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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 30  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0346
ALA 10.0056
ASP 20.0045
VAL 30.0025
VAL 40.0044
MET 50.0052
THR 60.0054
GLN 70.0072
THR 80.0067
PRO 90.0065
SER 100.0086
SER 100.0086
SER 110.0071
VAL 120.0056
VAL 120.0056
SER 130.0043
SER 130.0043
ALA 140.0039
ALA 150.0050
VAL 160.0077
GLY 170.0093
GLY 180.0070
THR 190.0062
VAL 200.0051
THR 210.0059
THR 210.0059
ILE 220.0062
ASN 230.0061
CYS 240.0064
CYS 240.0064
GLN 250.0043
GLN 250.0044
ALA 260.0038
SER 270.0029
GLN 280.0029
SER 290.0045
ILE 300.0057
SER 310.0086
SER 310.0085
ALA 320.0096
TYR 330.0094
LEU 340.0073
ALA 350.0079
TRP 360.0075
TYR 370.0062
GLN 380.0063
GLN 390.0062
LYS 400.0050
PRO 410.0084
GLY 420.0110
GLN 430.0081
PRO 440.0059
PRO 450.0044
LYS 460.0114
LEU 470.0095
LEU 480.0087
ILE 490.0109
ILE 490.0109
TYR 500.0116
ASP 510.0116
ALA 520.0106
SER 530.0127
ASP 540.0160
LEU 550.0180
ALA 560.0218
SER 570.0300
SER 570.0300
GLY 580.0291
VAL 590.0182
SER 600.0113
SER 610.0088
ARG 620.0056
PHE 630.0064
LYS 640.0083
GLY 650.0098
SER 660.0112
GLY 670.0091
SER 680.0092
GLY 690.0075
THR 700.0052
GLN 710.0052
PHE 720.0065
THR 730.0072
LEU 740.0064
THR 750.0055
ILE 760.0055
SER 770.0070
SER 770.0070
ASP 780.0080
LEU 790.0057
GLU 800.0065
CYS 810.0068
ALA 820.0058
ASP 830.0045
ALA 840.0043
ALA 850.0060
THR 860.0072
TYR 870.0076
TYR 880.0059
CYS 890.0058
CYS 890.0058
GLN 900.0056
THR 910.0049
TYR 920.0069
TYR 930.0063
ALA 940.0044
ILE 950.0042
ILE 960.0044
THR 970.0036
TYR 980.0018
GLY 990.0021
ALA 1000.0033
ALA 1010.0033
PHE 1020.0039
GLY 1030.0071
GLY 1040.0071
GLY 1050.0069
THR 1060.0082
GLU 1070.0071
GLU 1070.0071
VAL 1080.0053
VAL 1090.0048
VAL 1100.0044
LYS 1110.0056
ARG 1120.0105
THR 1130.0089
VAL 1140.0074
ALA 1150.0056
ALA 1160.0036
PRO 1170.0033
SER 1180.0022
SER 1180.0022
VAL 1190.0030
PHE 1200.0036
ILE 1210.0033
PHE 1220.0027
PRO 1230.0032
PRO 1240.0022
SER 1250.0072
ASP 1260.0138
GLU 1270.0142
GLN 1280.0108
LEU 1290.0117
LYS 1300.0260
SER 1310.0263
GLY 1320.0186
THR 1330.0109
ALA 1340.0058
SER 1350.0036
VAL 1360.0026
VAL 1370.0025
CYS 1380.0029
LEU 1390.0018
LEU 1400.0019
ASN 1410.0024
ASN 1420.0057
ASN 1420.0057
PHE 1430.0060
TYR 1440.0073
PRO 1450.0090
ARG 1460.0090
GLU 1470.0090
ALA 1480.0067
LYS 1490.0057
VAL 1500.0040
GLN 1510.0094
TRP 1520.0088
LYS 1530.0112
VAL 1540.0072
ASP 1550.0075
ASN 1560.0153
ALA 1570.0141
LEU 1580.0148
GLN 1590.0121
SER 1600.0163
GLY 1610.0151
ASN 1620.0085
SER 1630.0051
GLN 1640.0039
GLU 1650.0042
SER 1660.0038
SER 1660.0038
VAL 1670.0052
VAL 1670.0052
THR 1680.0063
GLU 1690.0087
GLU 1690.0087
GLN 1700.0081
ASP 1710.0084
SER 1720.0099
LYS 1730.0090
ASP 1740.0084
CYS 1750.0078
THR 1760.0079
TYR 1770.0086
SER 1780.0046
LEU 1790.0039
SER 1800.0029
SER 1810.0038
THR 1820.0029
LEU 1830.0034
THR 1840.0052
LEU 1850.0063
SER 1860.0088
LYS 1870.0066
ALA 1880.0063
ASP 1890.0106
TYR 1900.0057
GLU 1910.0070
LYS 1920.0124
HIS 1930.0068
LYS 1940.0088
LYS 1940.0088
VAL 1950.0094
TYR 1960.0049
ALA 1970.0068
CYS 1980.0074
CYS 1980.0074
GLU 1990.0065
VAL 2000.0042
THR 2010.0059
HIS 2020.0087
GLN 2030.0111
GLY 2040.0073
LEU 2050.0153
SER 2060.0302
SER 2070.0272
PRO 2080.0059
VAL 2090.0061
THR 2100.0074
LYS 2110.0058
SER 2120.0063
PHE 2130.0062
ASN 2140.0122
ARG 2150.0097
GLY 2160.0149
GLU 2170.0222
SER 20.0120
VAL 30.0099
GLU 40.0157
GLU 50.0157
SER 60.0157
GLY 70.0140
GLY 80.0133
ARG 90.0120
LEU 100.0140
VAL 110.0225
THR 120.0295
PRO 130.0294
GLY 140.0295
THR 150.0304
PRO 160.0296
LEU 170.0170
THR 180.0175
LEU 190.0153
THR 200.0147
CYS 210.0125
THR 220.0131
VAL 230.0060
SER 240.0070
GLY 250.0114
PHE 260.0115
SER 270.0141
LEU 280.0148
SER 290.0246
SER 290.0246
ASP 300.0243
TYR 310.0189
ALA 320.0104
MET 330.0034
SER 340.0021
TRP 350.0096
VAL 360.0093
ARG 370.0090
GLN 380.0068
ALA 390.0050
PRO 400.0047
GLY 410.0069
LYS 420.0065
GLY 430.0064
LEU 440.0054
GLU 450.0056
TRP 460.0053
ILE 470.0092
GLY 480.0047
ILE 490.0010
ILE 500.0068
TYR 510.0129
ALA 520.0190
SER 530.0333
GLY 540.0249
SER 550.0166
THR 560.0061
THR 560.0062
TYR 570.0029
TYR 580.0084
ALA 590.0112
SER 600.0150
TRP 610.0164
ALA 620.0154
LYS 630.0168
GLY 640.0181
ARG 650.0162
PHE 660.0139
THR 670.0130
ILE 680.0092
SER 690.0118
LYS 700.0127
THR 710.0240
SER 720.0238
THR 730.0140
THR 740.0113
VAL 750.0079
ASP 760.0106
LEU 770.0168
LYS 780.0169
ILE 790.0145
THR 800.0239
SER 810.0221
PRO 820.0181
THR 830.0188
THR 840.0124
GLU 850.0050
ASP 860.0091
THR 870.0058
ALA 880.0057
THR 890.0086
TYR 900.0096
PHE 910.0102
CYS 920.0075
CYS 920.0075
ALA 930.0051
ARG 940.0059
TYR 950.0099
TYR 960.0124
TYR 960.0124
ALA 970.0098
GLY 980.0058
SER 990.0039
ASP 1000.0075
ILE 1010.0084
ILE 1010.0084
TRP 1020.0081
GLY 1030.0121
PRO 1040.0126
GLY 1050.0127
THR 1060.0127
LEU 1070.0081
LEU 1070.0082
VAL 1080.0096
THR 1090.0092
VAL 1100.0174
SER 1110.0247
SER 1120.0346
ALA 1130.0251
SER 1140.0211
THR 1150.0149
LYS 1160.0109
GLY 1170.0093
PRO 1180.0098
SER 1190.0053
VAL 1200.0043
PHE 1210.0039
PRO 1220.0015
LEU 1230.0015
ALA 1240.0007
PRO 1250.0029
SER 1260.0034
GLY 1330.0187
THR 1340.0123
THR 1340.0123
ALA 1350.0071
ALA 1360.0040
LEU 1370.0030
GLY 1380.0026
CYS 1390.0041
CYS 1390.0041
LEU 1400.0046
VAL 1410.0049
LYS 1420.0077
ASP 1430.0068
TYR 1440.0069
PHE 1450.0112
PRO 1460.0085
GLU 1470.0043
GLU 1470.0043
PRO 1480.0027
VAL 1490.0046
THR 1500.0053
VAL 1510.0052
SER 1520.0043
TRP 1530.0038
ASN 1540.0057
SER 1550.0060
GLY 1560.0089
ALA 1570.0091
LEU 1580.0076
THR 1590.0088
SER 1600.0054
SER 1600.0055
GLY 1610.0049
VAL 1620.0043
HIS 1630.0032
THR 1640.0034
PHE 1650.0030
PRO 1660.0034
ALA 1670.0023
VAL 1680.0014
VAL 1680.0014
LEU 1690.0031
GLN 1700.0049
SER 1710.0073
SER 1720.0133
GLY 1730.0115
LEU 1740.0094
TYR 1750.0041
SER 1760.0049
SER 1760.0049
LEU 1770.0050
SER 1780.0038
SER 1780.0038
SER 1790.0036
VAL 1800.0037
VAL 1810.0043
THR 1820.0057
VAL 1830.0066
PRO 1840.0139
SER 1850.0109
SER 1850.0109
SER 1860.0118
SER 1870.0106
LEU 1880.0046
GLY 1890.0070
THR 1900.0173
GLN 1910.0139
GLN 1910.0139
THR 1920.0101
TYR 1930.0047
ILE 1940.0028
CYS 1950.0023
CYS 1950.0023
ASN 1960.0042
VAL 1970.0051
ASN 1980.0058
ASN 1980.0058
HIS 1990.0058
LYS 2000.0042
PRO 2010.0058
SER 2020.0070
ASN 2030.0065
THR 2040.0078
LYS 2050.0065
VAL 2060.0044
ASP 2070.0034
LYS 2080.0020
LYS 2090.0029
VAL 2100.0018
GLU 2110.0032
PRO 2120.0039
LYS 2130.0068
SER 2140.0262

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.