CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 31  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0487
ALA 10.0073
ASP 20.0058
VAL 30.0053
VAL 40.0026
MET 50.0041
THR 60.0068
GLN 70.0048
THR 80.0038
PRO 90.0029
SER 100.0040
SER 100.0040
SER 110.0044
VAL 120.0058
VAL 120.0058
SER 130.0089
SER 130.0089
ALA 140.0095
ALA 150.0097
VAL 160.0097
GLY 170.0088
GLY 180.0113
THR 190.0087
VAL 200.0066
THR 210.0059
THR 210.0059
ILE 220.0017
ASN 230.0035
CYS 240.0053
CYS 240.0052
GLN 250.0094
GLN 250.0093
ALA 260.0081
SER 270.0080
GLN 280.0102
SER 290.0132
ILE 300.0120
SER 310.0146
SER 310.0146
ALA 320.0129
TYR 330.0096
LEU 340.0034
ALA 350.0029
TRP 360.0028
TYR 370.0027
GLN 380.0019
GLN 390.0012
LYS 400.0027
PRO 410.0023
GLY 420.0032
GLN 430.0029
PRO 440.0033
PRO 450.0032
LYS 460.0044
LEU 470.0051
LEU 480.0049
ILE 490.0045
ILE 490.0045
TYR 500.0042
ASP 510.0033
ALA 520.0035
SER 530.0021
ASP 540.0053
LEU 550.0102
ALA 560.0123
SER 570.0165
SER 570.0165
GLY 580.0150
VAL 590.0121
SER 600.0124
SER 610.0123
ARG 620.0101
PHE 630.0083
LYS 640.0064
GLY 650.0041
SER 660.0031
GLY 670.0111
SER 680.0138
GLY 690.0157
THR 700.0123
GLN 710.0115
PHE 720.0088
THR 730.0031
LEU 740.0033
THR 750.0048
ILE 760.0073
SER 770.0094
SER 770.0094
ASP 780.0094
LEU 790.0079
GLU 800.0070
CYS 810.0073
ALA 820.0056
ASP 830.0059
ALA 840.0059
ALA 850.0024
THR 860.0024
TYR 870.0031
TYR 880.0019
CYS 890.0022
CYS 890.0022
GLN 900.0012
THR 910.0046
TYR 920.0058
TYR 930.0097
ALA 940.0145
ILE 950.0120
ILE 960.0141
THR 970.0157
TYR 980.0105
GLY 990.0084
ALA 1000.0049
ALA 1010.0029
PHE 1020.0023
GLY 1030.0027
GLY 1040.0028
GLY 1050.0027
THR 1060.0043
GLU 1070.0041
GLU 1070.0041
VAL 1080.0048
VAL 1090.0078
VAL 1100.0084
LYS 1110.0097
ARG 1120.0166
THR 1130.0170
VAL 1140.0144
ALA 1150.0115
ALA 1160.0111
PRO 1170.0134
SER 1180.0116
SER 1180.0116
VAL 1190.0120
PHE 1200.0108
ILE 1210.0090
PHE 1220.0091
PRO 1230.0087
PRO 1240.0115
SER 1250.0157
ASP 1260.0196
GLU 1270.0208
GLN 1280.0157
LEU 1290.0164
LYS 1300.0294
SER 1310.0279
GLY 1320.0223
THR 1330.0143
ALA 1340.0106
SER 1350.0094
VAL 1360.0080
VAL 1370.0092
CYS 1380.0093
LEU 1390.0085
LEU 1400.0087
ASN 1410.0077
ASN 1420.0085
ASN 1420.0085
PHE 1430.0089
TYR 1440.0104
PRO 1450.0109
ARG 1460.0100
GLU 1470.0110
ALA 1480.0078
LYS 1490.0091
VAL 1500.0109
GLN 1510.0178
TRP 1520.0146
LYS 1530.0145
VAL 1540.0077
ASP 1550.0095
ASN 1560.0179
ALA 1570.0193
LEU 1580.0230
GLN 1590.0213
SER 1600.0258
GLY 1610.0280
ASN 1620.0204
SER 1630.0066
GLN 1640.0039
GLU 1650.0031
SER 1660.0048
SER 1660.0048
VAL 1670.0046
VAL 1670.0046
THR 1680.0050
GLU 1690.0057
GLU 1690.0056
GLN 1700.0073
ASP 1710.0077
SER 1720.0074
LYS 1730.0092
ASP 1740.0109
CYS 1750.0101
THR 1760.0089
TYR 1770.0081
SER 1780.0061
LEU 1790.0059
SER 1800.0059
SER 1810.0091
THR 1820.0088
LEU 1830.0085
THR 1840.0110
LEU 1850.0107
SER 1860.0157
LYS 1870.0150
ALA 1880.0167
ASP 1890.0179
TYR 1900.0126
GLU 1910.0127
LYS 1920.0174
HIS 1930.0098
LYS 1940.0089
LYS 1940.0089
VAL 1950.0073
TYR 1960.0048
ALA 1970.0085
CYS 1980.0127
CYS 1980.0127
GLU 1990.0134
VAL 2000.0118
THR 2010.0104
HIS 2020.0121
GLN 2030.0111
GLY 2040.0107
LEU 2050.0265
SER 2060.0487
SER 2070.0474
PRO 2080.0172
VAL 2090.0190
THR 2100.0170
LYS 2110.0129
SER 2120.0098
PHE 2130.0074
ASN 2140.0065
ARG 2150.0041
GLY 2160.0077
GLU 2170.0088
SER 20.0156
VAL 30.0121
GLU 40.0110
GLU 50.0040
SER 60.0039
GLY 70.0047
GLY 80.0094
ARG 90.0115
LEU 100.0095
VAL 110.0143
THR 120.0170
PRO 130.0190
GLY 140.0221
THR 150.0210
PRO 160.0172
LEU 170.0082
THR 180.0052
LEU 190.0043
THR 200.0063
CYS 210.0066
THR 220.0113
VAL 230.0159
SER 240.0228
GLY 250.0261
PHE 260.0188
SER 270.0134
LEU 280.0067
SER 290.0059
SER 290.0060
ASP 300.0110
TYR 310.0095
ALA 320.0067
MET 330.0043
SER 340.0043
TRP 350.0024
VAL 360.0029
ARG 370.0026
GLN 380.0011
ALA 390.0036
PRO 400.0057
GLY 410.0029
LYS 420.0040
GLY 430.0024
LEU 440.0033
GLU 450.0030
TRP 460.0040
ILE 470.0057
GLY 480.0074
ILE 490.0078
ILE 500.0083
TYR 510.0105
ALA 520.0095
SER 530.0194
GLY 540.0165
SER 550.0185
THR 560.0128
THR 560.0129
TYR 570.0128
TYR 580.0105
ALA 590.0085
SER 600.0094
TRP 610.0072
ALA 620.0074
LYS 630.0082
GLY 640.0076
ARG 650.0039
PHE 660.0040
THR 670.0059
ILE 680.0089
SER 690.0104
LYS 700.0089
THR 710.0180
SER 720.0176
THR 730.0179
THR 740.0104
VAL 750.0052
ASP 760.0071
LEU 770.0046
LYS 780.0046
ILE 790.0043
THR 800.0091
SER 810.0140
PRO 820.0128
THR 830.0138
THR 840.0112
GLU 850.0107
ASP 860.0043
THR 870.0004
ALA 880.0026
THR 890.0022
TYR 900.0024
PHE 910.0035
CYS 920.0049
CYS 920.0050
ALA 930.0073
ARG 940.0092
TYR 950.0065
TYR 960.0101
TYR 960.0101
ALA 970.0103
GLY 980.0071
SER 990.0061
ASP 1000.0083
ILE 1010.0112
ILE 1010.0111
TRP 1020.0085
GLY 1030.0082
PRO 1040.0060
GLY 1050.0044
THR 1060.0030
LEU 1070.0067
LEU 1070.0068
VAL 1080.0053
THR 1090.0051
VAL 1100.0055
SER 1110.0048
SER 1120.0089
ALA 1130.0167
SER 1140.0190
THR 1150.0178
LYS 1160.0182
GLY 1170.0144
PRO 1180.0124
SER 1190.0063
VAL 1200.0055
PHE 1210.0082
PRO 1220.0085
LEU 1230.0085
ALA 1240.0091
PRO 1250.0089
SER 1260.0070
GLY 1330.0076
THR 1340.0048
THR 1340.0048
ALA 1350.0044
ALA 1360.0055
LEU 1370.0068
GLY 1380.0077
CYS 1390.0067
CYS 1390.0067
LEU 1400.0060
VAL 1410.0046
LYS 1420.0095
ASP 1430.0126
TYR 1440.0131
PHE 1450.0162
PRO 1460.0141
GLU 1470.0128
GLU 1470.0129
PRO 1480.0140
VAL 1490.0113
THR 1500.0110
VAL 1510.0069
SER 1520.0066
TRP 1530.0063
ASN 1540.0072
SER 1550.0070
GLY 1560.0072
ALA 1570.0084
LEU 1580.0076
THR 1590.0075
SER 1600.0071
SER 1600.0071
GLY 1610.0050
VAL 1620.0048
HIS 1630.0038
THR 1640.0050
PHE 1650.0050
PRO 1660.0065
ALA 1670.0047
VAL 1680.0079
VAL 1680.0078
LEU 1690.0156
GLN 1700.0185
SER 1710.0256
SER 1720.0270
GLY 1730.0228
LEU 1740.0185
TYR 1750.0112
SER 1760.0081
SER 1760.0080
LEU 1770.0065
SER 1780.0055
SER 1780.0055
SER 1790.0054
VAL 1800.0055
VAL 1810.0043
THR 1820.0035
VAL 1830.0050
PRO 1840.0077
SER 1850.0064
SER 1850.0064
SER 1860.0117
SER 1870.0123
LEU 1880.0126
GLY 1890.0193
THR 1900.0287
GLN 1910.0195
GLN 1910.0194
THR 1920.0153
TYR 1930.0076
ILE 1940.0073
CYS 1950.0066
CYS 1950.0067
ASN 1960.0064
VAL 1970.0083
ASN 1980.0102
ASN 1980.0102
HIS 1990.0140
LYS 2000.0149
PRO 2010.0154
SER 2020.0169
ASN 2030.0154
THR 2040.0127
LYS 2050.0092
VAL 2060.0064
ASP 2070.0046
LYS 2080.0059
LYS 2090.0064
VAL 2100.0074
GLU 2110.0102
PRO 2120.0085
LYS 2130.0072
SER 2140.0122

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.