CNRS Nantes University US2B US2B
home |  start a new run |  job status |  references&downloads |  examples |  help  

Should you encounter any unexpected behaviour,
please let us know.
 elNémo has been relocated.
**Some cleaning from time to time**
Sorry for the inconvenience.


***  7D9Z Crystal structure of anti-basigin Fab fragment  ***

<R2> analysis for 2608161417401737521

---  normal mode 36  ---

This page gives a visualization of the normalized mean square displacement <R2> of all C-alpha atoms in the protein that are associated to this mode (black bars). The three components of the corresponding eigenvector are shown on the left (colored bars). Here is the raw data for <R2> and for the eigenvector (shift-click on the links for download).

XYZresidue<R2><R2>max = 0.0432
ALA 10.0266
ASP 20.0167
VAL 30.0127
VAL 40.0099
MET 50.0067
THR 60.0086
GLN 70.0028
THR 80.0043
PRO 90.0071
SER 100.0103
SER 100.0103
SER 110.0093
VAL 120.0086
VAL 120.0085
SER 130.0085
SER 130.0084
ALA 140.0085
ALA 150.0076
VAL 160.0077
GLY 170.0111
GLY 180.0116
THR 190.0073
VAL 200.0071
THR 210.0076
THR 210.0077
ILE 220.0041
ASN 230.0022
CYS 240.0028
CYS 240.0028
GLN 250.0079
GLN 250.0076
ALA 260.0078
SER 270.0129
GLN 280.0124
SER 290.0072
ILE 300.0066
SER 310.0040
SER 310.0040
ALA 320.0057
TYR 330.0055
LEU 340.0046
ALA 350.0052
TRP 360.0053
TYR 370.0035
GLN 380.0029
GLN 390.0021
LYS 400.0023
PRO 410.0039
GLY 420.0052
GLN 430.0030
PRO 440.0010
PRO 450.0015
LYS 460.0028
LEU 470.0044
LEU 480.0048
ILE 490.0066
ILE 490.0065
TYR 500.0071
ASP 510.0080
ALA 520.0074
SER 530.0084
ASP 540.0089
LEU 550.0080
ALA 560.0072
SER 570.0072
SER 570.0072
GLY 580.0037
VAL 590.0047
SER 600.0057
SER 610.0061
ARG 620.0070
PHE 630.0067
LYS 640.0062
GLY 650.0069
SER 660.0074
GLY 670.0077
SER 680.0051
GLY 690.0035
THR 700.0066
GLN 710.0062
PHE 720.0051
THR 730.0054
LEU 740.0051
THR 750.0049
ILE 760.0065
SER 770.0076
SER 770.0076
ASP 780.0078
LEU 790.0068
GLU 800.0054
CYS 810.0035
ALA 820.0035
ASP 830.0025
ALA 840.0006
ALA 850.0026
THR 860.0035
TYR 870.0036
TYR 880.0037
CYS 890.0035
CYS 890.0035
GLN 900.0035
THR 910.0018
TYR 920.0057
TYR 930.0072
ALA 940.0183
ILE 950.0107
ILE 960.0142
THR 970.0216
TYR 980.0163
GLY 990.0101
ALA 1000.0057
ALA 1010.0037
PHE 1020.0021
GLY 1030.0040
GLY 1040.0041
GLY 1050.0046
THR 1060.0063
GLU 1070.0059
GLU 1070.0059
VAL 1080.0047
VAL 1090.0043
VAL 1100.0024
LYS 1110.0037
ARG 1120.0093
THR 1130.0138
VAL 1140.0164
ALA 1150.0135
ALA 1160.0105
PRO 1170.0097
SER 1180.0066
SER 1180.0066
VAL 1190.0073
PHE 1200.0081
ILE 1210.0017
PHE 1220.0026
PRO 1230.0028
PRO 1240.0033
SER 1250.0032
ASP 1260.0041
GLU 1270.0035
GLN 1280.0026
LEU 1290.0016
LYS 1300.0016
SER 1310.0018
GLY 1320.0042
THR 1330.0039
ALA 1340.0043
SER 1350.0058
VAL 1360.0033
VAL 1370.0021
CYS 1380.0018
LEU 1390.0030
LEU 1400.0033
ASN 1410.0020
ASN 1420.0057
ASN 1420.0057
PHE 1430.0087
TYR 1440.0107
PRO 1450.0145
ARG 1460.0137
GLU 1470.0143
ALA 1480.0081
LYS 1490.0055
VAL 1500.0053
GLN 1510.0074
TRP 1520.0072
LYS 1530.0072
VAL 1540.0072
ASP 1550.0071
ASN 1560.0079
ALA 1570.0083
LEU 1580.0094
GLN 1590.0091
SER 1600.0118
GLY 1610.0122
ASN 1620.0103
SER 1630.0088
GLN 1640.0082
GLU 1650.0072
SER 1660.0061
SER 1660.0062
VAL 1670.0064
VAL 1670.0064
THR 1680.0055
GLU 1690.0057
GLU 1690.0056
GLN 1700.0054
ASP 1710.0045
SER 1720.0052
LYS 1730.0048
ASP 1740.0055
CYS 1750.0060
THR 1760.0072
TYR 1770.0077
SER 1780.0047
LEU 1790.0049
SER 1800.0040
SER 1810.0056
THR 1820.0060
LEU 1830.0063
THR 1840.0077
LEU 1850.0061
SER 1860.0053
LYS 1870.0047
ALA 1880.0048
ASP 1890.0051
TYR 1900.0040
GLU 1910.0033
LYS 1920.0042
HIS 1930.0054
LYS 1940.0083
LYS 1940.0083
VAL 1950.0078
TYR 1960.0056
ALA 1970.0058
CYS 1980.0059
CYS 1980.0059
GLU 1990.0057
VAL 2000.0061
THR 2010.0063
HIS 2020.0088
GLN 2030.0118
GLY 2040.0138
LEU 2050.0218
SER 2060.0411
SER 2070.0422
PRO 2080.0160
VAL 2090.0134
THR 2100.0090
LYS 2110.0058
SER 2120.0058
PHE 2130.0061
ASN 2140.0108
ARG 2150.0092
GLY 2160.0116
GLU 2170.0180
SER 20.0176
VAL 30.0130
GLU 40.0125
GLU 50.0018
SER 60.0020
GLY 70.0050
GLY 80.0156
ARG 90.0181
LEU 100.0160
VAL 110.0228
THR 120.0236
PRO 130.0196
GLY 140.0265
THR 150.0273
PRO 160.0221
LEU 170.0116
THR 180.0075
LEU 190.0086
THR 200.0097
CYS 210.0067
THR 220.0125
VAL 230.0195
SER 240.0304
GLY 250.0368
PHE 260.0268
SER 270.0185
LEU 280.0080
SER 290.0118
SER 290.0119
ASP 300.0200
TYR 310.0157
ALA 320.0085
MET 330.0033
SER 340.0032
TRP 350.0043
VAL 360.0043
ARG 370.0043
GLN 380.0065
ALA 390.0097
PRO 400.0115
GLY 410.0139
LYS 420.0132
GLY 430.0094
LEU 440.0039
GLU 450.0045
TRP 460.0051
ILE 470.0055
GLY 480.0070
ILE 490.0084
ILE 500.0128
TYR 510.0168
ALA 520.0209
SER 530.0398
GLY 540.0318
SER 550.0289
THR 560.0153
THR 560.0153
TYR 570.0109
TYR 580.0069
ALA 590.0052
SER 600.0057
TRP 610.0066
ALA 620.0046
LYS 630.0051
GLY 640.0093
ARG 650.0064
PHE 660.0049
THR 670.0063
ILE 680.0130
SER 690.0150
LYS 700.0128
THR 710.0203
SER 720.0166
THR 730.0192
THR 740.0119
VAL 750.0076
ASP 760.0117
LEU 770.0062
LYS 780.0047
ILE 790.0051
THR 800.0134
SER 810.0178
PRO 820.0135
THR 830.0117
THR 840.0047
GLU 850.0044
ASP 860.0035
THR 870.0075
ALA 880.0094
THR 890.0075
TYR 900.0046
PHE 910.0030
CYS 920.0026
CYS 920.0027
ALA 930.0055
ARG 940.0102
TYR 950.0062
TYR 960.0113
TYR 960.0113
ALA 970.0110
GLY 980.0082
SER 990.0065
ASP 1000.0082
ILE 1010.0118
ILE 1010.0118
TRP 1020.0074
GLY 1030.0084
PRO 1040.0033
GLY 1050.0043
THR 1060.0056
LEU 1070.0138
LEU 1070.0138
VAL 1080.0120
THR 1090.0120
VAL 1100.0123
SER 1110.0141
SER 1120.0182
ALA 1130.0166
SER 1140.0107
THR 1150.0064
LYS 1160.0048
GLY 1170.0077
PRO 1180.0105
SER 1190.0097
VAL 1200.0100
PHE 1210.0097
PRO 1220.0088
LEU 1230.0082
ALA 1240.0083
PRO 1250.0161
SER 1260.0154
GLY 1330.0381
THR 1340.0235
THR 1340.0232
ALA 1350.0262
ALA 1360.0151
LEU 1370.0133
GLY 1380.0135
CYS 1390.0099
CYS 1390.0099
LEU 1400.0088
VAL 1410.0082
LYS 1420.0098
ASP 1430.0088
TYR 1440.0072
PHE 1450.0103
PRO 1460.0100
GLU 1470.0099
GLU 1470.0099
PRO 1480.0067
VAL 1490.0095
THR 1500.0158
VAL 1510.0141
SER 1520.0154
TRP 1530.0142
ASN 1540.0130
SER 1550.0194
GLY 1560.0254
ALA 1570.0212
LEU 1580.0214
THR 1590.0290
SER 1600.0300
SER 1600.0301
GLY 1610.0231
VAL 1620.0167
HIS 1630.0048
THR 1640.0040
PHE 1650.0015
PRO 1660.0042
ALA 1670.0054
VAL 1680.0089
VAL 1680.0089
LEU 1690.0119
GLN 1700.0172
SER 1710.0231
SER 1720.0219
GLY 1730.0163
LEU 1740.0105
TYR 1750.0052
SER 1760.0076
SER 1760.0076
LEU 1770.0083
SER 1780.0052
SER 1780.0052
SER 1790.0064
VAL 1800.0074
VAL 1810.0146
THR 1820.0142
VAL 1830.0112
PRO 1840.0262
SER 1850.0373
SER 1850.0373
SER 1860.0432
SER 1870.0229
LEU 1880.0205
GLY 1890.0217
THR 1900.0236
GLN 1910.0168
GLN 1910.0168
THR 1920.0101
TYR 1930.0083
ILE 1940.0085
CYS 1950.0131
CYS 1950.0131
ASN 1960.0153
VAL 1970.0149
ASN 1980.0161
ASN 1980.0161
HIS 1990.0110
LYS 2000.0098
PRO 2010.0056
SER 2020.0086
ASN 2030.0141
THR 2040.0157
LYS 2050.0174
VAL 2060.0145
ASP 2070.0152
LYS 2080.0111
LYS 2090.0096
VAL 2100.0107
GLU 2110.0165
PRO 2120.0137
LYS 2130.0100
SER 2140.0069

If you find results from this site helpful for your research, please cite one of our papers:

elNémo is maintained by Yves-Henri Sanejouand.
It was developed by Karsten Suhre.
Between 2003 and 2014, it was hosted by IGS (Marseille).
Between 2015 and 2025, it was hosted by US2B (Nantes).
Last modification: april 24th, 2026.