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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 28  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0574
ALA 10.0574
ASP 20.0398
VAL 30.0286
VAL 40.0240
MET 50.0204
THR 60.0293
GLN 70.0156
THR 80.0130
PRO 90.0099
SER 100.0129
SER 100.0129
SER 110.0104
VAL 120.0074
VAL 120.0074
SER 130.0150
SER 130.0150
ALA 140.0173
ALA 150.0205
VAL 160.0195
GLY 170.0186
GLY 180.0195
THR 190.0146
VAL 200.0086
THR 210.0056
THR 210.0056
ILE 220.0068
ASN 230.0120
CYS 240.0154
CYS 240.0152
GLN 250.0242
GLN 250.0238
ALA 260.0163
SER 270.0226
GLN 280.0155
SER 290.0053
ILE 300.0082
SER 310.0113
SER 310.0113
ALA 320.0122
TYR 330.0079
LEU 340.0030
ALA 350.0033
TRP 360.0052
TYR 370.0040
GLN 380.0034
GLN 390.0042
LYS 400.0095
PRO 410.0112
GLY 420.0102
GLN 430.0046
PRO 440.0058
PRO 450.0056
LYS 460.0085
LEU 470.0069
LEU 480.0063
ILE 490.0058
ILE 490.0058
TYR 500.0025
ASP 510.0040
ALA 520.0057
SER 530.0071
ASP 540.0061
LEU 550.0135
ALA 560.0153
SER 570.0213
SER 570.0213
GLY 580.0216
VAL 590.0146
SER 600.0140
SER 610.0147
ARG 620.0117
PHE 630.0086
LYS 640.0067
GLY 650.0077
SER 660.0097
GLY 670.0175
SER 680.0131
GLY 690.0096
THR 700.0150
GLN 710.0197
PHE 720.0160
THR 730.0101
LEU 740.0068
THR 750.0059
ILE 760.0082
SER 770.0134
SER 770.0134
ASP 780.0160
LEU 790.0127
GLU 800.0134
CYS 810.0168
ALA 820.0131
ASP 830.0101
ALA 840.0121
ALA 850.0075
THR 860.0072
TYR 870.0056
TYR 880.0047
CYS 890.0048
CYS 890.0048
GLN 900.0046
THR 910.0074
TYR 920.0101
TYR 930.0150
ALA 940.0291
ILE 950.0187
ILE 960.0265
THR 970.0434
TYR 980.0332
GLY 990.0241
ALA 1000.0083
ALA 1010.0096
PHE 1020.0088
GLY 1030.0097
GLY 1040.0090
GLY 1050.0062
THR 1060.0096
GLU 1070.0111
GLU 1070.0110
VAL 1080.0098
VAL 1090.0164
VAL 1100.0170
LYS 1110.0204
ARG 1120.0188
THR 1130.0169
VAL 1140.0138
ALA 1150.0115
ALA 1160.0079
PRO 1170.0072
SER 1180.0031
SER 1180.0032
VAL 1190.0045
PHE 1200.0066
ILE 1210.0061
PHE 1220.0064
PRO 1230.0069
PRO 1240.0038
SER 1250.0038
ASP 1260.0060
GLU 1270.0100
GLN 1280.0085
LEU 1290.0068
LYS 1300.0143
SER 1310.0140
GLY 1320.0076
THR 1330.0061
ALA 1340.0039
SER 1350.0045
VAL 1360.0051
VAL 1370.0051
CYS 1380.0052
LEU 1390.0065
LEU 1400.0056
ASN 1410.0052
ASN 1420.0090
ASN 1420.0091
PHE 1430.0097
TYR 1440.0117
PRO 1450.0124
ARG 1460.0122
GLU 1470.0111
ALA 1480.0069
LYS 1490.0059
VAL 1500.0062
GLN 1510.0044
TRP 1520.0041
LYS 1530.0036
VAL 1540.0046
ASP 1550.0075
ASN 1560.0077
ALA 1570.0040
LEU 1580.0028
GLN 1590.0037
SER 1600.0075
GLY 1610.0064
ASN 1620.0032
SER 1630.0031
GLN 1640.0020
GLU 1650.0039
SER 1660.0075
SER 1660.0075
VAL 1670.0066
VAL 1670.0066
THR 1680.0062
GLU 1690.0151
GLU 1690.0152
GLN 1700.0151
ASP 1710.0163
SER 1720.0231
LYS 1730.0242
ASP 1740.0215
CYS 1750.0160
THR 1760.0137
TYR 1770.0126
SER 1780.0071
LEU 1790.0069
SER 1800.0068
SER 1810.0037
THR 1820.0029
LEU 1830.0032
THR 1840.0037
LEU 1850.0039
SER 1860.0039
LYS 1870.0049
ALA 1880.0056
ASP 1890.0059
TYR 1900.0055
GLU 1910.0056
LYS 1920.0057
HIS 1930.0049
LYS 1940.0096
LYS 1940.0096
VAL 1950.0090
TYR 1960.0060
ALA 1970.0052
CYS 1980.0050
CYS 1980.0050
GLU 1990.0046
VAL 2000.0034
THR 2010.0032
HIS 2020.0073
GLN 2030.0097
GLY 2040.0094
LEU 2050.0075
SER 2060.0110
SER 2070.0078
PRO 2080.0029
VAL 2090.0027
THR 2100.0046
LYS 2110.0053
SER 2120.0063
PHE 2130.0086
ASN 2140.0142
ARG 2150.0121
GLY 2160.0158
GLU 2170.0232
SER 20.0095
VAL 30.0090
GLU 40.0081
GLU 50.0076
SER 60.0066
GLY 70.0072
GLY 80.0114
ARG 90.0109
LEU 100.0107
VAL 110.0141
THR 120.0165
PRO 130.0167
GLY 140.0179
THR 150.0173
PRO 160.0150
LEU 170.0099
THR 180.0080
LEU 190.0074
THR 200.0068
CYS 210.0089
THR 220.0121
VAL 230.0142
SER 240.0168
GLY 250.0191
PHE 260.0180
SER 270.0197
LEU 280.0176
SER 290.0221
SER 290.0222
ASP 300.0197
TYR 310.0145
ALA 320.0092
MET 330.0078
SER 340.0065
TRP 350.0056
VAL 360.0063
ARG 370.0063
GLN 380.0075
ALA 390.0080
PRO 400.0065
GLY 410.0051
LYS 420.0049
GLY 430.0029
LEU 440.0071
GLU 450.0070
TRP 460.0057
ILE 470.0062
GLY 480.0048
ILE 490.0036
ILE 500.0066
TYR 510.0073
ALA 520.0085
SER 530.0139
GLY 540.0109
SER 550.0074
THR 560.0051
THR 560.0051
TYR 570.0056
TYR 580.0065
ALA 590.0108
SER 600.0156
TRP 610.0143
ALA 620.0078
LYS 630.0099
GLY 640.0081
ARG 650.0035
PHE 660.0023
THR 670.0030
ILE 680.0037
SER 690.0058
LYS 700.0092
THR 710.0165
SER 720.0214
THR 730.0196
THR 740.0122
VAL 750.0090
ASP 760.0057
LEU 770.0046
LYS 780.0061
ILE 790.0068
THR 800.0124
SER 810.0136
PRO 820.0123
THR 830.0123
THR 840.0088
GLU 850.0058
ASP 860.0072
THR 870.0072
ALA 880.0074
THR 890.0061
TYR 900.0062
PHE 910.0062
CYS 920.0069
CYS 920.0069
ALA 930.0074
ARG 940.0081
TYR 950.0060
TYR 960.0066
TYR 960.0066
ALA 970.0062
GLY 980.0039
SER 990.0042
ASP 1000.0046
ILE 1010.0070
ILE 1010.0070
TRP 1020.0054
GLY 1030.0043
PRO 1040.0051
GLY 1050.0056
THR 1060.0064
LEU 1070.0108
LEU 1070.0108
VAL 1080.0098
THR 1090.0092
VAL 1100.0134
SER 1110.0145
SER 1120.0162
ALA 1130.0169
SER 1140.0135
THR 1150.0118
LYS 1160.0142
GLY 1170.0107
PRO 1180.0114
SER 1190.0108
VAL 1200.0069
PHE 1210.0056
PRO 1220.0026
LEU 1230.0025
ALA 1240.0023
PRO 1250.0051
SER 1260.0057
GLY 1330.0073
THR 1340.0063
THR 1340.0063
ALA 1350.0059
ALA 1360.0047
LEU 1370.0040
GLY 1380.0040
CYS 1390.0018
CYS 1390.0018
LEU 1400.0040
VAL 1410.0055
LYS 1420.0110
ASP 1430.0143
TYR 1440.0121
PHE 1450.0117
PRO 1460.0108
GLU 1470.0099
GLU 1470.0099
PRO 1480.0087
VAL 1490.0065
THR 1500.0054
VAL 1510.0048
SER 1520.0048
TRP 1530.0043
ASN 1540.0054
SER 1550.0062
GLY 1560.0071
ALA 1570.0085
LEU 1580.0070
THR 1590.0075
SER 1600.0082
SER 1600.0082
GLY 1610.0060
VAL 1620.0054
HIS 1630.0040
THR 1640.0042
PHE 1650.0044
PRO 1660.0069
ALA 1670.0071
VAL 1680.0103
VAL 1680.0103
LEU 1690.0227
GLN 1700.0262
SER 1710.0365
SER 1720.0383
GLY 1730.0330
LEU 1740.0227
TYR 1750.0132
SER 1760.0100
SER 1760.0100
LEU 1770.0062
SER 1780.0025
SER 1780.0025
SER 1790.0028
VAL 1800.0030
VAL 1810.0050
THR 1820.0048
VAL 1830.0058
PRO 1840.0080
SER 1850.0079
SER 1850.0079
SER 1860.0103
SER 1870.0097
LEU 1880.0092
GLY 1890.0117
THR 1900.0136
GLN 1910.0107
GLN 1910.0107
THR 1920.0098
TYR 1930.0049
ILE 1940.0051
CYS 1950.0049
CYS 1950.0049
ASN 1960.0028
VAL 1970.0033
ASN 1980.0021
ASN 1980.0021
HIS 1990.0039
LYS 2000.0023
PRO 2010.0036
SER 2020.0051
ASN 2030.0043
THR 2040.0054
LYS 2050.0024
VAL 2060.0042
ASP 2070.0038
LYS 2080.0051
LYS 2090.0048
VAL 2100.0042
GLU 2110.0068
PRO 2120.0065
LYS 2130.0075
SER 2140.0085

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.