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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 25  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0465
ALA 10.0113
ASP 20.0094
VAL 30.0079
VAL 40.0045
MET 50.0031
THR 60.0042
GLN 70.0136
THR 80.0165
PRO 90.0200
SER 100.0283
SER 100.0283
SER 110.0258
VAL 120.0233
VAL 120.0232
SER 130.0210
SER 130.0208
ALA 140.0191
ALA 150.0166
VAL 160.0133
GLY 170.0111
GLY 180.0143
THR 190.0171
VAL 200.0172
THR 210.0161
THR 210.0162
ILE 220.0143
ASN 230.0107
CYS 240.0075
CYS 240.0074
GLN 250.0038
GLN 250.0036
ALA 260.0034
SER 270.0069
GLN 280.0095
SER 290.0100
ILE 300.0088
SER 310.0095
SER 310.0095
ALA 320.0071
TYR 330.0089
LEU 340.0054
ALA 350.0084
TRP 360.0100
TYR 370.0084
GLN 380.0120
GLN 390.0119
LYS 400.0135
PRO 410.0143
GLY 420.0151
GLN 430.0089
PRO 440.0049
PRO 450.0045
LYS 460.0134
LEU 470.0106
LEU 480.0110
ILE 490.0111
ILE 490.0111
TYR 500.0100
ASP 510.0079
ALA 520.0044
SER 530.0055
ASP 540.0101
LEU 550.0116
ALA 560.0189
SER 570.0264
SER 570.0264
GLY 580.0273
VAL 590.0216
SER 600.0197
SER 610.0162
ARG 620.0162
PHE 630.0152
LYS 640.0117
GLY 650.0081
SER 660.0060
GLY 670.0046
SER 680.0058
GLY 690.0091
THR 700.0071
GLN 710.0062
PHE 720.0048
THR 730.0101
LEU 740.0118
THR 750.0131
ILE 760.0162
SER 770.0159
SER 770.0159
ASP 780.0154
LEU 790.0100
GLU 800.0078
CYS 810.0082
ALA 820.0096
ASP 830.0112
ALA 840.0099
ALA 850.0159
THR 860.0171
TYR 870.0160
TYR 880.0096
CYS 890.0072
CYS 890.0071
GLN 900.0059
THR 910.0059
TYR 920.0091
TYR 930.0096
ALA 940.0079
ILE 950.0076
ILE 960.0079
THR 970.0106
TYR 980.0093
GLY 990.0088
ALA 1000.0055
ALA 1010.0040
PHE 1020.0030
GLY 1030.0083
GLY 1040.0122
GLY 1050.0155
THR 1060.0216
GLU 1070.0217
GLU 1070.0217
VAL 1080.0186
VAL 1090.0159
VAL 1100.0118
LYS 1110.0186
ARG 1120.0333
THR 1130.0364
VAL 1140.0298
ALA 1150.0195
ALA 1160.0101
PRO 1170.0074
SER 1180.0049
SER 1180.0049
VAL 1190.0050
PHE 1200.0061
ILE 1210.0048
PHE 1220.0047
PRO 1230.0046
PRO 1240.0074
SER 1250.0104
ASP 1260.0127
GLU 1270.0140
GLN 1280.0104
LEU 1290.0124
LYS 1300.0196
SER 1310.0165
GLY 1320.0164
THR 1330.0107
ALA 1340.0082
SER 1350.0058
VAL 1360.0048
VAL 1370.0048
CYS 1380.0045
LEU 1390.0039
LEU 1400.0039
ASN 1410.0059
ASN 1420.0130
ASN 1420.0130
PHE 1430.0136
TYR 1440.0171
PRO 1450.0205
ARG 1460.0167
GLU 1470.0171
ALA 1480.0135
LYS 1490.0155
VAL 1500.0110
GLN 1510.0099
TRP 1520.0056
LYS 1530.0023
VAL 1540.0060
ASP 1550.0100
ASN 1560.0100
ALA 1570.0087
LEU 1580.0086
GLN 1590.0115
SER 1600.0116
GLY 1610.0094
ASN 1620.0055
SER 1630.0041
GLN 1640.0030
GLU 1650.0030
SER 1660.0026
SER 1660.0026
VAL 1670.0035
VAL 1670.0036
THR 1680.0052
GLU 1690.0025
GLU 1690.0026
GLN 1700.0057
ASP 1710.0118
SER 1720.0163
LYS 1730.0230
ASP 1740.0244
CYS 1750.0161
THR 1760.0157
TYR 1770.0116
SER 1780.0065
LEU 1790.0042
SER 1800.0024
SER 1810.0038
THR 1820.0044
LEU 1830.0040
THR 1840.0054
LEU 1850.0077
SER 1860.0122
LYS 1870.0144
ALA 1880.0149
ASP 1890.0116
TYR 1900.0081
GLU 1910.0079
LYS 1920.0071
HIS 1930.0071
LYS 1940.0078
LYS 1940.0078
VAL 1950.0082
TYR 1960.0024
ALA 1970.0034
CYS 1980.0058
CYS 1980.0058
GLU 1990.0138
VAL 2000.0128
THR 2010.0190
HIS 2020.0159
GLN 2030.0187
GLY 2040.0112
LEU 2050.0187
SER 2060.0390
SER 2070.0465
PRO 2080.0251
VAL 2090.0174
THR 2100.0137
LYS 2110.0076
SER 2120.0050
PHE 2130.0022
ASN 2140.0123
ARG 2150.0095
GLY 2160.0157
GLU 2170.0236
SER 20.0171
VAL 30.0147
GLU 40.0149
GLU 50.0108
SER 60.0097
GLY 70.0062
GLY 80.0018
ARG 90.0028
LEU 100.0065
VAL 110.0086
THR 120.0121
PRO 130.0098
GLY 140.0065
THR 150.0089
PRO 160.0082
LEU 170.0048
THR 180.0069
LEU 190.0069
THR 200.0117
CYS 210.0132
THR 220.0170
VAL 230.0175
SER 240.0200
GLY 250.0195
PHE 260.0126
SER 270.0129
LEU 280.0122
SER 290.0120
SER 290.0120
ASP 300.0084
TYR 310.0063
ALA 320.0058
MET 330.0075
SER 340.0071
TRP 350.0071
VAL 360.0070
ARG 370.0069
GLN 380.0043
ALA 390.0033
PRO 400.0048
GLY 410.0178
LYS 420.0085
GLY 430.0019
LEU 440.0023
GLU 450.0037
TRP 460.0044
ILE 470.0082
GLY 480.0080
ILE 490.0074
ILE 500.0082
TYR 510.0068
ALA 520.0092
SER 530.0104
GLY 540.0108
SER 550.0079
THR 560.0088
THR 560.0088
TYR 570.0082
TYR 580.0096
ALA 590.0117
SER 600.0146
TRP 610.0145
ALA 620.0132
LYS 630.0143
GLY 640.0148
ARG 650.0120
PHE 660.0114
THR 670.0119
ILE 680.0098
SER 690.0110
LYS 700.0131
THR 710.0186
SER 720.0202
THR 730.0202
THR 740.0168
VAL 750.0128
ASP 760.0111
LEU 770.0096
LYS 780.0083
ILE 790.0063
THR 800.0081
SER 810.0032
PRO 820.0013
THR 830.0053
THR 840.0094
GLU 850.0098
ASP 860.0046
THR 870.0048
ALA 880.0056
THR 890.0051
TYR 900.0057
PHE 910.0064
CYS 920.0084
CYS 920.0085
ALA 930.0073
ARG 940.0060
TYR 950.0051
TYR 960.0063
TYR 960.0063
ALA 970.0097
GLY 980.0073
SER 990.0060
ASP 1000.0069
ILE 1010.0074
ILE 1010.0073
TRP 1020.0068
GLY 1030.0085
PRO 1040.0095
GLY 1050.0078
THR 1060.0062
LEU 1070.0025
LEU 1070.0025
VAL 1080.0019
THR 1090.0052
VAL 1100.0076
SER 1110.0137
SER 1120.0188
ALA 1130.0102
SER 1140.0085
THR 1150.0074
LYS 1160.0048
GLY 1170.0039
PRO 1180.0023
SER 1190.0035
VAL 1200.0062
PHE 1210.0078
PRO 1220.0077
LEU 1230.0074
ALA 1240.0067
PRO 1250.0061
SER 1260.0051
GLY 1330.0071
THR 1340.0069
THR 1340.0069
ALA 1350.0058
ALA 1360.0061
LEU 1370.0062
GLY 1380.0071
CYS 1390.0076
CYS 1390.0076
LEU 1400.0072
VAL 1410.0060
LYS 1420.0038
ASP 1430.0024
TYR 1440.0025
PHE 1450.0063
PRO 1460.0070
GLU 1470.0073
GLU 1470.0073
PRO 1480.0093
VAL 1490.0073
THR 1500.0095
VAL 1510.0063
SER 1520.0051
TRP 1530.0039
ASN 1540.0040
SER 1550.0040
GLY 1560.0066
ALA 1570.0069
LEU 1580.0049
THR 1590.0068
SER 1600.0031
SER 1600.0031
GLY 1610.0031
VAL 1620.0051
HIS 1630.0056
THR 1640.0063
PHE 1650.0056
PRO 1660.0047
ALA 1670.0056
VAL 1680.0058
VAL 1680.0058
LEU 1690.0066
GLN 1700.0065
SER 1710.0070
SER 1720.0060
GLY 1730.0053
LEU 1740.0042
TYR 1750.0042
SER 1760.0053
SER 1760.0053
LEU 1770.0071
SER 1780.0071
SER 1780.0071
SER 1790.0069
VAL 1800.0067
VAL 1810.0051
THR 1820.0046
VAL 1830.0033
PRO 1840.0076
SER 1850.0066
SER 1850.0066
SER 1860.0141
SER 1870.0141
LEU 1880.0135
GLY 1890.0220
THR 1900.0305
GLN 1910.0207
GLN 1910.0206
THR 1920.0143
TYR 1930.0056
ILE 1940.0046
CYS 1950.0046
CYS 1950.0047
ASN 1960.0049
VAL 1970.0050
ASN 1980.0075
ASN 1980.0075
HIS 1990.0084
LYS 2000.0128
PRO 2010.0115
SER 2020.0111
ASN 2030.0143
THR 2040.0084
LYS 2050.0078
VAL 2060.0038
ASP 2070.0035
LYS 2080.0054
LYS 2090.0059
VAL 2100.0063
GLU 2110.0110
PRO 2120.0075
LYS 2130.0096
SER 2140.0089

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.