062
GLU 2110.0041
PRO 2120.0035
LYS 2130.0058
SER 2140.0096

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.