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***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 34  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0715
ALA 10.0114
ASP 20.0138
VAL 30.0156
VAL 40.0253
MET 50.0185
THR 60.0207
GLN 70.0078
THR 80.0046
PRO 90.0045
SER 100.0053
SER 100.0053
SER 110.0062
VAL 120.0062
VAL 120.0062
SER 130.0061
SER 130.0060
ALA 140.0041
ALA 150.0019
VAL 160.0027
GLY 170.0042
GLY 180.0039
THR 190.0038
VAL 200.0040
THR 210.0051
THR 210.0051
ILE 220.0042
ASN 230.0057
CYS 240.0086
CYS 240.0086
GLN 250.0186
GLN 250.0182
ALA 260.0202
SER 270.0285
GLN 280.0219
SER 290.0176
ILE 300.0121
SER 310.0101
SER 310.0101
ALA 320.0049
TYR 330.0054
LEU 340.0070
ALA 350.0078
TRP 360.0080
TYR 370.0068
GLN 380.0039
GLN 390.0022
LYS 400.0111
PRO 410.0173
GLY 420.0203
GLN 430.0099
PRO 440.0042
PRO 450.0048
LYS 460.0070
LEU 470.0089
LEU 480.0086
ILE 490.0083
ILE 490.0083
TYR 500.0083
ASP 510.0070
ALA 520.0055
SER 530.0035
ASP 540.0054
LEU 550.0104
ALA 560.0135
SER 570.0163
SER 570.0163
GLY 580.0143
VAL 590.0110
SER 600.0099
SER 610.0089
ARG 620.0066
PHE 630.0062
LYS 640.0040
GLY 650.0045
SER 660.0047
GLY 670.0102
SER 680.0122
GLY 690.0166
THR 700.0203
GLN 710.0157
PHE 720.0072
THR 730.0053
LEU 740.0049
THR 750.0042
ILE 760.0038
SER 770.0038
SER 770.0038
ASP 780.0037
LEU 790.0031
GLU 800.0049
CYS 810.0068
ALA 820.0072
ASP 830.0044
ALA 840.0057
ALA 850.0046
THR 860.0034
TYR 870.0029
TYR 880.0061
CYS 890.0073
CYS 890.0073
GLN 900.0083
THR 910.0091
TYR 920.0081
TYR 930.0071
ALA 940.0031
ILE 950.0045
ILE 960.0041
THR 970.0088
TYR 980.0092
GLY 990.0093
ALA 1000.0081
ALA 1010.0083
PHE 1020.0072
GLY 1030.0100
GLY 1040.0077
GLY 1050.0060
THR 1060.0033
GLU 1070.0045
GLU 1070.0045
VAL 1080.0042
VAL 1090.0059
VAL 1100.0034
LYS 1110.0027
ARG 1120.0068
THR 1130.0067
VAL 1140.0051
ALA 1150.0051
ALA 1160.0055
PRO 1170.0050
SER 1180.0063
SER 1180.0063
VAL 1190.0085
PHE 1200.0100
ILE 1210.0084
PHE 1220.0081
PRO 1230.0080
PRO 1240.0100
SER 1250.0167
ASP 1260.0337
GLU 1270.0330
GLN 1280.0218
LEU 1290.0264
LYS 1300.0715
SER 1310.0637
GLY 1320.0390
THR 1330.0170
ALA 1340.0059
SER 1350.0111
VAL 1360.0100
VAL 1370.0099
CYS 1380.0094
LEU 1390.0076
LEU 1400.0060
ASN 1410.0037
ASN 1420.0018
ASN 1420.0018
PHE 1430.0014
TYR 1440.0021
PRO 1450.0039
ARG 1460.0049
GLU 1470.0046
ALA 1480.0059
LYS 1490.0072
VAL 1500.0084
GLN 1510.0059
TRP 1520.0044
LYS 1530.0053
VAL 1540.0083
ASP 1550.0184
ASN 1560.0272
ALA 1570.0173
LEU 1580.0108
GLN 1590.0108
SER 1600.0102
GLY 1610.0105
ASN 1620.0074
SER 1630.0113
GLN 1640.0097
GLU 1650.0066
SER 1660.0096
SER 1660.0097
VAL 1670.0086
VAL 1670.0086
THR 1680.0075
GLU 1690.0147
GLU 1690.0148
GLN 1700.0116
ASP 1710.0128
SER 1720.0177
LYS 1730.0164
ASP 1740.0105
CYS 1750.0083
THR 1760.0060
TYR 1770.0067
SER 1780.0030
LEU 1790.0055
SER 1800.0072
SER 1810.0092
THR 1820.0101
LEU 1830.0095
THR 1840.0104
LEU 1850.0081
SER 1860.0061
LYS 1870.0137
ALA 1880.0122
ASP 1890.0128
TYR 1900.0122
GLU 1910.0184
LYS 1920.0215
HIS 1930.0041
LYS 1940.0084
LYS 1940.0083
VAL 1950.0142
TYR 1960.0068
ALA 1970.0079
CYS 1980.0078
CYS 1980.0076
GLU 1990.0106
VAL 2000.0096
THR 2010.0090
HIS 2020.0074
GLN 2030.0082
GLY 2040.0103
LEU 2050.0141
SER 2060.0236
SER 2070.0237
PRO 2080.0141
VAL 2090.0129
THR 2100.0134
LYS 2110.0099
SER 2120.0108
PHE 2130.0132
ASN 2140.0213
ARG 2150.0169
GLY 2160.0270
GLU 2170.0385
SER 20.0074
VAL 30.0072
GLU 40.0100
GLU 50.0122
SER 60.0131
GLY 70.0130
GLY 80.0128
ARG 90.0084
LEU 100.0046
VAL 110.0085
THR 120.0130
PRO 130.0137
GLY 140.0143
THR 150.0136
PRO 160.0129
LEU 170.0093
THR 180.0111
LEU 190.0124
THR 200.0113
CYS 210.0101
THR 220.0096
VAL 230.0074
SER 240.0088
GLY 250.0115
PHE 260.0099
SER 270.0089
LEU 280.0074
SER 290.0106
SER 290.0106
ASP 300.0106
TYR 310.0080
ALA 320.0048
MET 330.0045
SER 340.0053
TRP 350.0072
VAL 360.0071
ARG 370.0072
GLN 380.0096
ALA 390.0122
PRO 400.0124
GLY 410.0095
LYS 420.0113
GLY 430.0051
LEU 440.0036
GLU 450.0042
TRP 460.0020
ILE 470.0059
GLY 480.0038
ILE 490.0021
ILE 500.0033
TYR 510.0057
ALA 520.0085
SER 530.0114
GLY 540.0081
SER 550.0072
THR 560.0032
THR 560.0032
TYR 570.0036
TYR 580.0041
ALA 590.0040
SER 600.0053
TRP 610.0039
ALA 620.0060
LYS 630.0046
GLY 640.0034
ARG 650.0054
PHE 660.0058
THR 670.0057
ILE 680.0061
SER 690.0057
LYS 700.0050
THR 710.0091
SER 720.0079
THR 730.0062
THR 740.0076
VAL 750.0074
ASP 760.0092
LEU 770.0107
LYS 780.0090
ILE 790.0072
THR 800.0096
SER 810.0098
PRO 820.0088
THR 830.0125
THR 840.0137
GLU 850.0116
ASP 860.0077
THR 870.0096
ALA 880.0120
THR 890.0101
TYR 900.0091
PHE 910.0083
CYS 920.0086
CYS 920.0086
ALA 930.0072
ARG 940.0054
TYR 950.0059
TYR 960.0064
TYR 960.0063
ALA 970.0066
GLY 980.0077
SER 990.0076
ASP 1000.0080
ILE 1010.0056
ILE 1010.0056
TRP 1020.0062
GLY 1030.0066
PRO 1040.0094
GLY 1050.0108
THR 1060.0120
LEU 1070.0126
LEU 1070.0126
VAL 1080.0098
THR 1090.0070
VAL 1100.0077
SER 1110.0121
SER 1120.0177
ALA 1130.0098
SER 1140.0081
THR 1150.0060
LYS 1160.0076
GLY 1170.0062
PRO 1180.0063
SER 1190.0082
VAL 1200.0065
PHE 1210.0045
PRO 1220.0033
LEU 1230.0046
ALA 1240.0056
PRO 1250.0053
SER 1260.0056
GLY 1330.0038
THR 1340.0035
THR 1340.0035
ALA 1350.0041
ALA 1360.0041
LEU 1370.0042
GLY 1380.0042
CYS 1390.0050
CYS 1390.0050
LEU 1400.0049
VAL 1410.0047
LYS 1420.0048
ASP 1430.0060
TYR 1440.0067
PHE 1450.0075
PRO 1460.0064
GLU 1470.0067
GLU 1470.0067
PRO 1480.0075
VAL 1490.0081
THR 1500.0107
VAL 1510.0053
SER 1520.0042
TRP 1530.0029
ASN 1540.0036
SER 1550.0045
GLY 1560.0030
ALA 1570.0010
LEU 1580.0007
THR 1590.0030
SER 1600.0022
SER 1600.0022
GLY 1610.0021
VAL 1620.0026
HIS 1630.0022
THR 1640.0034
PHE 1650.0054
PRO 1660.0084
ALA 1670.0084
VAL 1680.0122
VAL 1680.0122
LEU 1690.0172
GLN 1700.0204
SER 1710.0281
SER 1720.0261
GLY 1730.0214
LEU 1740.0139
TYR 1750.0088
SER 1760.0073
SER 1760.0073
LEU 1770.0050
SER 1780.0041
SER 1780.0041
SER 1790.0032
VAL 1800.0028
VAL 1810.0026
THR 1820.0022
VAL 1830.0024
PRO 1840.0035
SER 1850.0040
SER 1850.0040
SER 1860.0052
SER 1870.0043
LEU 1880.0046
GLY 1890.0065
THR 1900.0120
GLN 1910.0087
GLN 1910.0087
THR 1920.0079
TYR 1930.0042
ILE 1940.0052
CYS 1950.0051
CYS 1950.0051
ASN 1960.0057
VAL 1970.0069
ASN 1980.0112
ASN 1980.0112
HIS 1990.0105
LYS 2000.0133
PRO 2010.0099
SER 2020.0120
ASN 2030.0160
THR 2040.0119
LYS 2050.0126
VAL 2060.0078
ASP 2070.0055
LYS 2080.0068
LYS 2090.0065
VAL 2100.0052
GLU 2110.0047
PRO 2120.0076
LYS 2130.0111
SER 2140.0215

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elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.